Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr07 97507971 
Parameters: 2 7 7 80 10 50 1000
Length:  97507971

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   

This is table  16  of  328  ( 39316 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4861912--4861965
21
2.5
22
87
3
74
14
3
44
37
1.63
4861919--4861965
22
2.2
21
88
3
67
14
4
46
34
1.64
4861878--4862011
7
18.7
7
73
4
61
20
1
35
41
1.62
4862670--4862703
16
2.1
16
89
10
52
41
0
0
58
0.98
4862727--4862760
18
1.9
18
88
5
52
50
2
2
44
1.32
4866412--4866464
22
2.4
23
81
12
67
28
3
22
45
1.70
4867454--4867577
43
2.9
43
88
0
167
26
18
29
25
1.98
4868603--4868673
21
3.4
21
84
3
72
4
49
18
28
1.66
4868616--4868686
21
3.4
21
76
3
72
2
47
19
29
1.64
4874166--4874309
9
16.0
9
70
12
82
36
0
15
47
1.51
4874203--4874309
18
5.8
18
72
12
92
36
0
15
46
1.53
4877983--4878118
7
19.6
7
68
13
57
46
30
1
21
1.60
4877987--4878037
14
3.6
14
83
0
66
39
39
3
17
1.68
4878047--4878118
34
2.1
35
84
7
94
51
26
0
22
1.48
4881318--4881358
16
2.6
16
96
0
73
48
29
0
21
1.50
4882008--4882092
41
2.1
41
91
8
140
24
18
17
38
1.92
4887493--4887536
17
2.7
16
80
13
54
29
0
4
65
1.12
4888490--4888527
2
19.5
2
83
5
51
50
2
2
44
1.30
4889594--4889633
13
2.8
13
88
11
53
42
2
7
47
1.45
4905731--4905817
43
2.0
44
88
2
131
36
20
19
22
1.95
4906312--4906412
42
2.4
42
81
1
112
40
20
18
19
1.92
4906892--4906917
11
2.4
11
100
0
52
46
34
0
19
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4909717--4909761
16
2.8
16
81
18
58
55
0
0
44
0.99
4914044--4914075
3
10.7
3
100
0
64
65
0
34
0
0.93
4916809--4916850
19
2.2
20
91
4
68
33
0
0
66
0.92
4919080--4919176
13
8.2
13
73
21
88
39
47
0
13
1.43
4919074--4919166
22
4.1
22
80
12
100
37
48
0
13
1.43
4919758--4919795
17
2.2
17
86
9
51
34
5
0
60
1.19
4920619--4920703
23
3.6
23
67
10
55
57
2
9
30
1.43
4920649--4920730
33
2.3
38
81
12
93
51
0
13
35
1.41
4920715--4920758
9
4.8
9
80
5
52
68
2
2
27
1.14
4921120--4921180
22
2.8
22
90
5
88
13
0
52
34
1.40
4922098--4922155
3
19.0
3
82
3
71
29
1
1
67
1.11
4922127--4922220
39
2.6
39
80
9
101
35
11
1
52
1.45
4924303--4924360
28
2.1
28
100
0
116
36
17
6
39
1.76
4924814--4924855
22
1.9
22
85
9
59
42
11
30
14
1.81
4925010--4925052
21
2.0
22
86
13
63
83
0
11
4
0.78
4928791--4928829
17
2.2
17
86
4
51
25
0
2
71
0.98
4930747--4930785
19
2.1
19
85
0
51
43
2
5
48
1.38
4934117--4934165
13
3.3
16
67
21
52
44
0
14
40
1.45
4934112--4934170
28
2.1
29
96
3
111
42
0
13
44
1.44
4937172--4937228
9
6.2
9
74
9
53
61
3
1
33
1.23
4937940--4937979
21
1.9
21
85
10
55
52
0
0
47
1.00
4949911--4949963
13
4.1
13
78
7
54
43
7
1
47
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4952361--4952411
22
2.3
23
82
6
68
52
17
3
25
1.61
4956012--4956062
2
26.5
2
86
7
61
49
5
0
45
1.26
4956316--4956376
10
6.3
10
73
7
54
63
0
0
36
0.94
4956316--4956372
29
2.0
29
86
3
80
64
0
0
35
0.93
4956320--4956377
19
3.0
20
77
5
66
67
0
0
32
0.91
4956367--4956410
17
2.6
18
85
10
65
54
4
2
38
1.33
4956329--4956382
26
2.0
27
86
13
76
62
0
0
37
0.95
4956663--4956735
19
3.9
18
77
12
76
31
2
4
61
1.29
4956710--4956801
38
2.4
38
75
7
98
31
3
2
63
1.23
4956815--4957022
89
2.3
88
84
5
267
33
9
20
36
1.85
4959025--4959733
355
2.0
355
98
0
1364
29
20
18
32
1.96
4963708--4963737
14
2.1
14
93
0
51
16
13
36
33
1.88
4974661--4974708
17
2.8
17
78
6
53
8
8
4
79
1.06
4983876--4984023
40
3.7
39
75
9
138
31
22
20
25
1.98
4984722--4984810
7
12.3
7
72
7
52
24
