Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_A07 Parameters: 2 7 7 80 10 50 1000 Length: 92880876

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   

This is table  283  of  290  ( 34756 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90516906--90516936
16
1.9
16
93
0
53
29
6
16
48
1.70
90522445--90522496
27
1.9
27
96
0
95
13
25
32
28
1.93
90522367--90522739
105
3.6
105
94
1
624
19
20
29
30
1.97
90522550--90522601
27
1.9
27
96
0
95
13
25
32
28
1.93
90525279--90525317
2
19.5
2
100
0
78
51
0
0
48
1.00
90527322--90527364
2
22.0
2
90
4
70
48
0
0
51
1.00
90527604--90527629
7
3.7
7
100
0
52
26
0
0
73
0.84
90538734--90538796
27
2.3
27
81
5
83
41
34
6
17
1.75
90539296--90539329
18
1.9
17
88
5
50
32
20
0
47
1.51
90539710--90539739
12
2.5
12
94
0
51
0
36
3
60
1.14
90539864--90539944
41
2.0
40
83
9
101
33
4
1
60
1.26
90539868--90539944
14
5.6
14
73
13
61
33
5
1
59
1.28
90540962--90540996
17
2.0
18
88
5
54
51
5
2
40
1.40
90558297--90558337
21
2.0
21
100
0
82
39
4
26
29
1.77
90559369--90559400
13
2.5
13
94
0
55
21
25
31
21
1.98
90565573--90565597
11
2.3
11
100
0
50
16
24
0
60
1.36
90567708--90567762
21
2.7
21
83
8
60
27
27
34
10
1.90
90568383--90568422
21
2.0
20
85
5
53
70
2
7
20
1.24
90570151--90570224
27
2.8
26
68
15
62
71
8
2
17
1.22
90570190--90570219
16
1.9
15
93
6
51
80
6
0
13
0.91
90577699--90577743
21
2.2
20
84
4
54
31
17
22
28
1.97
90577859--90578001
73
2.0
73
95
0
259
22
24
22
30
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90578646--90578684
3
13.0
3
100
0
78
0
33
0
66
0.92
90578799--90578868
30
2.3
31
85
7
90
17
10
22
50
1.76
90589234--90589267
17
1.9
18
94
5
61
61
0
0
38
0.96
90592075--90592103
6
4.8
6
100
0
58
17
17
48
17
1.82
90593421--90593453
12
2.7
13
90
9
52
51
0
48
0
1.00
90594359--90594400
21
2.0
21
90
0
66
28
0
0
71
0.86
90594375--90594405
16
1.9
16
93
0
53
22
0
0
77
0.77
90596059--90596153
41
2.3
41
83
3
111
26
18
18
35
1.95
90596198--90596303
43
2.5
43
81
6
124
23
17
22
35
1.95
90603857--90603967
42
2.6
42
88
0
150
29
23
14
32
1.94
90603940--90604061
47
2.6
47
81
1
138
31
25
13
29
1.94
90604087--90604204
31
3.8
31
87
4
175
26
27
20
26
1.99
90604180--90604301
50
2.6
45
81
13
124
26
21
16
36
1.94
90604198--90604299
50
2.0
50
92
0
168
26
20
14
38
1.91
90607755--90607806
27
1.9
27
84
0
68
51
19
0
28
1.47
90613662--90613692
14
2.2
14
100
0
62
29
19
16
35
1.93
90616546--90616604
25
2.4
25
82
5
66
38
1
8
50
1.43
90621369--90621437
20
3.3
20
74
9
57
47
7
5
39
1.55
90624372--90624423
23
2.3
23
90
6
79
53
3
15
26
1.59
90624371--90624408
12
3.2
12
77
7
51
60
0
15
23
1.35
90625569--90625701
51
2.6
52
80
6
153
30
24
17
28
1.97
90627129--90627243
44
2.6
44
85
2
149
35
13
22
27
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90627129--90627262
46
3.0
45
82
4
153
35
14
23
26
1.93
90634507--90634621
44
2.6
44
85
2
149
35
13
22
27
1.92
90634507--90634640
46
3.0
45
82
4
153
35
14
23
26
1.93
90650252--90650361
10
11.3
10
75
8
66
60
0
6
32
1.28
90650293--90650370
10
8.1
9
73
12
57
57
0
8
33
1.30
90650303--90650370
29
2.3
29
85
5
93
58
0
8
32
1.29
90650270--90650363
39
2.5
38
87
5
136
59
0
7
32
1.25
90651610--90651649
17
2.4
17
91
0
62
52
2
0
45
1.14
90651621--90651702
27
2.9
30
70
18
84
45
4
2
47
1.37
90652082--90652120
21
1.9
21
89
5
62
61
0
2
35
1.10
90657497--90657565
34
2.0
34
100
0
138
23
14
26
36
1.93
90659530--90659577
27
1.9
23
84
16
60
56
14
8
20
1.64
90666328--90666364
18
2.1
18
94
0
65
27
21
16
35
1.94
90665893--90672782
481
14.1
493
82
5
7753
38
16
16
27
1.91
90665893--90677065
479
23.1
481
81
6
12064
