Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  11  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3342256--3342302
16
2.9
16
81
6
58
82
0
6
10
0.82
3342255--3342304
10
4.8
10
80
4
55
82
0
6
12
0.85
3345456--3345483
10
2.8
10
100
0
56
32
7
0
60
1.24
3350708--3350744
12
3.0
13
88
11
60
13
40
8
37
1.74
3356982--3357042
31
2.0
31
96
0
113
34
9
27
27
1.89
3362119--3362151
11
2.9
12
86
13
52
33
0
0
66
0.92
3362153--3362192
18
2.2
18
86
8
55
67
12
0
20
1.22
3365145--3365187
22
2.0
22
85
0
59
60
6
9
23
1.51
3371258--3371310
23
2.2
24
80
12
65
47
7
11
33
1.68
3378544--3378600
21
2.7
20
73
10
51
63
1
5
29
1.27
3378605--3378662
19
3.0
20
75
9
59
65
0
8
25
1.21
3379659--3379694
3
12.0
3
100
0
72
66
0
0
33
0.92
3380007--3380050
18
2.4
18
92
0
70
43
0
0
56
0.99
3379999--3380059
10
6.3
10
74
12
56
40
0
0
59
0.98
3379998--3380083
10
8.7
10
68
16
54
40
0
1
58
1.06
3383819--3383871
22
2.5
22
84
3
72
67
15
9
7
1.39
3386982--3387341
179
2.0
179
95
0
639
41
17
14
26
1.88
3388394--3388437
18
2.4
18
85
7
54
34
13
22
29
1.93
3388414--3388443
15
2.0
15
93
0
51
26
16
23
33
1.96
3388407--3388441
18
1.9
18
100
0
70
28
14
22
34
1.93
3391184--3391355
86
2.0
86
82
6
206
34
9
27
28
1.89
3391877--3391939
31
2.0
32
87
3
92
34
9
15
39
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3395706--3396283
294
2.0
286
88
5
847
35
14
20
29
1.92
3398346--3398382
18
2.0
18
89
5
56
40
0
2
56
1.13
3399501--3399560
27
2.3
25
83
11
68
66
0
5
28
1.12
3399794--3399882
29
3.0
29
80
3
97
33
2
0
64
1.06
3405435--3405561
62
2.0
63
95
1
229
35
4
4
55
1.42
3405517--3405559
18
2.4
18
84
0
59
25
4
4
65
1.32
3406086--3406153
11
6.1
11
81
3
73
30
0
1
67
0.99
3408524--3408551
13
2.2
13
100
0
56
82
0
0
17
0.68
3412483--3412600
41
3.1
41
61
26
105
15
14
13
56
1.67
3412478--3412627
72
2.1
72
97
0
282
18
14
12
55
1.69
3416811--3416840
14
2.1
14
100
0
60
26
0
0
73
0.84
3418161--3418196
16
2.2
16
90
9
56
16
0
0
83
0.65
3419860--3419897
15
2.4
16
83
16
53
50
2
0
47
1.15
3426869--3426913
22
2.0
23
95
4
83
22
4
26
46
1.70
3431958--3432017
28
2.1
28
100
0
120
31
13
6
48
1.68
3431965--3432026
28
2.3
26
89
10
90
25
12
6
54
1.62
3432653--3432701
23
2.1
23
81
7
55
32
14
18
34
1.91
3444379--3444436
13
4.5
13
86
0
71
41
20
10
27
1.85
3444379--3444436
26
2.2
26
90
0
89
41
20
10
27
1.85
3453482--3453528
21
2.2
22
92
3
78
21
38
19
21
1.94
3458951--3458985
5
7.0
5
90
9
54
82
17
0
0
0.66
3467597--3467643
21
2.4
19
85
7
58
59
4
2
34
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3468130--3468184
24
2.2
25
78
12
60
58
0
1
40
1.09
3470210--3470243
17
2.1
16
88
5
50
52
11
2
32
1.53
3473694--3473728
18
1.9
18
88
11
54
37
5
0
57
1.23
3477383--3477627
125
2.0
125
94
0
427
28
20
16
34
1.94
3489229--3489275
21
2.3
20
82
10
60
40
23
6
29
1.79
3491383--3491438
25
2.3
26
85
14
75
33
5
0
60
1.19
3491816--3491859
2
22.0
2
95
0
79
0
47
2
50
1.13
3495694--3495733
16
2.4
16
87
4
53
20
5
2
72
1.15
3495889--3495966
38
2.1
38
97
0
147
29
0
11
58
1.33
3498677--3499092
208
2.0
208
95
0
751
36
11
16
35
1.85
3503646--3503814
89
1.9
89
88
2
259
38
15
14
31
1.88
3507831--3507912
22
3.6
22
70
15
60
48
0
1
50
1.08
3519451--3519516
31
2.1
31
97
0
123
42
10
18
28
1.83
3527947--3528002
26
2.2
26
96
0
103
32
7
25
35
1.83
3535971--3536001
3
10.3
3
92
0
53
29
0
3
67
1.06
3539457--3539495
20
2.0
19
85
5
51
28
10
12
48
