Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: A07
Parameters: 2 7 7 80 10 50 1000
Length:  93829987

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  202  of  295  ( 35342 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64577874--64577936
27
2.3
26
73
10
63
41
0
9
49
1.35
64577932--64577963
10
3.3
10
95
4
57
31
6
0
62
1.20
64581651--64581730
7
11.4
7
79
18
53
16
3
0
80
0.86
64582676--64582905
118
1.9
118
92
0
388
23
16
30
29
1.96
64583031--64583064
9
3.6
9
92
8
50
91
0
8
0
0.43
64583031--64583070
11
3.7
11
83
16
57
90
0
10
0
0.47
64583031--64583070
20
2.0
21
95
5
73
90
0
10
0
0.47
64583031--64583071
15
2.8
15
88
3
57
90
0
9
0
0.46
64591249--64591307
21
2.9
21
94
2
102
11
42
28
16
1.84
64591538--64592767
153
8.1
153
80
6
1187
36
17
11
34
1.86
64591538--64592805
307
4.2
304
81
5
1314
36
17
10
34
1.85
64591538--64592568
460
2.2
459
83
2
1309
36
17
11
34
1.86
64597465--64597728
132
2.0
129
89
6
406
30
12
8
48
1.71
64601082--64601131
23
2.2
23
88
0
73
58
16
2
24
1.49
64608626--64608675
16
3.2
16
94
2
84
6
30
52
12
1.62
64608822--64608856
12
3.0
12
87
4
54
31
0
0
68
0.90
64608857--64608894
18
2.1
18
85
9
51
65
15
0
18
1.27
64608993--64609037
20
2.2
21
84
7
58
68
8
0
22
1.16
64609066--64609105
11
3.6
11
82
0
53
60
10
10
20
1.57
64613193--64613235
19
2.2
19
83
8
50
41
2
11
44
1.53
64622580--64622646
21
3.2
20
70
16
55
19
22
17
40
1.92
64622593--64622658
21
3.2
20
67
16
53
15
25
18
40
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64626207--64626299
27
3.6
26
85
8
120
29
13
26
30
1.95
64626224--64626296
28
2.6
28
89
2
112
30
12
23
34
1.91
64627859--64627910
25
2.1
25
88
0
77
36
7
15
40
1.76
64628539--64628581
18
2.4
18
96
0
77
46
2
0
51
1.13
64628571--64628615
13
3.5
13
77
22
58
40
0
0
60
0.97
64628567--64628631
26
2.4
27
92
5
105
36
1
1
60
1.16
64633525--64633614
23
4.0
23
77
7
78
22
17
20
40
1.92
64637640--64637690
25
2.0
25
84
0
66
39
7
11
41
1.71
64638321--64638348
10
2.8
10
100
0
56
10
10
7
71
1.31
64641384--64641581
43
4.6
43
94
0
351
29
32
26
11
1.91
64641574--64641697
38
3.2
38
89
2
167
27
27
23
21
1.99
64647892--64647940
26
1.9
25
87
4
71
38
0
0
61
0.96
64647883--64647958
27
2.8
28
78
13
86
39
0
1
59
1.06
64648377--64648440
32
2.0
32
93
0
110
32
12
3
51
1.55
64652093--64652148
26
2.1
27
83
6
71
26
0
5
67
1.11
64658737--64658804
14
4.9
14
80
8
68
1
29
0
69
0.98
64658743--64658777
17
2.1
17
94
0
61
0
25
0
74
0.82
64658746--64658804
21
2.6
22
77
17
68
0
30
0
69
0.89
64659075--64659147
28
2.7
28
81
8
80
63
1
1
34
1.12
64660197--64660240
22
2.0
21
82
8
52
31
0
2
65
1.05
64660401--64660441
16
2.4
16
88
8
55
43
2
2
51
1.28
64662399--64662611
118
1.8
118
94
0
381
29
31
17
22
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64663126--64663159
17
2.0
17
100
0
68
47
17
11
23
1.81
64670056--64670117
27
2.3
26
76
13
63
48
11
3
37
1.55
64671635--64671662
5
5.6
5
100
0
56
82
0
0
17
0.68
64675822--64675849
5
5.6
5
100
0
56
82
0
0
17
0.68
64679165--64679211
11
3.9
12
81
13
53
63
0
2
34
1.06
64679268--64679301
11
3.0
11
91
8
59
70
0
0
29
0.87
64682963--64683001
7
5.6
7
93
0
69
25
12
46
15
1.81
64683401--64683499
11
9.2
11
66
22
50
68
2
3
26
1.15
64683401--64683499
10
10.3
10
71
17
68
68
2
3
26
1.15
64683454--64683512
25
2.3
26
85
8
77
66
1
1
30
1.12
64683402--64683508
19
5.7
18
70
16
74
67
1
3
27
1.18
64683591--64683633
19
2.3
19
83
0
50
65
2
0
32
1.06
64683399--64683633
9
24.7
9
64
18
68
60
2
3
33
1.28
64689036--64689364
165
2.0
165
95
1
597
34
17
24
23
1.96
64691948--64692063
10
11.8
10
67
17
73
63
1
3
31
