Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  283  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96320503--96320561
31
1.9
31
89
0
91
32
10
11
45
1.74
96324121--96324146
2
13.0
2
100
0
52
50
0
0
50
1.00
96326281--96326347
31
2.2
30
84
10
84
37
5
0
56
1.24
96331843--96331887
17
2.4
19
82
10
58
26
4
2
66
1.22
96332618--96332654
20
1.9
18
89
10
56
59
0
0
40
0.97
96333246--96333300
28
2.0
27
96
3
101
63
3
3
29
1.28
96334512--96334544
13
2.3
15
90
10
52
57
0
0
42
0.98
96343218--96343257
17
2.4
17
95
0
71
12
20
32
35
1.90
96349957--96350017
22
2.8
22
80
2
70
65
8
6
19
1.41
96351349--96351424
33
2.3
33
88
0
116
18
27
28
25
1.98
96352993--96353050
27
2.1
27
81
12
75
62
3
3
31
1.29
96352995--96353070
29
2.8
26
84
11
82
60
2
5
31
1.33
96353472--96353507
3
12.0
3
88
11
56
69
0
0
30
0.89
96353742--96353775
18
1.9
18
88
5
52
61
5
11
20
1.50
96357723--96358709
492
2.0
492
98
0
1893
30
21
15
32
1.94
96363102--96363163
28
2.2
28
88
0
88
43
6
8
41
1.60
96363110--96363165
28
2.0
28
96
0
103
39
5
10
44
1.62
96363665--96363698
15
2.3
15
100
0
68
26
5
17
50
1.69
96365915--96365939
5
5.0
5
100
0
50
40
0
0
60
0.97
96373810--96373893
42
2.0
42
100
0
168
47
4
19
28
1.69
96382717--96382767
12
4.1
13
73
16
54
43
0
0
56
0.99
96385129--96385169
17
2.4
18
76
15
52
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96390284--96390337
26
2.1
26
82
6
65
22
9
1
66
1.30
96391193--96391248
26
2.1
27
78
15
64
41
23
3
32
1.71
96391334--96391653
46
7.0
46
92
0
471
21
24
14
39
1.91
96394509--96394573
30
2.2
30
91
5
105
56
15
3
24
1.53
96394759--96394793
18
1.9
18
88
0
52
14
31
8
45
1.75
96396051--96396093
15
2.6
17
82
10
54
72
0
0
27
0.85
96396027--96396088
31
2.1
29
84
6
79
66
0
0
33
0.92
96399447--96399485
15
2.6
16
80
16
55
53
0
0
46
1.00
96404044--96404078
18
2.1
18
89
10
56
62
0
5
31
1.18
96405763--96405804
19
2.2
19
86
0
57
42
2
7
47
1.43
96407829--96407882
27
2.0
27
96
0
99
29
24
11
35
1.90
96413333--96413407
17
4.0
19
71
25
54
68
2
21
8
1.28
96426015--96426124
41
2.8
38
75
6
105
30
28
20
20
1.98
96426015--96426124
38
2.8
38
76
6
105
30
28
20
20
1.98
96427223--96427262
3
13.0
3
84
5
53
60
2
0
37
1.11
96427792--96427852
5
12.4
5
75
16
56
55
1
1
40
1.19
96434391--96434415
13
1.9
13
100
0
50
64
4
0
32
1.12
96436286--96436354
23
2.9
24
78
8
61
52
0
0
47
1.00
96439566--96439599
15
2.2
16
89
5
52
32
2
5
58
1.37
96452779--96452973
63
3.1
63
91
0
309
12
15
28
42
1.84
96452926--96453024
51
1.9
51
87
4
146
13
20
20
46
1.83
96452976--96453161
66
2.7
70
84
6
229
9
19
23
47
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96453126--96453216
27
3.4
26
66
11
67
12
26
19
41
1.86
96453110--96453483
54
6.9
54
87
1
457
13
25
20
40
1.89
96453315--96453406
27
3.4
27
69
16
82
14
25
19
41
1.89
96457497--96457552
20
2.8
20
78
13
62
30
5
1
62
1.28
96459790--96459819
15
1.9
15
93
6
51
76
13
6
3
1.11
96460872--96461041
26
7.0
23
68
21
80
32
6
3
57
1.42
96460909--96461055
26
5.8
25
70
13
81
31
7
4
56
1.46
96460976--96461046
22
3.0
22
73
10
61
28
5
4
61
1.37
96461024--96461088
26
2.5
26
75
7
60
30
9
1
58
1.39
96461144--96461225
26
3.2
26
82
5
103
32
6
0
60
1.21
96461396--96461483
21
4.5
21
68
25
75
26
3
1
69
1.11
96461327--96461758
144
2.8
148
89
10
676
28
6
1
64
1.26
96461345--96461593
49
5.2
49
74
9
208
29
5
1
63
1.26
96461374--96461615
48
5.0
47
67
16
129
27
5
1
65
1.24
96461587--96461635
16
3.1
15
85
11
62
18
8
0
73
1.07
96461441--96461758
163
2.0
161
96
3
586
27
6
0
64
1.23