1.74
3540421--3541521
556
2.0
546
80
4
1255
29
14
21
34
1.93
3543955--3544019
30
2.1
31
83
8
80
36
1
12
49
1.50
3544288--3544361
7
10.7
7
74
8
53
40
27
2
29
1.70
3548223--3548298
32
2.4
32
95
0
134
32
31
11
23
1.91
3549630--3549764
69
2.0
69
98
0
261
28
32
12
26
1.93
3554897--3554932
17
2.2
17
90
5
56
61
11
0
27
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3556024--3556057
16
2.1
16
88
0
50
14
5
35
44
1.70
3559341--3559398
22
2.7
21
83
5
62
56
1
3
37
1.26
3565430--3565463
16
2.1
17
88
5
52
44
23
8
23
1.81
3573959--3574005
21
2.2
21
96
0
85
29
17
10
42
1.82
3581110--3581285
46
3.8
46
76
12
180
19
20
28
30
1.97
3581106--3581278
93
1.9
93
91
0
283
20
20
29
29
1.98
3583888--3584065
97
1.8
97
82
8
227
50
7
14
27
1.70
3604019--3604057
16
2.5
15
87
8
51
79
0
0
20
0.73
3604031--3604081
3
18.0
3
80
8
54
68
0
1
29
1.00
3609079--3609110
15
2.1
15
100
0
64
43
6
0
50
1.27
3610662--3610688
14
1.9
14
100
0
54
44
0
7
48
1.31
3611798--3611830
3
11.0
3
100
0
66
33
0
33
33
1.58
3612319--3612360
20
2.1
20
100
0
84
30
19
14
35
1.91
3612722--3612765
14
3.3
13
81
12
54
50
27
0
22
1.50
3612720--3612781
27
2.3
26
78
13
72
45
30
1
22
1.62
3614193--3614260
34
2.0
34
100
0
136
44
8
2
44
1.50
3614197--3614269
34
2.2
33
92
4
121
49
6
2
41
1.44
3627693--3627727
3
11.7
3
100
0
70
0
31
0
68
0.90
3629772--3629816
9
5.0
9
84
10
56
22
0
2
75
0.91
3629772--3629817
13
3.5
13
91
5
74
23
0
2
73
0.94
3632805--3632856
15
3.7
14
74
25
56
53
1
1
42
1.23
3633356--3633415
27
2.2
28
82
14
81
58
0
6
35
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3634612--3634652
21
1.9
22
85
5
57
63
2
0
34
1.08
3635333--3635402
30
2.4
31
85
7
92
37
4
7
51
1.49
3636251--3636313
33
1.9
33
90
6
101
63
0
4
31
1.15
3641317--3641411
40
2.4
40
75
7
95
46
14
11
27
1.79
3644123--3644160
3
12.3
3
94
5
67
65
0
34
0
0.93
3644328--3644526
100
2.2
90
82
15
239
35
1
15
48
1.51
3644365--3644692
114
3.1
100
78
17
291
33
0
14
50
1.49
3644431--3644876
114
3.9
115
92
2
704
32
0
14
52
1.47
3644432--3644876
229
1.9
229
90
4
718
32
0
14
52
1.47
3644931--3644961
15
2.0
16
93
6
55
38
0
6
54
1.26
3649874--3649931
27
2.1
27
83
0
71
27
25
22
24
2.00
3650734--3650760
5
5.4
5
100
0
54
59
0
0
40
0.98
3651009--3651071
30
2.1
30
82
8
76
61
4
4
28
1.36
3662415--3662444
7
4.3
7
100
0
60
73
0
0
26
0.84
3671670--3671728
26
2.4
24
88
11
84
32
3
0
64
1.10
3672446--3672476
12
2.6
12
94
0
53
80
0
0
19
0.71
3680116--3680153
17
2.1
19
90
9
62
42
0
0
57
0.98
3689587--3689641
15
3.7
15
100
0
110
43
49
0
7
1.30
3689587--3689641
7
7.4
7
76
11
56
43
49
0
7
1.30
3689593--3689635
8
5.6
8
78
10
54
46
48
0
4
1.22
3689587--3689664
30
2.6
30
87
4
86
43
46
1
8
1.43
3701908--3701933
1
26.0
1
100
0
52
100
0
0
0
0.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3703111--3703225
46
2.5
46
83
5
137
33
21
19
26
1.97
3703154--3703548
129
3.1
126
86
4
485
29
21
21
27
1.98
3703324--3703551
44
5.3
41
72
9
152
29
19
21
28
1.98
3703731--3703800
15
4.7
15
100
0
140
44
48
0
7
1.30
3703737--3703794
8
7.6
8
77
11
68
46
48
0
5
1.24
3703731--3703823
30
3.1
30
90
3
116
44
46
1
8
1.41
3703731--3703823
45
2.1
45
87
4
134
44
46
1
8
1.41
3717869--3717957
18
4.9
18
91
0
151
34
16
20
28
1.94
3717869--3717960
36
2.6
36
98
0
175
34
16
20
28
1.94
3722454--3722509
21
2.7
20
86
2
58
32
7
3
57
1.43

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295