1.21
64691953--64692063
29
3.8
28
78
5
96
64
1
3
29
1.20
64691971--64692064
38
2.5
37
77
10
100
65
2
4
27
1.22
64692244--64692288
19
2.4
19
88
7
65
28
6
0
64
1.19
64692334--64692379
21
2.2
21
84
7
58
34
2
0
63
1.07
64692333--64692381
20
2.4
20
80
12
55
36
2
0
61
1.08
64692288--64692399
29
3.8
29
75
9
84
34
4
1
58
1.28
64692513--64692717
98
2.0
103
84
7
271
37
12
20
30
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64697332--64698017
343
2.0
342
85
1
935
23
26
15
34
1.95
64701270--64701299
13
2.3
13
94
0
51
36
26
0
36
1.57
64701436--64701665
46
5.0
46
96
0
370
22
23
15
39
1.91
64703785--64703824
3
13.7
3
94
5
73
65
0
0
35
0.93
64705809--64705965
72
2.2
73
94
2
271
35
7
5
51
1.54
64706331--64706371
15
2.7
15
96
0
73
60
0
24
14
1.34
64706331--64706383
15
3.5
15
89
2
52
62
0
22
15
1.32
64709935--64709959
2
12.5
2
100
0
50
48
0
0
52
1.00
64710356--64710404
26
2.0
24
88
8
71
63
6
0
30
1.19
64714720--64714756
8
4.6
8
100
0
74
10
24
27
37
1.88
64715954--64716063
44
2.5
45
89
5
170
42
10
14
32
1.79
64722013--64722041
11
2.6
11
100
0
58
44
37
10
6
1.65
64722068--64722112
20
2.2
20
88
0
63
35
13
2
48
1.54
64723953--64723997
18
2.4
19
88
3
65
42
0
4
53
1.21
64724009--64724034
9
2.9
9
100
0
52
80
0
7
11
0.89
64724006--64724052
23
2.0
24
91
4
78
78
2
8
10
1.04
64725700--64725772
37
2.0
37
86
5
103
28
31
19
20
1.97
64725895--64726340
47
9.4
47
91
1
685
28
29
9
32
1.88
64732718--64732968
48
5.2
48
98
0
475
35
6
27
30
1.83
64732953--64732983
15
2.1
15
100
0
62
35
0
25
38
1.56
64732905--64733031
63
2.0
63
95
0
227
33
5
28
32
1.80
64732857--64733063
111
1.9
111
92
0
351
33
6
28
30
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64733204--64733306
37
2.8
37
92
0
170
23
18
32
26
1.97
64738015--64738048
18
1.9
18
94
5
61
79
2
5
11
1.02
64743988--64744111
41
2.9
42
81
4
151
34
27
15
22
1.94
64743964--64744122
43
3.8
41
80
5
158
32
27
15
23
1.95
64752082--64752252
43
4.0
42
82
8
213
31
26
18
23
1.97
64752082--64752235
84
1.8
84
90
2
247
30
26
18
24
1.98
64757634--64757669
16
2.2
16
90
0
54
52
19
13
13
1.74
64757904--64757982
29
2.8
28
85
9
108
22
13
35
27
1.93
64768619--64768676
26
2.2
26
93
0
98
17
13
27
41
1.87
64770392--64770446
21
2.5
22
85
2
67
16
34
32
16
1.91
64772367--64772393
13
2.1
13
100
0
54
44
14
0
40
1.46
64772406--64772480
36
2.1
36
100
0
150
38
24
5
32
1.78
64774027--64774055
10
2.7
11
94
5
51
17
0
0
82
0.66
64778252--64778331
39
2.1
39
92
0
133
47
13
6
32
1.68
64783805--64783834
12
2.5
12
94
0
51
26
0
0
73
0.84
64784591--64784657
28
2.4
28
94
0
116
26
28
25
19
1.99
64792089--64792188
28
3.4
28
75
17
94
30
25
20
25
1.99
64796014--64796177
6
27.3
6
100
0
328
50
16
0
33
1.46
64796685--64796727
22
2.0
22
86
8
63
34
23
11
30
1.90
64798147--64798195
20
2.5
20
82
0
53
30
14
14
40
1.85
64798158--64798196
20
2.0
20
89
0
60
30
12
12
43
1.81
64799567--64799618
27
2.0
26
84
3
68
36
19
25
19
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64810986--64811149
40
4.1
40
90
3
224
21
24
29
24
1.99
64815544--64815580
17
2.2
17
90
0
56
81
5
10
2
0.96
64819270--64819614
40
8.6
40
90
2
462
27
28
20
24
1.99
64828397--64828430
17
1.9
18
88
5
52
17
11
14
55
1.68
64832644--64832757
38
2.9
38
87
5
149
36
10
9
42
1.72
64832650--64832776
38
3.3
37
83
7
130
36
9
10
44
1.71
64835238--64835443
40
5.2
40
92
0
333
22
22
26
28
1.99
64849244--64849478
40
5.9
40
90
0
355
27
23
26
22
2.00
64853077--64853183
40
2.7
40
86
0
151
21
13
28
37
1.91
64853165--64853223
28
2.1
28
87
0
82
27
10
33
28
1.89

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295