Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  287  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97449191--97449224
15
2.2
16
90
10
54
17
8
0
73
1.08
97450600--97450647
24
2.0
24
83
0
60
47
8
0
43
1.33
97461386--97461426
20
2.0
20
86
9
57
34
0
4
60
1.18
97466565--97466622
10
5.6
10
82
8
71
72
1
3
22
1.09
97466565--97466621
11
5.4
11
87
2
73
73
1
3
21
1.07
97470758--97470791
18
1.9
18
88
5
52
41
5
0
52
1.25
97472745--97472836
43
2.1
43
95
0
166
43
3
19
33
1.67
97485345--97485420
31
2.5
31
91
0
125
28
5
13
52
1.61
97495873--97495956
30
2.8
30
73
7
80
46
11
3
38
1.58
97499418--97499462
18
2.3
20
77
14
58
60
0
0
40
0.97
97501213--97501259
19
2.4
19
82
3
58
51
6
2
40
1.39
97506568--97506633
27
2.4
27
94
0
114
46
6
13
33
1.68
97507091--97507139
18
2.8
18
77
17
50
30
6
0
63
1.19
97511806--97511861
25
2.4
23
80
16
62
25
10
8
55
1.63
97515236--97515270
19
1.9
17
88
11
52
37
0
2
60
1.12
97515236--97515277
18
2.3
19
84
12
52
40
0
4
54
1.21
97526010--97526058
24
2.0
24
100
0
98
55
8
4
32
1.48
97527486--97527550
21
3.2
21
63
8
53
38
15
9
36
1.79
97527474--97527559
40
2.2
40
91
0
136
46
13
6
32
1.71
97527483--97527563
40
2.0
40
97
0
153
43
13
7
35
1.72
97544588--97544625
14
2.6
15
83
8
51
68
0
7
23
1.16
97544896--97544920
12
2.1
12
100
0
50
60
0
0
40
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97544921--97544954
3
11.3
3
100
0
68
67
0
0
32
0.91
97549658--97549683
13
2.0
13
100
0
52
46
23
0
30
1.53
97550850--97550904
17
3.2
17
77
12
58
45
0
1
52
1.11
97554487--97554538
15
3.2
15
73
19
50
44
1
1
51
1.23
97556098--97556135
18
2.2
17
86
13
51
44
5
0
50
1.24
97559759--97559787
6
4.8
6
100
0
58
51
0
0
48
1.00
97560353--97560478
49
2.7
47
83
3
173
48
9
1
40
1.45
97561479--97561611
67
2.0
69
84
3
180
26
9
17
47
1.77
97564838--97564885
20
2.4
21
80
13
57
62
6
4
27
1.38
97568561--97568596
3
12.0
3
100
0
72
33
33
0
33
1.58
97571281--97571318
3
12.7
3
94
0
67
34
2
0
63
1.09
97579064--97579111
23
2.1
23
84
7
62
33
4
0
62
1.14
97580890--97580932
21
2.1
20
82
4
50
34
2
0
62
1.08
97580906--97580974
9
7.7
9
71
12
52
28
2
1
66
1.14
97580946--97580979
16
2.1
17
88
5
52
32
0
0
67
0.91
97582281--97582314
12
2.8
12
95
0
59
29
0
0
70
0.87
97582532--97582574
22
2.0
22
85
0
59
58
11
11
18
1.63
97582539--97582579
11
3.7
11
80
0
55
56
9
14
19
1.66
97586359--97586432
29
2.4
32
80
13
93
40
1
17
40
1.58
97586738--97587388
75
8.5
75
86
5
799
32
17
17
32
1.93
97586611--97587388
150
5.0
151
82
6
791
33
17
17
31
1.93
97600843--97600901
25
2.3
26
80
8
77
37
5
1
55
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97600890--97600982
25
3.9
23
76
12
80
31
5
5
58
1.43
97600922--97601008
24
3.5
24
77
12
70
31
5
5
57
1.46
97600890--97601008
48
2.5
49
81
8
120
31
5
5
57
1.44
97601137--97601171
16
2.3
15
90
5
52
31
2
2
62
1.24
97602185--97602219
11
3.2
11
88
11
54
0
54
0
45
0.99
97603353--97603439
13
6.6
13
65
17
54
31
3
8
57
1.44
97616032--97616128
48
2.0
48
100
0
194
38
24
14
22
1.92
97622578--97622602
12
2.1
12
100
0
50
44
0
0
56
0.99
97623534--97623574
19
2.2
19
86
4
57
60
2
0
36
1.10
97623520--97623575
19
3.0
19
72
12
53
62
1
1
33
1.16
97623532--97623631
20
4.8
20
68
24
73
59
4
1
36
1.23
97628781--97628823
23
1.9
22
90
4
68
34
2
0
62
1.08
97634297--97634348
23
2.2
25
83
13
65
44
0
3
51
1.19
97643609--97643692
29
2.9
29
94
0
141
35
22
8
33
1.84
97646346--97646387
3
14.0
3
84
0
57
26
33
7
33
1.83
97646346--97646387
12
3.5
12
90
0
66
26
33
7
33
1.83
97646802--97646842
