Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  131  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44936597--44936899
129
2.4
129
79
1
304
23
20
26
30
1.98
44938779--44938848
31
2.3
31
80
5
79
42
11
8
37
1.72
44940023--44940064
16
2.5
17
84
7
59
64
4
0
30
1.14
44942868--44942899
15
2.1
15
94
0
55
65
0
3
31
1.08
44943356--44943488
49
2.8
48
74
11
137
51
3
12
32
1.56
44943808--44943849
21
2.0
22
90
4
68
61
2
4
30
1.29
44945172--44945626
132
3.4
132
90
0
687
26
24
21
27
1.99
44945252--44945470
45
4.9
44
67
7
120
26
27
20
26
1.99
44945605--44945850
44
5.7
43
76
7
194
18
22
21
37
1.94
44945647--44945893
44
5.7
44
78
5
227
19
22
21
36
1.95
44945579--44946319
87
8.5
87
80
7
661
21
21
20
35
1.96
44945587--44946319
173
4.2
174
79
6
668
21
21
20
36
1.96
44946092--44946232
44
3.3
42
74
6
149
23
21
20
34
1.97
44946388--44946515
64
2.0
64
90
0
202
35
13
17
34
1.88
44950997--44951042
9
4.8
10
77
17
53
50
13
17
19
1.78
44950997--44951042
19
2.4
19
85
7
58
50
13
17
19
1.78
44953384--44953435
26
2.0
26
88
0
77
59
3
7
28
1.43
44953659--44953792
49
2.8
49
74
10
132
52
3
11
32
1.56
44954111--44954152
21
2.0
22
90
4
68
61
2
4
30
1.29
44955451--44955491
22
1.9
21
85
5
55
48
4
0
46
1.23
44956292--44956332
16
2.6
15
84
7
55
29
0
19
51
1.47
44956301--44956332
15
2.1
15
94
0
55
31
0
15
53
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44956327--44956503
96
1.8
99
85
8
256
43
1
14
41
1.52
44956613--44957151
126
4.3
126
90
3
834
33
17
21
27
1.96
44960154--44960768
116
5.3
116
96
0
1088
46
9
3
40
1.53
44961794--44961820
7
3.9
7
100
0
54
59
14
0
25
1.36
44961786--44961819
14
2.4
14
90
0
50
64
8
0
26
1.22
44962981--44963030
20
2.4
22
83
10
68
38
0
32
30
1.58
44962981--44963038
11
5.5
10
80
15
64
39
0
29
31
1.57
44962981--44963044
31
2.1
31
88
5
94
40
0
28
31
1.57
44971286--44971339
12
4.6
12
81
4
56
77
5
7
9
1.11
44971297--44971322
11
2.4
11
100
0
52
84
0
7
7
0.77
44978222--44978299
39
2.0
39
100
0
156
30
25
10
33
1.89
44982920--44983407
243
2.0
243
99
0
967
32
15
18
34
1.92
44984296--44984353
30
1.9
30
86
6
82
22
6
41
29
1.80
44988121--44988149
15
1.9
15
100
0
58
75
0
0
24
0.80
44990774--44990818
23
2.0
23
86
8
65
44
2
2
51
1.26
44992091--44992143
24
2.2
24
86
0
70
22
9
15
52
1.70
44995719--44995760
18
2.3
18
80
8
50
14
21
38
26
1.91
44996107--44996203
20
4.8
20
71
0
86
15
23
24
36
1.94
44996213--44996296
26
3.2
26
78
9
100
20
19
21
39
1.93
45004659--45004694
17
2.1
18
89
5
56
22
8
5
63
1.43
45011645--45011745
50
2.0
50
96
0
184
34
29
9
25
1.88
45018452--45018493
16
2.5
17
84
7
59
40
4
0
54
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45019312--45019336
10
2.5
10
100
0
50
40
0
0
60
0.97
45037157--45037211
25
2.2
25
83
6
67
41
5
1
50
1.36
45044729--45044805
11
6.8
11
70
15
50
63
2
2
31
1.21
45048914--45048962
25
1.9
26
83
4
64
57
16
6
20
1.60
45055170--45055211
17
2.4
17
81
14
50
11
4
4
78
1.06
45064979--45065076
49
2.0
49
97
0
187
37
6
21
34
1.78
45067355--45067418
31
2.1
31
93
0
110
42
17
17
23
1.89
45079029--45079209
89
2.0
89
96
0
335
25
12
24
37
1.91
45079991--45080022
13
2.3
15
89
10
50
37
6
34
21
1.79
45082925--45082954
12
2.4
13
94
5
53
23
23
10
43
1.83
45085997--45086140
42
3.3
43
79
8
159
32
22
17
27
1.96
45085992--45086183
86
2.2
86
82
7
230
32
22
17
28
1.96
45090787--45090932
57
2.6
56
77
12
161
34
17
18
29
1.94
45092580--45092632
21
2.5
22
76
11
56
32
18
7
41
1.79
45093687--45093731
20
2.2
20
84
7
56
35
13
4
46
1.63
45108171--45108311
57
2.4
58
84
3
169
