Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  284  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96543378--96543420
22
1.9
23
90
4
70
0
16
6
76
0.99
96551710--96551734
11
2.3
11
100
0
50
52
0
16
32
1.44
96566066--96566158
47
2.0
47
100
0
186
30
11
23
34
1.91
96566698--96566728
16
2.0
16
93
6
55
32
25
12
29
1.93
96574836--96574885
26
1.9
26
87
0
73
52
2
10
36
1.47
96582222--96582254
15
2.3
15
89
5
50
30
9
0
60
1.27
96583634--96583696
21
2.9
22
79
9
67
49
6
0
44
1.28
96591230--96591291
31
2.0
31
90
0
97
45
8
9
37
1.67
96593936--96593969
13
2.5
13
90
4
50
82
5
2
8
0.93
96594671--96594698
3
9.3
3
100
0
56
0
35
0
64
0.94
96615016--96615082
32
2.1
32
83
5
82
59
5
0
34
1.22
96618089--96618126
13
3.1
13
77
14
53
60
0
0
39
0.97
96618105--96618158
20
2.6
22
74
14
60
55
1
0
42
1.10
96618669--96618735
31
2.2
31
83
5
82
37
22
7
32
1.82
96621185--96621209
11
2.3
11
100
0
50
16
36
16
32
1.90
96622447--96622488
17
2.5
17
84
7
59
83
0
0
16
0.65
96622442--96622489
6
7.8
6
82
13
62
81
0
0
18
0.70
96624374--96624415
18
2.3
19
83
4
50
23
0
4
71
1.05
96625591--96625940
132
2.6
131
84
4
407
28
18
19
34
1.95
96629247--96629290
20
2.2
20
84
8
54
29
20
13
36
1.91
96637335--96637455
64
1.9
64
84
0
161
30
19
17
32
1.95
96637844--96637946
44
2.3
44
82
11
122
28
19
25
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96639433--96639481
18
2.5
20
80
16
66
28
2
4
65
1.22
96640633--96640982
132
2.6
131
85
4
425
27
17
19
35
1.94
96647235--96647282
20
2.5
20
86
3
62
62
2
8
27
1.35
96647269--96647312
17
2.4
18
77
14
54
56
9
0
34
1.31
96648541--96648637
48
2.0
48
97
0
185
31
22
8
37
1.84
96649468--96649506
18
2.2
18
90
0
60
46
5
2
46
1.38
96655995--96656052
30
2.0
29
89
3
89
58
13
15
12
1.63
96655994--96656043
15
3.4
15
76
13
50
62
14
16
8
1.54
96658423--96658466
22
2.0
23
82
13
56
27
9
9
54
1.62
96669417--96669547
47
2.8
45
72
11
122
30
29
19
20
1.97
96675057--96675232
46
3.8
46
76
7
203
30
29
19
20
1.97
96675065--96675236
93
1.8
93
93
0
299
29
30
20
20
1.97
96677914--96677951
20
1.9
20
88
0
58
18
0
2
78
0.86
96694432--96694470
17
2.2
17
86
4
51
41
5
5
48
1.47
96695061--96695097
18
2.0
18
94
5
65
70
2
0
27
1.01
96696612--96696641
15
1.9
15
93
6
51
86
0
6
6
0.70
96696612--96696642
16
1.9
16
93
0
53
87
0
6
6
0.68
96698862--96698901
10
4.0
10
84
12
55
37
0
2
60
1.11
96698859--96698901
20
2.1
21
91
4
70
39
0
2
58
1.11
96700433--96700699
125
2.1
126
91
0
428
36
17
16
29
1.91
96702163--96702208
23
2.0
23
84
12
60
45
10
6
36
1.65
96702170--96702219
23
2.2
22
82
10
57
40
14
8
38
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96706534--96706588
20
2.7
21
91
2
85
5
10
49
34
1.61
96706920--96706985
30
2.2
30
83
5
80
13
16
39
30
1.87
96707478--96707508
7
4.4
7
100
0
62
58
12
0
29
1.35
96715558--96715600
22
2.0
22
85
0
59
6
4
18
69
1.29
96716013--96716059
19
2.6
18
80
6
67
63
0
0
36
0.94
96722166--96722250
23
3.6
23
69
10
64
58
2
9
29
1.42
96722196--96722288
33
2.6
36
79
14
102
52
0
15
32
1.42
96722268--96722309
19
2.3
18
87
4
57
69
2
2
26
1.13
96722810--96722866
15
3.6
15
85
7
60
7
1
40
50
1.40
96722825--96722869
15
2.9
15
90
3
63
8
2
37
51
1.46
96723240--96724724
206
7.2
206
96
0
2720
28
23
18
29
1.98
96734864--96734914
23
2.2
23
82
0
66
64
5
7
21
1.41
96734895--96734988
39
2.6
38
83
9
117
54
0
11
34
1.37
96734960--96734991
3
10.7
3
100
0
64
65
0
0
34
0.93
96735380--96735461
13
6.9
13
73
24
74
14
0
48
36
1.44
96735382--96735467
35
2.5
35
85
11
122
13
0
50
36
1.43
