Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  142  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48299939--48300112
45
3.8
46
76
10
185
21
20
28
29
1.98
48299936--48300105
92
1.8
92
91
2
279
22
21
28
28
1.99
48301773--48301814
20
2.2
19
91
4
66
28
2
0
69
1.01
48400545--48400806
42
6.6
39
82
13
304
29
21
27
21
1.99
48400545--48400806
81
3.3
77
83
11
302
29
21
27
21
1.99
48400545--48400806
121
2.2
117
84
8
332
29
21
27
21
1.99
48401849--48402463
310
2.0
307
83
6
780
31
16
24
28
1.96
48407295--48407479
40
4.7
40
79
7
182
24
23
27
24
2.00
48407348--48407512
79
2.1
79
80
6
183
26
21
27
24
1.99
48412629--48412653
7
3.6
7
100
0
50
28
0
44
28
1.55
48415817--48416081
40
6.7
40
86
2
329
24
22
26
26
2.00
48420685--48420742
24
2.4
24
94
0
98
27
24
25
22
2.00
48421532--48421573
20
2.1
21
86
8
61
28
4
11
54
1.57
48422904--48423021
40
3.0
40
97
0
218
22
19
29
28
1.98
48431196--48431311
38
3.0
40
92
5
200
22
18
29
29
1.98
48435051--48435105
20
2.8
19
83
8
74
41
23
27
7
1.80
48435009--48435096
20
4.4
20
74
7
72
43
19
26
11
1.84
48443832--48444026
47
4.1
47
95
0
336
30
11
31
26
1.92
48443997--48444133
46
3.0
46
84
0
184
34
8
30
27
1.85
48445979--48446107
46
2.8
46
95
2
224
19
20
29
31
1.97
48448639--48448682
23
1.9
23
81
9
54
38
27
0
34
1.57
48449288--48449383
40
2.3
43
82
10
119
38
27
9
25
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48450527--48450566
21
2.0
20
90
5
62
20
27
40
12
1.88
48455674--48455889
119
1.8
120
87
5
330
25
26
21
25
2.00
48455672--48455896
79
2.8
79
81
6
222
25
27
22
24
2.00
48455653--48455896
40
6.1
40
81
8
266
25
27
22
25
2.00
48461899--48461931
16
2.1
16
94
0
57
51
21
15
12
1.75
48462153--48462223
28
2.5
28
86
0
97
23
15
32
28
1.95
48469730--48469804
28
2.7
28
87
8
116
24
13
34
28
1.93
48470840--48470873
18
1.9
18
88
5
52
41
11
17
29
1.85
48476312--48476412
40
2.6
40
82
3
125
39
5
5
48
1.52
48477261--48477295
15
2.3
15
100
0
70
28
11
28
31
1.92
48482901--48482958
30
1.9
30
100
0
116
51
3
15
29
1.60
48486458--48486631
49
3.5
49
87
1
267
25
16
27
30
1.97
48486450--48486631
99
1.8
99
96
0
337
25
17
28
29
1.97
48491418--48491489
21
3.3
21
68
21
67
41
13
6
37
1.72
48491406--48491495
44
2.0
44
100
0
180
41
13
6
38
1.71
48491437--48491505
21
3.2
21
68
13
50
42
11
7
39
1.69
48492432--48492490
29
2.1
28
87
6
84
67
5
1
25
1.20
48492579--48492639
32
1.9
32
86
0
86
42
3
8
45
1.50
48492627--48492656
15
2.0
15
100
0
60
53
6
6
33
1.53
48495532--48495584
21
2.5
21
82
14
65
47
1
1
49
1.23
48495831--48495893
26
2.4
27
79
12
78
36
22
6
34
1.80
48502160--48502209
15
3.4
15
71
15
50
58
4
4
34
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48502355--48502384
14
2.1
14
93
0
51
60
3
6
30
1.39
48503044--48503097
28
2.0
27
82
10
65
68
5
1
24
1.21
48503068--48503108
22
1.9
21
85
5
55
68
2
2
26
1.15
48503068--48503108
21
2.0
21
85
9
57
68
2
2
26
1.15
48503089--48503119
13
2.4
13
94
0
53
64
0
0
35
0.94
48514232--48514293
28
2.2
28
94
0
106
32
29
8
30
1.86
48514399--48514488
28
3.2
28
78
7
94
17
23
24
34
1.96
48514409--48514499
27
3.2
28
78
4
76
19
25
20
34
1.97
48522324--48522379
23
2.5
22
80
5
58
35
17
19
26
1.94
48522371--48522438
24
2.7
26
82
8
79
33
22
22
22
1.97
48528220--48528258
15
2.6
15
87
0
60
23
15
25
35
1.94
48538655--48538687
8
4.1
8
100
0
66
48
39
0
12
1.40
48544843--48544880
9
4.3
9
84
15
53
60
0
21
18
1.36
48544846--48544882
18
2.1
18
100
0
74
56
0
21
21
1.42
48547913--48548024
43
2.6
43
85
1
154
32
20
17
29
1.96
48551665--48551756
42
2.2
42
88
0
130
19
21
42
16
1.89
48553520--48553705