38
16
17
28
1.91
90671845--90671883
6
6.7
6
94
5
71
51
17
15
15
1.77
90665893--90677065
979
11.6
975
80
7
11416
38
16
17
28
1.91
90672783--90677065
960
4.4
959
84
3
5379
38
16
17
28
1.91
90675163--90677782
902
2.8
900
75
10
2629
37
16
17
28
1.91
90682477--90682514
17
2.2
17
95
0
67
28
7
28
34
1.85
90687695--90687763
21
3.4
20
71
16
70
55
7
1
36
1.37
90692732--90692781
20
2.6
19
84
9
66
56
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90694015--90694066
26
2.0
26
100
0
104
38
11
23
26
1.89
90696232--90696263
16
2.0
16
100
0
64
50
0
0
50
1.00
90706608--90706681
33
2.2
33
87
0
103
6
8
50
35
1.59
90706734--90706915
48
3.8
48
92
0
274
12
9
49
29
1.71
90706814--90706894
27
3.2
26
66
25
66
13
11
48
27
1.76
90706877--90706945
33
2.1
33
100
0
138
8
5
49
36
1.58
90706925--90706986
27
2.3
27
80
5
72
6
14
54
24
1.63
90708725--90708767
22
1.9
23
95
4
79
23
13
4
58
1.55
90712497--90712529
14
2.4
14
90
5
50
66
0
0
33
0.92
90712583--90712614
16
2.0
16
100
0
64
50
0
0
50
1.00
90715149--90715185
12
3.2
12
88
11
51
62
0
0
37
0.96
90717525--90717630
35
3.2
35
66
17
107
52
10
9
27
1.66
90717502--90717633
65
2.0
66
98
1
257
49
11
10
28
1.72
90718250--90718289
20
2.0
20
90
0
62
50
12
10
27
1.72
90718238--90718304
34
1.9
35
87
3
100
46
11
8
32
1.72
90718273--90718312
14
2.9
14
84
0
53
42
17
7
32
1.77
90718697--90718736
21
1.9
21
85
10
55
27
0
20
52
1.46
90718705--90718783
28
2.8
28
78
3
70
30
2
16
50
1.58
90719260--90719299
22
1.9
21
85
10
55
35
42
5
17
1.71
90721390--90721471
43
1.9
43
89
0
128
24
23
1
51
1.56
90730366--90730399
3
11.3
3
93
0
59
29
35
0
35
1.58
90734290--90734372
43
1.9
44
90
2
132
46
28
7
16
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90750110--90750442
131
2.6
129
86
4
431
35
18
16
28
1.93
90750722--90750828
53
2.0
53
100
0
214
53
20
7
18
1.69
90754422--90754456
18
1.9
18
88
11
54
57
20
2
20
1.54
90758058--90758104
21
2.2
22
92
3
78
21
19
38
21
1.94
90769709--90769776
33
2.1
32
94
2
118
32
25
14
27
1.95
90786682--90786781
38
2.7
37
81
15
109
36
1
8
55
1.36
90786778--90786828
25
2.0
26
82
14
63
31
1
7
58
1.37
90788771--90788846
39
1.9
39
97
0
143
27
18
14
39
1.90
90795725--90795761
17
2.2
17
90
9
58
45
13
5
35
1.66
90800035--90800112
21
3.7
21
84
0
93
39
25
20
14
1.90
90800493--90800534
21
2.0
22
86
13
61
30
23
0
45
1.53
90800590--90800647
15
3.8
15
88
2
89
51
12
0
36
1.39
90802281--90802327
19
2.3
22
79
17
57
38
12
4
44
1.62
90803490--90803528
19
2.2
19
86
9
55
56
2
5
35
1.35
90803605--90803645
20
2.0
20
85
0
55
46
2
17
34
1.61
90803779--90803825
18
2.7
18
87
6
62
59
0
2
38
1.09
90809235--90809461
46
4.9
46
90
1
312
40
14
22
21
1.90
90809722--90809768
25
2.0
25
83
8
62
53
4
14
27
1.60
90816017--90816049
13
2.4
14
90
5
50
12
0
6
81
0.85
90819237--90819262
6
4.3
6
100
0
52
0
0
38
61
0.96
90821189--90821255
30
2.2
29
77
12
73
32
2
8
55
1.46
90825049--90825082
14
2.5
13
86
9
50
47
2
2
47
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90830385--90830589
41
5.0
40
84
8
220
28
19
24
27
1.99
90837993--90838139
41
3.6
41
90
9
205
25
19
25
29
1.99
90837995--90838181
82
2.3
81
81
11
204
27
20
25
27
1.99
90844639--90844709
28
2.5
29
81
6
92
26
2
2
67
1.18
90850534--90850581
19
2.5
19
90
6
71
22
8
10
58
1.58
90851019--90851056
19
2.0
19
100
0
76
31
0
0
68
0.90
90851022--90851057
10
3.7
10
85
7
56
36
0
0
63
0.94
90855111--90855352
103
2.4
100
83
13
298
30
0
14
54
1.46
90855424--90855478
27
2.0
27
85
0
74
32
34
20
12
1.90
90858948--90858977
14
2.2
14
94
5
53
6
10
0
83
0.81

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290