21
2.0
21
85
9
57
26
0
14
58
1.37
97652427--97652622
50
3.8
51
89
3
288
19
30
22
27
1.98
97652427--97652621
103
1.9
104
90
1
311
20
30
22
26
1.98
97652716--97652747
13
2.5
13
94
0
55
56
12
0
31
1.37
97652958--97653015
30
1.9
30
89
0
89
31
24
3
41
1.71
97669916--97669959
21
2.0
22
83
12
56
79
6
2
11
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97671705--97672074
87
4.3
87
74
11
215
27
20
20
31
1.98
97671745--97672074
44
7.6
45
75
10
239
26
20
21
31
1.98
97687853--97687901
25
2.0
25
88
4
73
57
0
2
40
1.10
97687886--97687977
31
3.0
31
77
16
93
55
2
3
39
1.28
97693823--97693855
15
2.3
15
89
5
50
27
12
6
54
1.60
97700454--97700485
1
32.0
1
93
0
55
96
0
3
0
0.20
97704200--97704239
3
13.3
3
100
0
80
32
0
0
67
0.91
97704258--97704314
15
3.9
15
86
9
82
57
0
10
31
1.32
97704261--97704307
13
3.4
13
88
8
58
61
0
10
27
1.29
97704277--97704317
13
3.0
13
89
7
55
58
0
9
31
1.31
97707540--97707582
15
2.9
15
78
0
50
18
37
2
41
1.63
97709315--97709353
20
2.0
20
89
0
60
41
10
10
38
1.73
97710047--97710153
55
1.9
55
88
3
162
38
12
19
29
1.88
97710288--97710379
30
3.0
31
82
7
118
40
3
2
54
1.29
97710362--97710413
26
2.0
26
85
7
70
38
3
0
57
1.17
97715622--97715682
30
2.0
30
83
0
77
52
8
8
31
1.60
97716850--97716976
42
3.0
42
86
6
170
29
26
14
29
1.95
97716935--97717058
47
2.7
46
83
2
158
29
26
16
28
1.97
97717076--97717224
31
4.8
31
89
0
217
26
26
19
28
1.99
97717200--97717328
50
2.5
51
92
2
224
24
22
17
35
1.95
97727935--97727978
7
6.3
7
91
0
70
38
2
29
29
1.69
97727891--97728019
65
2.0
65
92
0
213
33
11
24
31
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97728309--97728394
42
2.0
42
100
0
172
25
18
12
43
1.86
97728997--97729031
18
1.9
18
100
0
70
34
11
14
40
1.82
97731360--97731415
23
2.3
23
93
6
94
39
0
16
44
1.47
97731758--97731833
35
2.1
36
83
7
93
52
28
1
17
1.52
97741047--97741100
27
2.0
27
86
13
76
55
5
0
38
1.23
97746844--97746896
23
2.3
23
96
3
97
22
20
13
43
1.86
97748959--97749003
21
2.1
22
91
4
74
20
37
20
22
1.94
97752851--97753028
27
6.6
27
85
3
133
29
28
14
26
1.95
97752851--97753027
54
3.3
54
83
5
214
29
28
14
26
1.95
97752872--97753027
81
1.9
82
88
3
235
29
28
14
26
1.95
97760787--97760964
27
6.6
27
85
3
133
29
28
14
26
1.95
97760787--97760963
54
3.3
54
83
5
214
29
28
14
26
1.95
97760808--97760963
81
1.9
82
88
3
235
29
28
14
26
1.95
97764898--97764939
21
2.0
21
85
0
57
45
14
9
30
1.77
97770894--97770926
16
2.1
16
100
0
66
39
30
0
30
1.57
97775257--97775304
22
2.2
22
88
0
69
22
8
6
62
1.46
97780046--97780108
15
4.1
16
71
18
53
36
3
0
60
1.13
97780074--97780124
16
2.9
17
80
11
59
29
1
0
68
1.00
97784057--97784099
23
1.9
22
86
13
61
37
0
0
62
0.95
97788520--97788561
15
2.7
16
77
7
50
52
0
9
38
1.34
97790354--97791708
176
7.6
176
82
4
1427
28
24
18
29
1.98
97790962--97791062
44
2.3
44
84
5
132
28
26
16
27
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97791523--97791612
44
2.0
44
82
0
108
27
24
21
26
1.99
97792154--97792408
64
4.0
64
89
0
375
37
14
16
31
1.89
97793525--97793573
16
3.3
15
83
10
57
10
4
6
79
1.03
97793512--97793584
36
2.0
38
81
10
89
9
6
8
75
1.19
97795045--97795093
19
2.6
18
81
12
53
69
2
10
18
1.27
97803174--97803353
31
5.8
31
88
2
254
27
18
27
26
1.98
97803418--97803530
42
2.7
42
85
0
145
31
15
25
27
1.95
97804819--97804853
6
5.8
6
93
0
61
0
82
0
17
0.66
97811984--97812015
5
6.6
5
92
7
57
81
0
0
18
0.70
97811985--97812015
9
3.3
9
95
4
53
80
0
0
19
0.71

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295