Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A07
Parameters: 2 7 7 80 10 50 1000
Length:  92880876

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   

This is table  286  of  290  ( 34756 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91498788--91498899
5
22.2
5
99
0
215
58
0
0
41
0.98
91500013--91500050
20
1.9
20
94
0
67
34
34
2
28
1.71
91500074--91500165
40
2.3
40
80
0
112
32
23
20
22
1.98
91504563--91504620
25
2.3
25
82
8
64
72
3
6
17
1.21
91505864--91505971
26
4.2
26
95
0
189
30
6
25
37
1.81
91510476--91510518
17
2.4
19
81
11
56
30
2
0
67
1.03
91510476--91510524
17
2.8
18
75
6
55
36
2
0
61
1.08
91510580--91510638
20
2.9
19
85
14
75
59
0
1
38
1.08
91510953--91511021
16
4.2
16
96
3
129
24
0
37
37
1.56
91510953--91511021
33
2.1
32
97
2
129
24
0
37
37
1.56
91511002--91511092
45
2.0
45
85
2
121
27
6
28
37
1.82
91511237--91511291
15
3.4
16
80
16
53
54
1
0
43
1.10
91511243--91511291
16
2.9
18
80
20
61
55
0
0
44
0.99
91511339--91511551
67
3.1
67
66
20
172
46
3
2
47
1.35
91511144--91511465
156
2.1
156
96
0
599
43
3
6
46
1.46
91511413--91511447
18
2.0
17
88
5
52
54
0
0
45
0.99
91511337--91511595
137
1.9
138
91
2
423
45
3
3
47
1.38
91511351--91511629
137
2.0
137
82
5
332
45
5
3
45
1.42
91514816--91515127
145
2.2
145
95
0
561
34
9
8
47
1.67
91515043--91515167
64
2.0
64
95
0
223
31
8
8
51
1.64
91519864--91519914
15
3.6
14
82
10
59
27
0
0
72
0.85
91523617--91523693
33
2.3
33
82
4
84
25
11
41
20
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91525771--91525812
15
2.7
16
82
14
52
61
4
0
33
1.17
91525783--91525814
16
2.1
16
94
5
57
56
6
0
37
1.25
91525880--91526287
114
3.6
113
94
2
687
50
15
0
32
1.51
91526486--91526517
12
2.6
13
90
9
50
0
37
0
62
0.95
91527360--91527408
16
3.0
16
78
3
53
4
6
4
85
0.81
91527360--91527416
18
3.3
18
80
4
64
5
7
3
84
0.87
91527372--91527430
28
2.1
28
90
0
91
10
8
5
76
1.15
91527383--91527446
28
2.3
28
83
5
76
15
10
3
70
1.28
91527495--91527557
33
1.9
32
87
3
90
42
0
3
53
1.16
91527614--91527696
14
5.3
15
70
24
64
39
1
1
57
1.14
91527770--91527819
12
3.7
13
76
23
50
48
0
0
52
1.00
91531497--91531534
17
2.4
17
87
12
55
81
2
2
13
0.90
91531590--91531651
27
2.2
29
77
11
67
50
3
3
43
1.34
91531681--91531732
22
2.5
21
82
14
63
42
1
5
50
1.37
91531763--91531900
7
20.6
7
66
25
52
60
1
4
34
1.26
91531792--91531845
28
2.0
28
81
3
65
61
0
7
31
1.24
91531865--91531914
17
2.9
17
83
13
59
64
2
2
32
1.16
91531887--91531964
42
1.9
40
82
10
95
56
3
1
38
1.26
91533909--91533980
30
2.4
30
83
0
81
33
23
19
23
1.97
91535815--91535859
23
1.9
25
82
13
60
60
0
2
37
1.09
91535902--91535966
17
3.8
17
82
8
71
38
0
1
60
1.07
91535929--91535957
10
3.0
10
95
5
51
31
0
0
68
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91536072--91536128
19
3.1
18
82
10
62
42
3
0
54
1.17
91536084--91536128
16
2.6
17
86
10
56
42
2
0
55
1.12
91536047--91536196
69
2.3
64
80
13
164
40
2
2
54
1.29
91536029--91536178
69
2.1
69
90
4
230
42
2
2
53
1.26
91536060--91536176
17
6.8
18
67
17
61
38
3
1
56
1.26
91536780--91536835
20
2.8
20
77
0
67
33
1
0
64
1.04
91536824--91536930
35
2.8
37
77
12
101
42
3
0
54
1.18
91536833--91536885
19
2.8
19
86
8
65
43
1
0
54
1.11
91536816--91536888
16
4.5
16
77
12
78
41
1
0
57
1.07
91536966--91537027
10
5.6
11
74
25
60
59
0
0
40
0.97
91536973--91537005
14
2.3
15
94
5
59
57
0
0
42
0.98
91536990--91537037
10
4.9
9
83
16
60
60
0
0
39
0.97
91536987--91537037
20
2.5
21
87
12
72
60
0
0
39
0.97
91536970--91537042
30
2.2
33
88
11
107
60
1
0
38
1.06
91537094--91537163
20
3.3
21
92
6
115
