Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  132  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45262223--45262256
17
1.9
18
94
5
61
11
11
2
73
1.20
45266792--45266856
21
3.2
21
68
12
55
43
20
24
12
1.86
45266778--45266874
39
2.5
39
91
3
151
40
23
22
13
1.89
45274068--45274127
28
2.1
27
100
0
84
43
6
25
25
1.78
45274022--45274173
72
2.1
74
93
5
263
39
11
24
25
1.88
45274096--45274435
46
7.4
46
90
2
499
41
13
23
20
1.89
45276398--45276431
17
1.9
18
88
5
52
35
20
0
44
1.52
45276859--45276902
18
2.4
18
85
7
54
13
11
4
70
1.31
45276872--45276915
23
1.9
23
81
9
54
20
6
4
68
1.31
45277124--45277162
19
2.1
18
85
4
51
41
10
0
48
1.37
45277130--45277166
18
2.1
19
90
10
60
32
10
0
56
1.34
45277382--45277429
20
2.4
20
74
22
55
43
18
0
37
1.51
45279608--45279854
45
5.6
45
88
4
333
25
29
21
23
1.99
45281670--45281722
27
2.0
27
85
3
72
39
20
11
28
1.87
45286656--45286689
16
2.2
15
89
5
50
23
5
2
67
1.26
45289488--45289520
17
1.9
17
88
11
50
63
6
3
27
1.32
45289963--45290110
40
3.7
40
77
10
158
28
22
22
27
1.99
45290166--45290214
25
2.0
25
91
0
80
26
20
28
24
1.99
45290530--45290595
28
2.4
28
89
5
98
21
0
28
50
1.49
45290524--45290698
7
24.4
7
68
13
79
21
0
30
48
1.51
45291067--45291328
115
2.3
115
83
0
335
30
21
17
29
1.96
45291332--45291554
74
3.0
74
83
5
267
28
15
19
36
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45291364--45291578
74
2.9
74
82
2
263
28
16
19
35
1.93
45293853--45293989
9
15.1
9
73
14
86
47
18
1
32
1.57
45293849--45293966
48
2.6
43
81
12
155
49
16
1
33
1.56
45293870--45293967
48
2.0
48
94
0
169
50
16
2
31
1.57
45296858--45297030
50
3.5
48
82
4
175
29
26
17
26
1.97
45297002--45297056
26
2.1
26
96
0
101
29
27
16
27
1.97
45296951--45297138
77
2.5
77
88
2
283
29
25
19
26
1.99
45301313--45301341
14
2.1
14
93
6
51
34
0
10
55
1.34
45302179--45302316
43
3.2
43
87
0
159
28
32
15
22
1.95
45305551--45305613
28
2.2
28
81
10
67
68
0
4
26
1.10
45305572--45305622
19
2.7
19
79
8
59
70
0
0
29
0.87
45305552--45305624
29
2.5
29
82
10
87
68
0
4
27
1.07
45305785--45305850
20
3.3
20
71
14
55
31
6
0
62
1.20
45307494--45307533
20
2.0
21
90
5
64
47
2
0
50
1.14
45309267--45309317
14
3.5
14
72
17
50
52
5
0
41
1.25
45324621--45324669
19
2.5
20
83
12
66
32
22
0
44
1.53
45325029--45325065
18
2.1
18
94
0
65
24
24
0
51
1.49
45325029--45325065
12
3.1
12
84
0
56
24
24
0
51
1.49
45325826--45325866
22
2.0
20
90
9
64
4
9
12
73
1.24
45327978--45328043
34
1.9
34
90
0
105
40
1
25
31
1.65
45329772--45329821
21
2.4
21
82
0
55
34
26
2
38
1.68
45330552--45330583
7
4.6
7
100
0
64
28
0
12
59
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45331063--45331123
30
2.0
30
87
0
86
32
37
14
14
1.87
45331176--45331218
18
2.4
18
88
0
59
20
25
9
44
1.81
45334735--45335108
126
3.0
123
88
3
525
30
16
15
37
1.90
45335186--45335264
35
2.3
34
91
2
131
45
25
0
29
1.54
45344005--45344046
20
2.1
20
86
0
57
76
2
4
16
1.07
45358430--45358754
48
6.9
47
76
14
219
27
17
30
24
1.98
45358430--45358701
94
2.9
93
82
10
306
26
17
31
23
1.97
45360520--45360723
49
4.2
49
96
1
358
28
29
8
32
1.87
45360590--45360672
27
3.3
27
63
27
72
32
30
4
32
1.79
45360546--45360745
98
2.1
95
85
7
262
33
27
7
32
1.84
45370072--45370239
46
3.6
48
84
7
190
26
16
31
25
1.96
45370124--45370283
46
3.5
45
85
6
155
26
16
31
26
1.96
45371697--45371745
21
2.3
22
79
10
57
16
10
36
36
1.82
45372342--45372400
31
1.9
31
89
0
91
38
11
13
35
1.82
45382089--45382149
20
2.9
19
76
13
59
45
11
9
32
1.73
45384129--45384169
21
1.9
22
85
5
57
