Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: A05 Parameters: 2 7 7 80 10 50 1000 Length: 100714657

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   

This is table  233  of  318  ( 38109 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74097760--74097803
16
2.8
16
86
10
56
34
18
2
45
1.62
74102547--74102582
16
2.2
17
90
5
56
25
5
0
69
1.10
74102644--74102681
20
1.9
20
88
0
58
36
13
13
36
1.83
74112071--74112342
39
7.0
39
94
0
463
23
28
25
22
1.99
74117949--74118219
39
6.9
39
91
0
425
23
27
25
22
2.00
74135754--74135792
19
2.1
18
85
4
51
76
0
2
20
0.90
74137878--74138093
40
5.4
40
90
1
328
26
27
21
24
1.99
74142533--74142578
24
1.9
24
82
8
58
8
17
26
47
1.76
74147194--74147258
18
3.4
18
71
22
60
46
9
9
35
1.68
74147179--74147259
40
2.0
40
97
0
153
43
7
11
38
1.68
74147179--74147240
18
3.0
22
69
26
71
43
6
11
38
1.66
74156288--74156819
47
11.2
47
91
2
812
31
8
30
29
1.86
74156288--74156819
96
5.6
94
92
1
821
31
8
30
29
1.86
74156288--74156819
143
3.7
143
92
1
852
31
8
30
29
1.86
74158842--74159070
43
5.3
43
97
0
422
23
16
34
26
1.95
74161368--74161485
40
3.0
40
89
2
166
27
19
28
24
1.99
74161420--74161618
40
5.0
40
77
8
156
23
21
29
25
1.99
74165150--74165681
47
11.2
47
91
2
821
31
8
30
29
1.86
74165150--74165681
96
5.6
94
92
1
830
31
8
30
29
1.86
74165150--74165681
143
3.7
143
92
1
861
31
8
30
29
1.86
74167702--74167930
43
5.3
43
97
0
422
23
16
34
26
1.95
74170232--74170349
40
3.0
40
89
2
166
27
19
28
24
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74170284--74170482
40
5.0
40
77
8
156
23
21
29
25
1.99
74174016--74174547
47
11.2
47
90
2
812
31
8
30
29
1.86
74174016--74174547
96
5.6
94
92
1
821
31
8
30
29
1.86
74174016--74174547
143
3.7
143
91
1
852
31
8
30
29
1.86
74182797--74182866
25
2.8
25
88
0
95
27
17
24
31
1.97
74182789--74182866
25
3.2
24
83
7
86
26
16
21
34
1.95
74183070--74183287
27
8.1
27
93
1
312
25
19
20
34
1.96
74183328--74183466
27
5.2
27
88
1
208
31
8
20
39
1.83
74183312--74183466
54
2.9
53
85
2
211
32
9
18
39
1.82
74183417--74183736
27
11.9
27
85
0
336
39
6
21
32
1.80
74183605--74183856
27
9.4
27
78
8
167
32
9
21
36
1.86
74183443--74183861
81
5.2
81
81
3
328
36
7
20
34
1.81
74183687--74183861
79
2.2
81
89
3
264
29
9
21
39
1.85
74186202--74186290
25
3.6
25
93
0
151
26
22
22
28
1.99
74186195--74186290
50
1.9
51
93
2
167
29
21
21
27
1.99
74186493--74186708
27
8.0
27
86
2
263
24
21
20
33
1.97
74186712--74186798
27
3.2
27
78
3
95
31
8
18
42
1.79
74186766--74186841
38
2.0
38
82
5
91
39
9
11
39
1.74
74186804--74186903
27
3.7
27
91
0
155
34
10
19
37
1.85
74186883--74187173
27
10.8
27
83
0
249
41
7
20
29
1.80
74186880--74187173
54
5.4
54
83
1
302
41
7
21
29
1.80
74187184--74187322
27
5.2
26
80
8
163
28
10
20
39
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74187135--74187329
81
2.4
83
85
5
263
30
11
21
36
1.88
74187184--74187322
54
2.6
53
81
10
183
28
10
20
39
1.86
74190651--74190699
23
2.3
21
80
20
57
65
0
6
28
1.16
74190667--74190696
14
2.1
15
93
6
53
66
0
6
26
1.16
74190735--74190899
4
41.8
4
70
12
92
70
2
6
20
1.21
74190798--74190901
41
2.5
42
86
6
133
71
2
6
19
1.22
74192113--74192141
13
2.1
14
93
6
51
20
6
13
58
1.58
74193572--74193630
30
2.0
30
82
0
73
44
8
23
23
1.81
74205968--74206001
2
17.0
2
93
0
59
52
0
47
0
1.00
74212338--74212489
27
5.6
27
91
3
223
27
13
28
29
1.94
74212335--74212489
55
2.8
55
92
0
238
27
14
29
29
1.95
74220443--74220593
27
5.6
27
91
4
223
27
13
29
29
1.94
74220443--74220593
82
1.9
81
88
4
232
27
13
29
29
1.94
74227357--74227465
26
4.2
26
92
0
182
34
23
7
33
1.83
74234444--74234552