40
4.7
40
81
7
191
25
28
22
23
1.99
48553520--48553705
79
2.3
81
80
6
209
25
28
22
23
1.99
48563163--48563320
68
2.3
68
77
13
153
20
27
15
35
1.94
48566056--48566089
16
2.2
15
94
5
59
47
17
23
11
1.81
48566054--48566091
16
2.4
15
87
12
58
47
18
23
10
1.79
48566311--48566393
28
2.9
28
89
5
114
27
15
31
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48570758--48570872
28
4.1
29
83
5
130
28
14
28
27
1.95
48570758--48570868
56
2.0
57
84
8
147
27
15
29
27
1.96
48571792--48571931
70
2.0
70
98
0
271
30
8
16
44
1.78
48576378--48576485
29
3.8
28
82
6
117
27
30
15
25
1.96
48576379--48576497
29
4.1
29
83
5
116
28
29
14
27
1.95
48576715--48576755
16
2.6
16
92
0
64
19
24
9
46
1.80
48579873--48580058
74
2.5
74
85
0
228
26
17
20
35
1.95
48580287--48580328
22
2.0
21
86
13
59
40
4
11
42
1.63
48580287--48580328
21
2.0
22
86
13
61
40
4
11
42
1.63
48581377--48581446
34
2.1
34
100
0
140
44
27
11
17
1.82
48584358--48584431
29
2.6
29
82
0
85
24
33
16
25
1.95
48584331--48584439
58
1.9
57
84
5
148
26
32
13
27
1.94
48584676--48584730
8
6.9
8
83
8
51
12
23
14
49
1.78
48584676--48584735
16
3.8
16
80
8
59
13
23
15
48
1.79
48584669--48584735
24
2.8
24
72
17
66
13
20
16
49
1.79
48598879--48598908
14
2.1
14
93
0
51
43
0
10
46
1.37
48603583--48603742
43
3.7
42
78
8
135
34
25
16
23
1.95
48606193--48606271
28
2.8
28
86
0
104
34
11
25
29
1.91
48608231--48608327
28
3.5
28
88
0
122
20
21
27
29
1.98
48613301--48613362
28
2.2
28
82
5
81
38
11
22
27
1.88
48622606--48622782
94
1.9
91
86
5
248
21
28
19
30
1.97
48623111--48623194
30
2.8
30
90
0
141
29
26
11
32
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48625092--48625121
14
2.1
14
93
0
51
20
46
0
33
1.51
48630044--48630100
25
2.4
24
80
11
64
70
1
22
5
1.17
48632044--48632307
47
5.6
47
92
0
402
33
9
28
28
1.88
48633729--48634040
40
7.8
40
90
1
446
23
20
29
26
1.99
48638239--48638300
26
2.3
26
83
2
70
37
27
9
25
1.87
48638408--48638486
28
2.9
28
85
9
110
22
24
20
32
1.97
48638408--48638519
27
4.2
26
80
8
109
22
22
19
35
1.96
48641331--48641405
34
2.2
34
88
2
116
30
17
20
32
1.95
48645834--48645909
33
2.3
34
86
4
102
25
21
26
27
1.99
48651923--48652145
40
5.6
39
80
7
216
25
21
27
25
1.99
48652003--48652180
79
2.2
80
82
3
200
25
21
28
24
1.99
48657010--48657048
20
2.0
20
100
0
78
35
12
20
30
1.90
48657099--48657291
24
8.0
24
88
2
280
29
21
20
29
1.98
48657099--48657291
73
2.6
73
89
3
282
29
21
20
29
1.98
48657099--48657291
97
2.0
97
91
4
318
29
21
20
29
1.98
48673284--48673416
41
3.3
39
82
8
167
30
27
19
23
1.98
48673284--48673469
40
4.6
39
78
12
171
29
26
20
23
1.99
48673287--48673469
82
2.3
80
82
11
205
28
27
20
23
1.99
48676204--48676242
20
2.0
20
100
0
78
35
12
20
30
1.90
48676208--48676256
16
3.1
16
85
11
66
36
14
18
30
1.90
48676309--48676501
24
8.0
24
87
2
244
30
21
20
27
1.98
48676309--48676501
73
2.7
72
87
3
271
30
21
20
27
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48676309--48676501
48
4.0
48
87
3
271
30
21
20
27
1.98
48676308--48676500
97
2.0
97
89
4
300
30
22
20
27
1.98
48692674--48692911
49
4.8
49
80
6
266
24
17
27
30
1.97
48692674--48692909
99
2.4
99
87
4
325
24
17
27
30
1.97
48696993--48697019
14
1.9
14
100
0
54
11
0
29
59
1.32
48704230--48704400
93
1.8
93
88
2
263
28
26
21
23
1.99
48704222--48704397
46
3.8
46
78
10
180
29
26
20
23
1.99
48712962--48713281
47
6.7
46
77
9
243
25
21
30
23
1.99
48712928--48713240
94
3.3
94
79
7
312
24
20
30
23
1.98
48712918--48713243
141
2.3
143
81
5
374
25
21
30
23
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295