70
0
17
12
1.16
45384128--45384180
17
3.0
17
72
8
52
67
0
20
11
1.21
45385981--45386044
32
2.0
32
96
0
119
35
17
15
31
1.91
45386446--45386497
21
2.4
22
78
18
63
26
11
19
42
1.85
45387031--45387060
15
2.0
15
93
0
51
40
30
6
23
1.80
45388951--45388986
18
2.0
18
100
0
72
50
16
5
27
1.68
45389119--45389352
39
6.0
39
89
2
310
33
27
18
20
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45392562--45392602
21
2.0
21
90
0
64
29
26
17
26
1.97
45392637--45392706
31
2.3
30
80
7
79
22
4
22
50
1.67
45394165--45394214
24
2.2
23
82
7
57
36
8
40
16
1.77
45394174--45394221
24
2.0
24
100
0
96
37
8
37
16
1.79
45400015--45400043
15
1.9
15
100
0
58
20
13
10
55
1.68
45410070--45410118
20
2.4
21
86
10
75
42
36
0
20
1.52
45412370--45412403
17
1.9
17
88
5
50
67
5
2
23
1.26
45415088--45415137
26
2.0
24
88
7
73
64
6
0
30
1.18
45415116--45415167
21
2.5
20
81
9
59
71
7
0
21
1.11
45415213--45415245
15
2.1
16
88
11
50
69
0
0
30
0.88
45415678--45415722
23
2.0
23
82
8
56
37
8
13
40
1.76
45420663--45420708
24
1.9
24
86
0
65
23
26
8
41
1.83
45421607--45421660
12
4.8
11
75
20
58
37
0
0
62
0.95
45421605--45421660
11
5.1
10
75
24
51
37
0
0
62
0.95
45423688--45423719
16
2.0
16
93
0
55
56
15
0
28
1.40
45423974--45424053
27
3.2
24
76
11
65
61
2
1
35
1.18
45423991--45424022
11
2.8
12
81
18
50
62
0
0
37
0.95
45424007--45424053
14
3.4
14
76
5
51
59
2
2
36
1.21
45424162--45424199
20
1.9
19
89
5
58
13
5
0
81
0.85
45425030--45425075
17
2.5
19
82
10
60
30
13
8
47
1.72
45432593--45432636
19
2.4
18
88
3
61
75
0
2
22
0.92
45432593--45432638
10
4.5
10
81
13
58
73
0
2
23
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45435010--45435117
54
2.0
54
100
0
216
44
5
5
44
1.50
45439716--45439742
6
4.5
6
100
0
54
85
0
0
14
0.61
45439731--45439772
21
2.0
20
86
4
57
57
0
2
40
1.12
45440343--45440376
14
2.4
14
90
0
50
26
5
8
58
1.51
45441813--45442205
154
2.5
154
85
3
504
30
18
25
25
1.98
45442907--45442974
34
2.0
33
83
8
84
19
0
38
42
1.51
45442928--45442974
7
7.0
7
76
9
53
17
0
38
44
1.48
45443000--45443031
15
2.1
15
94
0
55
65
0
6
28
1.16
45443855--45443950
44
2.2
44
84
1
120
23
41
2
32
1.66
45446455--45446488
16
2.1
16
94
0
59
26
0
23
50
1.50
45447303--45447879
214
2.7
209
95
2
1064
35
4
3
55
1.40
45448025--45448284
9
28.0
9
68
17
99
45
15
3
36
1.63
45448019--45448284
18
14.8
18
69
16
124
44
15
3
36
1.63
45448024--45448304
74
3.6
74
87
5
373
45
15
3
36
1.62
45453372--45453400
14
2.1
14
93
6
51
34
0
6
58
1.25
45454077--45454156
31
2.5
33
77
8
92
15
5
18
61
1.51
45454105--45454145
22
1.9
21
85
5
55
14
7
17
60
1.55
45455325--45455377
21
2.5
21
81
0
70
32
35
7
24
1.84
45457475--45457517
19
2.3
18
81
14
52
20
6
11
60
1.54
45457596--45457847
68
3.9
64
76
11
219
29
17
28
24
1.97
45460333--45460382
22
2.2
21
80
19
57
34
6
12
48
1.65
45462660--45462831
93
1.8
93
92
0
290
20
20
30
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45462664--45462838
46
3.8
46
78
13
196
20
20
30
29
1.97
45465229--45465420
40
4.8
40
83
3
233
21
29
15
33
1.94
45466310--45466442
54
2.5
54
78
0
131
24
21
29
24
1.99
45472730--45472842
38
2.9
38
86
2
136
24
23
25
25
2.00
45472846--45473129
43
6.6
43
90
0
451
11
23
33
31
1.91
45478462--45478554
38
2.4
38
85
0
114
25
21
24
27
1.99
45478558--45478755
43
4.6
43
93
0
342
12
25
32
30
1.92
45505245--45505287
23
1.9
22
85
4
59
25
25
9
39
1.85
45510742--45510918
40
4.5
40
87
4
236
24
23
27
24
2.00
45510742--45510918
79
2.2
79
86
5
234
24
23
27
24
2.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295