96461541--96461646
21
5.4
20
70
22
59
26
4
0
67
1.16
96461608--96461646
16
2.5
16
87
4
53
23
5
0
71
1.05
96461642--96461736
48
2.0
47
82
10
113
29
7
0
63
1.22
96463541--96463678
53
2.6
53
84
4
161
26
13
28
31
1.93
96465994--96466038
24
2.0
22
82
8
54
31
4
13
51
1.61
96469124--96469160
16
2.3
16
100
0
74
32
32
5
29
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96472290--96472333
20
2.3
19
80
4
52
34
9
2
54
1.44
96473328--96473433
43
2.5
43
88
0
149
22
14
30
33
1.93
96473498--96473580
31
2.6
31
84
3
94
61
19
2
16
1.45
96473817--96473867
21
2.4
21
83
0
66
1
43
21
33
1.64
96473838--96473890
27
2.0
27
92
0
88
0
43
22
33
1.54
96474308--96474336
14
2.1
14
93
6
51
58
6
0
34
1.25
96479445--96479889
9
51.0
9
67
10
106
35
1
15
46
1.56
96479470--96479905
130
3.3
130
94
0
748
36
1
15
46
1.55
96481722--96481783
19
3.3
19
69
15
56
64
4
6
24
1.37
96481730--96481794
18
3.5
17
76
14
58
61
4
6
27
1.40
96483443--96483498
27
2.0
28
82
3
69
26
17
39
16
1.91
96483555--96483587
13
2.5
13
95
0
57
45
0
30
24
1.53
96484098--96484132
17
2.0
18
88
5
54
65
0
0
34
0.93
96484243--96484317
26
2.9
27
92
4
118
46
4
6
42
1.48
96484562--96484608
15
3.1
16
88
8
64
48
34
4
12
1.61
96484733--96484788
23
2.5
23
80
11
55
32
39
3
25
1.73
96484776--96484818
21
2.0
21
82
8
52
34
37
0
27
1.57
96485158--96485212
28
1.9
29
82
10
69
58
7
0
34
1.26
96485621--96485654
16
2.1
17
89
10
54
55
0
0
44
0.99
96497599--96497639
20
2.0
20
90
0
64
60
0
0
39
0.96
96499937--96499996
27
2.3
26
82
2
66
35
18
23
23
1.96
96499997--96500172
67
2.6
67
93
0
307
31
22
27
17
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96500740--96500793
27
2.0
27
85
3
74
37
18
20
24
1.94
96500794--96500962
27
6.3
27
90
0
257
24
21
20
34
1.97
96507393--96507477
43
2.0
43
100
0
170
47
21
18
12
1.82
96507707--96507758
27
2.0
26
84
3
68
34
21
26
17
1.95
96508016--96508047
8
4.0
8
91
0
55
3
37
34
25
1.72
96508421--96508535
27
4.3
27
85
0
149
25
20
19
34
1.96
96508788--96508827
21
1.9
21
94
0
71
17
30
5
47
1.69
96514610--96514641
16
2.0
17
88
11
50
18
6
6
68
1.32
96518414--96518471
31
2.0
30
90
10
93
24
3
10
62
1.43
96519240--96519297
29
2.0
29
100
0
116
34
6
20
37
1.80
96525955--96526155
109
1.8
109
86
0
294
32
17
18
30
1.94
96526363--96526392
15
2.0
15
93
0
51
63
0
6
30
1.20
96526474--96526504
15
2.1
15
100
0
62
61
0
6
32
1.21
96526823--96526882
18
3.4
17
78
13
66
63
3
6
26
1.35
96526855--96526930
3
24.3
3
81
7
89
60
2
6
30
1.36
96527841--96527893
19
2.7
19
80
8
52
83
3
3
9
0.90
96527842--96527892
26
2.0
26
84
7
68
82
3
3
9
0.93
96528168--96528220
22
2.4
22
93
0
88
13
3
52
30
1.57
96528722--96528823
46
2.2
46
82
0
123
28
24
20
26
1.99
96528554--96528991
229
1.9
229
91
0
723
27
23
19
28
1.98
96528950--96529429
44
10.9
44
73
6
317
30
24
15
29
1.95
96528943--96529431
221
2.2
221
96
0
899
30
24
15
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96529336--96529855
46
11.6
46
66
12
188
28
25
20
26
1.99
96529395--96529953
134
4.2
134
98
0
1055
28
23
21
25
1.99
96535627--96535827
109
1.8
109
85
0
285
31
17
19
31
1.95
96536035--96536064
15
2.0
15
93
0
51
63
0
6
30
1.20
96536146--96536176
15
2.1
15
100
0
62
61
0
6
32
1.21
96536493--96536567
18
4.4
17
83
6
71
64
2
5
28
1.29
96536525--96536609
3
27.3
3
83
7
107
61
2
5
30
1.32
96537517--96537572
19
2.8
19
76
7
58
82
3
5
8
0.94
96537518--96537568
26
2.0
26
84
7
68
82
3
3
9
0.93
96537843--96537895
22
2.4
22
93
0
88
13
3
52
30
1.57

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295