31
17
20
30
1.96
45116135--45116332
27
7.3
27
81
2
218
28
23
8
39
1.83
45116149--45116332
54
3.4
54
88
1
244
29
22
7
40
1.81
45116135--45116332
81
2.4
81
85
1
254
28
23
8
39
1.83
45116364--45116515
54
2.8
55
83
4
193
42
20
7
30
1.79
45116364--45116490
27
4.7
27
85
3
175
40
21
7
29
1.81
45116336--45116542
27
7.6
27
79
8
154
42
19
8
29
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45117505--45117574
25
2.8
24
91
4
104
24
27
24
24
2.00
45117504--45117587
25
3.4
24
83
8
98
27
23
23
25
2.00
45117722--45117813
42
2.2
42
94
0
157
31
15
20
32
1.94
45117837--45117951
31
3.7
31
96
1
205
28
17
26
27
1.97
45129523--45129672
76
2.0
76
93
2
257
22
16
32
29
1.95
45134195--45134246
26
2.0
27
85
11
72
25
5
17
51
1.67
45138998--45139050
20
2.7
20
85
5
72
49
9
5
35
1.59
45141710--45141817
26
4.2
26
95
0
198
32
7
25
35
1.84
45143439--45143525
27
3.2
27
79
9
106
19
24
21
34
1.96
45149475--45149525
22
2.3
22
82
0
57
29
5
19
45
1.74
45150128--45150160
16
2.1
17
88
11
52
54
6
0
39
1.25
45158703--45158892
93
2.0
94
97
2
364
35
21
12
31
1.90
45160632--45160663
5
6.6
5
96
3
57
0
15
0
84
0.63
45161120--45161158
21
1.9
20
84
5
51
66
2
0
30
1.05
45163014--45163061
18
2.8
18
78
15
57
35
0
0
64
0.94
45164656--45164716
26
2.4
25
72
17
63
54
0
1
44
1.10
45164655--45164722
25
2.7
25
72
14
68
52
0
1
45
1.09
45170067--45170206
39
3.5
39
93
2
201
30
28
22
18
1.97
45171446--45171523
39
2.0
39
97
0
147
38
29
8
23
1.85
45174233--45174257
6
4.2
6
100
0
50
20
0
0
80
0.72
45174405--45174446
13
2.9
14
80
13
50
54
0
0
45
0.99
45174409--45174445
16
2.3
16
86
13
58
59
0
0
40
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45174477--45174528
15
3.2
15
73
19
50
51
1
1
44
1.23
45181669--45181810
71
2.0
72
87
1
205
56
14
9
19
1.65
45183125--45183303
92
1.9
93
85
7
249
27
19
17
35
1.95
45185458--45185501
19
2.3
20
80
11
56
59
0
18
22
1.38
45185667--45185703
9
4.1
9
89
0
56
32
10
10
45
1.74
45188892--45188939
3
16.0
3
88
0
69
62
0
33
4
1.14
45204049--45206268
47
47.1
47
97
1
4101
31
8
29
29
1.87
45206387--45206464
36
2.1
37
88
2
113
24
17
30
26
1.97
45220345--45220415
30
2.4
30
83
4
81
26
14
21
38
1.91
45222761--45222811
23
2.3
22
79
3
57
60
1
0
37
1.08
45224369--45224401
17
2.0
17
94
5
59
51
0
6
42
1.26
45226610--45226894
69
4.1
69
76
0
257
16
34
11
37
1.84
45231066--45231106
21
1.9
22
85
14
59
34
2
26
36
1.70
45231511--45231564
23
2.3
24
81
9
58
35
0
9
55
1.32
45234605--45234637
17
2.0
17
94
5
59
36
15
0
48
1.45
45234918--45235188
46
5.9
46
83
6
316
21
22
14
40
1.90
45234923--45235191
92
2.9
92
89
0
385
21
23
14
41
1.89
45234923--45235188
138
1.9
138
85
3
365
21
22
14
41
1.89
45238535--45238600
28
2.3
28
82
7
71
60
6
4
28
1.40
45241920--45241969
20
2.5
20
93
0
82
48
14
20
18
1.82
45242211--45242257
24
2.0
24
83
8
60
6
2
27
63
1.30
45245002--45245124
48
2.6
48
75
7
124
18
23
27
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45245017--45245192
48
3.7
48
74
10
144
17
22
28
30
1.97
45245260--45245285
11
2.4
11
100
0
52
15
7
30
46
1.74
45246189--45246233
16
3.1
15
84
12
58
55
0
0
44
0.99
45246210--45246234
13
1.9
13
100
0
50
48
0
0
52
1.00
45246242--45246283
20
2.0
22
86
9
61
54
0
0
45
0.99
45246501--45246530
14
2.1
15
93
6
53
33
0
3
63
1.11
45246666--45246701
8
4.6
8
86
6
56
86
0
2
11
0.68
45246666--45246702
7
5.0
7
90
9
56
83
0
2
13
0.74
45261252--45261312
23
2.8
22
77
20
65
29
19
0
50
1.48
45261765--45261800
18
2.1
18
89
5
56
33
25
0
41
1.55

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295