1
40
33
1.63
4984707--4984785
29
2.8
28
84
9
97
26
1
36
35
1.65
4985199--4985273
26
2.9
27
88
4
109
44
6
4
45
1.48
4985386--4985420
17
2.0
17
88
5
52
34
0
0
65
0.93
4985855--4985888
13
2.6
13
85
0
50
26
35
0
38
1.57
4989525--4989641
9
12.3
9
75
10
108
44
22
0
32
1.59
4989531--4989606
39
1.9
39
97
0
143
46
21
0
32
1.52
4989527--4989639
57
2.0
57
87
0
163
45
23
0
30
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4995644--4995749
43
2.5
43
76
3
124
20
26
16
36
1.93
5006734--5006957
44
5.1
44
88
0
286
24
30
14
30
1.95
5006944--5007398
132
3.5
132
95
0
813
27
24
17
30
1.97
5006944--5007386
44
10.1
44
75
9
370
27
24
17
30
1.97
5007425--5007735
68
4.6
68
87
0
426
28
22
23
26
1.99
5007903--5008518
43
14.1
45
73
11
422
20
21
21
36
1.96
5007921--5008530
132
4.6
132
88
3
892
20
21
22
36
1.95
5008010--5008472
44
10.6
44
71
10
252
20
22
21
36
1.95
5009855--5009896
8
5.6
8
86
13
63
0
0
19
80
0.70
5009850--5009903
13
3.8
14
88
11
83
0
0
16
83
0.65
5009900--5009935
6
6.0
6
100
0
72
0
33
16
50
1.46
5011445--5011664
46
5.0
46
82
10
253
21
23
15
39
1.91
5011577--5011652
38
2.0
38
100
0
152
21
26
18
34
1.96
5013799--5013850
11
4.7
11
76
9
52
63
3
0
32
1.12
5019132--5019193
26
2.3
27
75
13
65
59
8
4
27
1.46
5019142--5019205
26
2.6
25
72
16
60
62
9
3
25
1.40
5021434--5021463
2
15.0
2
100
0
60
50
0
0
50
1.00
5021948--5021996
20
2.4
21
73
10
57
59
0
8
32
1.27
5022362--5022639
18
15.1
18
73
10
186
35
11
15
37
1.85
5022362--5022536
72
2.4
72
83
7
212
35
11
15
37
1.83
5023812--5023850
13
3.1
12
82
10
51
25
2
2
69
1.14
5023655--5023941
157
1.9
152
84
6
389
27
6
7
57
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5024513--5024575
30
2.1
31
82
8
76
49
1
3
46
1.27
5025659--5025701
2
22.0
2
90
4
70
48
2
0
48
1.14
5031285--5031316
14
2.3
14
100
0
64
37
12
18
31
1.88
5039206--5039239
15
2.3
15
100
0
68
20
11
26
41
1.87
5040143--5040191
24
2.0
24
84
7
64
18
8
32
40
1.80
5046339--5046480
69
2.0
70
98
1
277
41
9
7
41
1.65
5047918--5048001
33
2.4
35
78
5
100
19
28
16
35
1.93
5051846--5052015
84
2.0
84
87
2
243
44
15
11
27
1.82
5074718--5074778
29
2.1
29
100
0
122
47
3
9
39
1.53
5083898--5083942
22
2.0
23
87
8
67
15
17
6
60
1.56
5084465--5084513
25
2.0
25
88
8
73
34
0
6
59
1.22
5085459--5085492
9
3.8
9
88
0
50
32
0
0
67
0.91
5099272--5099327
28
2.0
28
100
0
112
42
10
14
32
1.80
5105887--5105918
5
6.4
5
100
0
64
18
21
40
18
1.91
5108564--5108648
42
2.0
42
95
0
152
41
12
14
31
1.83
5112988--5113057
35
2.0
35
100
0
140
42
17
5
34
1.73
5115091--5115440
188
1.9
188
84
1
477
40
20
18
21
1.91
5124538--5124562
7
3.6
7
100
0
50
84
0
0
16
0.63
5131711--5131747
14
2.7
14
87
4
58
40
13
0
45
1.43
5133928--5133984
30
2.0
28
86
6
78
68
3
0
28
1.06
5134391--5134435
23
1.9
24
81
4
56
31
13
4
51
1.61
5136727--5136756
3
10.0
3
100
0
60
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5139298--5139357
3
20.0
3
100
0
120
33
0
0
66
0.92
5143445--5143502
23
2.5
22
78
13
62
27
5
3
63
1.31
5154807--5154833
13
2.1
13
100
0
54
55
0
14
29
1.40
5156407--5156435
2
14.5
2
100
0
58
51
0
48
0
1.00
5158604--5158852
63
4.0
63
96
0
444
19
22
16
42
1.89
5170007--5170037
16
1.9
16
93
0
53
35
3
0
61
1.12
5181235--5181270
17
2.1
17
100
0
72
55
11
27
5
1.57
5187442--5187489
18
2.6
17
81
12
51
64
2
2
31
1.16
5188504--5188573
13
5.4
13
74
6
70
71
4
1
22
1.12
5188790--5188839
25
2.0
25
88
0
73
36
22
12
30
1.90

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328