96735521--96735554
17
2.0
17
88
0
50
17
2
38
41
1.65
96736071--96736118
12
4.2
11
83
2
51
66
2
0
31
1.03
96736059--96736114
24
2.3
24
81
6
69
66
1
0
32
1.03
96738744--96739243
129
3.8
128
78
7
463
27
18
19
35
1.95
96745816--96745868
22
2.4
22
87
0
79
49
5
13
32
1.65
96746280--96746387
9
11.6
9
71
14
51
40
0
4
54
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96746290--96746340
19
2.8
18
73
5
50
45
0
3
50
1.20
96749442--96749483
17
2.4
18
88
11
61
66
0
2
30
1.04
96749443--96749503
28
2.2
28
82
5
70
67
4
3
24
1.26
96750159--96750221
30
2.1
30
90
0
99
55
14
4
25
1.58
96757761--96758134
122
3.0
125
84
4
470
32
19
15
32
1.94
96761447--96761508
31
2.0
31
90
0
97
38
4
12
43
1.64
96774592--96774648
18
3.3
17
77
18
64
17
1
3
77
1.00
96774599--96774660
19
3.4
19
72
17
60
22
0
4
72
1.03
96774592--96774648
17
3.2
17
76
14
62
17
1
3
77
1.00
96779991--96780023
16
2.1
16
88
5
50
0
21
0
78
0.75
96781317--96781355
22
1.9
21
85
15
55
58
0
7
33
1.26
96781798--96781851
3
18.0
3
81
7
65
62
1
5
29
1.28
96782495--96782525
4
7.8
4
92
0
53
77
0
3
19
0.90
96782529--96782574
23
2.0
23
100
0
92
69
13
0
17
1.19
96785083--96785131
25
2.0
25
88
8
73
18
4
8
69
1.30
96785088--96785137
25
2.0
24
84
3
64
20
4
8
68
1.32
96787057--96787130
31
2.4
30
80
8
78
25
0
10
63
1.27
96791266--96791338
34
2.1
35
82
7
87
21
27
9
41
1.84
96792395--96792543
60
2.5
60
77
7
142
27
24
20
27
1.99
96798708--96798735
11
2.5
11
100
0
56
25
0
0
75
0.81
96801776--96801809
8
4.5
8
96
3
54
64
5
0
29
1.17
96801765--96801820
24
2.3
24
77
17
62
66
3
1
28
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96801769--96801816
16
3.1
15
84
6
60
64
4
2
29
1.23
96801929--96801984
20
2.8
21
73
13
64
55
5
7
32
1.50
96801963--96802098
25
5.5
24
74
14
91
54
4
6
34
1.47
96802012--96802100
12
7.2
13
71
17
57
56
3
5
34
1.40
96802039--96802087
15
3.4
15
77
11
57
57
2
4
36
1.30
96802005--96802109
50
2.1
50
83
7
131
54
3
6
35
1.45
96802013--96802123
50
2.2
52
82
8
129
55
3
6
34
1.42
96802130--96802175
25
1.9
25
86
8
69
60
0
4
34
1.16
96802665--96802839
30
5.8
30
89
1
228
20
4
48
27
1.68
96802948--96802978
14
2.2
14
100
0
62
12
0
32
54
1.38
96803331--96803401
37
1.9
37
97
0
133
12
18
23
45
1.84
96803643--96803692
14
3.6
14
81
7
57
64
4
12
20
1.43
96803570--96803766
104
1.9
105
87
3
290
45
15
16
22
1.85
96803672--96803897
76
3.0
74
83
7
287
33
21
16
28
1.95
96803922--96804506
73
7.9
73
88
2
810
32
22
16
28
1.96
96804514--96804541
14
2.0
14
100
0
56
57
7
21
14
1.61
96804523--96804746
74
3.0
72
89
4
331
32
21
17
27
1.96
96804671--96804837
91
1.8
90
86
6
239
34
19
17
28
1.95
96803922--96804903
298
3.2
299
87
8
1284
32
21
17
28
1.96
96804291--96805665
238
5.6
239
78
13
1288
34
20
17
28
1.95
96804604--96804907
164
1.9
163
90
3
486
32
22
17
27
1.96
96804912--96804943
14
2.3
14
100
0
64
62
6
12
18
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96805102--96805137
15
2.5
15
90
4
56
55
5
19
19
1.62
96805126--96805268
78
1.9
76
92
0
205
30
20
17
31
1.96
96805070--96805440
88
4.4
82
71
12
279
34
19
17
28
1.95
96805198--96805441
88
2.8
83
82
10
294
35
20
17
26
1.95
96805379--96805674
76
4.0
75
83
9
367
33
20
15
30
1.94
96805369--96805687
147
2.1
146
84
9
405
34
19
15
30
1.93
96814497--96814565
32
2.2
32
94
0
120
28
34
18
17
1.94
96815557--96815604
16
3.1
15
90
6
69
64
2
2
31
1.16
96815553--96815608
24
2.3
24
81
6
69
66
1
1
30
1.12
96815553--96815604
8
6.5
8
82
8
61
65
1
1
30
1.14

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295