26
4.2
26
90
0
164
35
22
6
35
1.80
74236616--74236676
30
2.0
30
83
0
77
31
22
8
37
1.84
74238497--74238569
36
2.0
36
100
0
146
31
19
16
32
1.94
74241096--74241156
30
2.0
30
83
0
77
31
22
8
37
1.84
74243425--74243475
19
2.8
18
77
13
59
60
0
0
39
0.97
74246702--74246740
19
2.1
18
85
4
51
66
7
2
23
1.30
74249479--74249809
159
2.1
159
90
2
522
28
25
20
25
1.99
74251207--74251288
43
1.9
43
89
0
128
34
28
15
21
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74256343--74256501
44
3.7
43
76
16
159
23
18
27
30
1.97
74256343--74256501
43
3.7
43
75
13
157
23
18
27
30
1.97
74262183--74262212
10
3.0
10
90
0
51
56
3
0
40
1.16
74263317--74264057
371
2.0
370
97
0
1401
26
19
19
34
1.96
74270571--74270610
14
2.8
14
88
11
55
75
0
17
7
1.03
74270571--74270610
15
2.7
16
88
11
59
75
0
17
7
1.03
74270610--74270637
14
2.0
14
100
0
56
42
0
35
21
1.53
74278417--74278588
93
1.8
93
93
0
299
27
30
20
20
1.98
74278409--74278584
46
3.8
46
78
10
205
28
29
20
21
1.98
74283313--74283359
19
2.5
19
92
0
85
10
36
23
29
1.89
74284903--74284985
43
1.9
43
90
0
130
31
31
18
19
1.95
74302977--74303082
25
4.3
25
69
7
90
31
17
29
21
1.97
74303028--74303181
24
6.3
24
67
12
89
35
19
25
20
1.96
74302971--74303155
74
2.5
74
90
3
277
34
17
26
22
1.96
74303152--74303234
25
3.4
25
79
14
84
33
19
25
21
1.97
74303096--74303271
74
2.4
75
77
4
171
36
18
23
21
1.95
74309770--74309800
9
3.6
9
95
4
55
54
0
0
45
0.99
74310825--74310869
23
2.0
23
82
8
56
53
4
2
40
1.33
74329724--74329749
5
5.2
5
100
0
52
80
0
0
19
0.71
74331401--74331466
21
3.1
21
65
16
55
21
13
36
28
1.91
74333619--74333648
5
6.0
5
100
0
60
60
0
0
40
0.97
74335083--74335176
38
2.5
37
81
3
109
25
7
25
41
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74336103--74336197
46
2.1
46
100
0
190
42
13
8
35
1.75
74336432--74336472
20
2.0
20
100
0
82
34
19
9
36
1.85
74340036--74340085
26
1.9
26
95
0
91
18
18
24
40
1.91
74357987--74358303
46
6.7
47
74
13
192
23
29
19
27
1.98
74359772--74359830
27
2.2
27
87
0
82
35
3
8
52
1.49
74360910--74360949
21
1.9
21
89
0
62
17
32
32
17
1.93
74373137--74373267
46
2.9
43
77
14
129
40
19
10
29
1.85
74373137--74373267
45
2.9
46
77
5
140
40
19
10
29
1.85
74375302--74375331
16
1.9
15
93
6
51
33
23
0
43
1.54
74375543--74375818
50
5.5
50
80
4
297
31
26
16
25
1.97
74375592--74375773
101
1.8
101
91
0
301
29
24
18
27
1.98
74375543--74375818
101
2.8
101
81
3
290
31
26
16
25
1.97
74377377--74377520
43
3.3
43
80
3
148
35
22
15
26
1.94
74379276--74379316
9
4.6
9
87
0
64
46
21
7
24
1.77
74379336--74379370
6
5.5
6
87
12
52
14
0
2
82
0.77
74380537--74380595
31
1.9
30
83
10
75
40
0
1
57
1.09
74387101--74387125
13
1.9
13
100
0
50
16
36
40
8
1.77
74398722--74399024
40
7.6
40
89
2
405
27
27
20
24
1.99
74407515--74407541
4
6.8
4
100
0
54
77
0
0
22
0.76
74407571--74407630
13
4.7
13
68
4
50
15
50
15
20
1.79
74407543--74407632
38
2.4
38
100
0
180
16
48
13
21
1.80
74407711--74407772
27
2.3
27
97
0
115
6
0
29
64
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74408083--74408161
9
8.6
9
72
15
54
26
3
1
68
1.14
74408081--74408132
15
3.6
14
76
7
50
23
1
0
75
0.91
74408091--74408170
12
6.6
12
75
12
74
30
3
1
65
1.18
74408487--74408561
3
25.0
3
94
0
114
28
0
4
68
1.08
74408492--74408586
27
3.4
27
86
5
93
24
1
6
68
1.19
74410090--74410132
21
2.0
21
82
8
52
23
25
32
18
1.97
74420030--74420065
18
2.0
18
88
0
54
52
2
8
36
1.46
74422097--74422163
30
2.2
30
80
17
75
46
2
7
43
1.47
74424425--74424500
37
2.1
36
80
7
82
34
3
3
57
1.35
74429338--74429390
24
2.3
23
83
6
63
30
28
9
32
1.88

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318