60
0
0
40
0.97
91537094--91537173
21
3.8
21
86
6
92
58
1
0
40
1.06
91537276--91537326
25
2.1
24
85
3
66
74
1
15
7
1.13
91539200--91539269
29
2.4
29
76
4
70
27
11
20
41
1.86
91543408--91543441
15
2.1
15
89
10
50
76
0
8
14
1.01
91545374--91545415
20
2.1
20
82
8
50
69
2
0
28
1.01
91548758--91549072
153
2.1
153
92
1
524
33
13
21
31
1.93
91551023--91551089
31
2.2
31
82
12
77
46
19
11
22
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91551125--91551165
21
2.0
21
90
0
64
24
19
29
26
1.98
91552295--91552351
30
1.9
30
85
7
80
7
33
0
59
1.24
91552359--91552393
17
2.1
17
94
0
61
2
20
0
77
0.90
91558404--91558549
53
2.7
53
89
4
204
29
28
15
26
1.96
91560196--91560238
20
2.2
20
100
0
86
55
9
9
25
1.61
91560868--91560937
31
2.3
30
80
2
86
44
12
10
32
1.76
91569601--91569643
19
2.2
20
81
18
56
62
2
9
25
1.37
91569603--91569643
20
2.1
19
86
13
57
63
2
9
24
1.37
91571223--91571310
27
3.1
28
76
14
83
60
1
2
36
1.17
91572249--91572279
11
2.7
11
95
5
53
54
6
0
38
1.26
91572661--91572696
17
2.2
16
90
5
54
80
8
2
8
0.99
91572638--91572694
27
2.1
28
83
9
73
77
7
3
12
1.10
91572747--91573004
3
87.0
3
67
22
111
62
0
7
29
1.28
91572771--91572979
54
3.8
54
73
17
137
63
0
6
29
1.22
91572936--91573002
26
2.5
28
79
16
79
61
2
8
26
1.41
91572766--91573005
127
1.9
127
82
8
299
62
0
6
30
1.27
91573843--91573873
16
1.9
16
93
0
53
80
0
16
3
0.83
91574249--91574290
17
2.5
17
88
3
68
11
4
45
38
1.62
91575709--91575744
18
1.9
19
88
5
56
41
2
2
52
1.30
91575828--91575866
9
4.3
9
83
0
51
30
5
12
51
1.62
91575828--91575866
18
2.2
18
95
0
69
30
5
12
51
1.62
91578611--91578701
45
2.0
45
97
2
175
45
4
13
37
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91579265--91579317
16
3.3
16
80
15
65
30
1
1
66
1.13
91579628--91579681
20
3.1
18
80
20
69
44
0
1
53
1.11
91581741--91581765
2
12.5
2
100
0
50
48
0
0
52
1.00
91583975--91584481
194
2.7
185
86
7
658
26
13
22
37
1.92
91586958--91587017
27
2.2
27
90
0
93
25
11
6
56
1.59
91586975--91587031
27
2.1
27
90
0
87
22
14
10
52
1.71
91592493--91592655
52
3.1
52
87
0
218
31
26
15
25
1.95
91603630--91603668
20
2.0
20
94
0
69
46
15
10
28
1.78
91622513--91622613
51
2.0
51
94
0
175
20
16
18
43
1.88
91631655--91631712
29
2.0
29
100
0
116
31
3
51
13
1.58
91634188--91634220
14
2.2
16
89
10
52
30
0
3
66
1.06
91635876--91635905
6
5.0
6
91
0
51
33
0
13
53
1.40
91637345--91637384
21
1.9
21
84
0
53
42
10
2
45
1.51
91647344--91647373
15
2.0
15
93
0
51
70
0
0
30
0.88
91650549--91650621
31
2.4
31
76
4
76
46
12
1
39
1.50
91651803--91651827
11
2.3
11
100
0
50
56
0
0
44
0.99
91653643--91653726
9
9.2
9
71
16
57
55
3
3
36
1.34
91653680--91653738
17
3.3
16
86
11
55
57
1
3
37
1.25
91653696--91653738
18
2.3
18
88
11
61
58
0
4
37
1.19
91653964--91653993
15
2.0
15
93
0
51
30
0
0
70
0.88
91669562--91669648
42
2.0
43
93
6
151
48
3
13
34
1.60
91669569--91669660
42
2.3
39
85
12
116
47
4
14
33
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91669579--91669673
42
2.2
42
87
5
129
49
4
13
32
1.61
91685341--91685460
48
2.5
48
100
0
240
38
19
0
42
1.51
91686969--91687039
29
2.5
28
76
17
65
2
30
2
63
1.23
91687058--91687103
2
26.0
2
76
24
50
56
0
0
43
0.99
91687058--91687103
5
8.8
5
92
7
74
56
0
0
43
0.99
91688303--91688481
96
1.9
96
90
0
286
37
18
34
9
1.84
91692303--91692428
24
5.3
23
80
9
101
21
13
29
35
1.92
91692315--91692426
48
2.3
48
86
6
147
20
14
28
36
1.92
91694892--91695049
51
3.1
51
92
0
253
32
17
22
27
1.96
91696984--91697054
29
2.5
28
76
17
65
2
30
2
63
1.23

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290