Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A02
Parameters: 2 7 7 80 10 50 1000
Length:  100057689

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   

This is table  269  of  295  ( 35319 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92003835--92003875
20
2.0
20
100
0
82
19
14
0
65
1.26
92019563--92019610
20
2.4
20
100
0
96
45
16
33
4
1.67
92021097--92021130
12
2.8
12
86
0
50
47
11
26
14
1.79
92029447--92029576
44
3.0
44
76
4
111
26
17
27
28
1.98
92029398--92029853
178
2.6
177
83
3
587
27
17
26
28
1.97
92029398--92029907
178
2.9
177
80
4
582
27
17
26
28
1.98
92029783--92029957
88
2.0
88
88
0
260
29
22
24
23
1.99
92030173--92030312
44
3.2
44
73
6
131
32
21
16
29
1.95
92031860--92032019
27
6.1
27
67
11
84
31
5
3
59
1.36
92031946--92032008
26
2.4
25
82
12
72
36
4
0
58
1.19
92034809--92035123
46
6.8
46
89
0
389
40
14
22
21
1.90
92039440--92039470
15
2.1
15
100
0
62
19
12
25
41
1.87
92045539--92045667
50
2.5
51
88
2
197
35
16
22
25
1.94
92045645--92045853
31
6.7
31
85
6
271
29
19
24
26
1.98
92045642--92045853
93
2.3
93
87
4
320
30
18
24
26
1.98
92045875--92046044
47
3.6
48
86
6
195
28
15
27
29
1.96
92046014--92046096
42
2.0
43
87
2
123
36
13
25
25
1.92
92056617--92056660
22
2.0
23
82
8
56
36
0
0
63
0.95
92057350--92057398
25
1.9
26
83
4
64
44
18
12
24
1.84
92058802--92058840
17
2.3
17
95
0
69
51
5
20
23
1.67
92058987--92059031
14
2.9
14
87
12
54
51
0
0
48
1.00
92059111--92059167
13
4.7
13
76
23
54
43
0
0
56
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92059103--92059175
26
2.7
28
76
23
77
43
0
0
56
0.99
92058989--92059297
151
2.1
148
78
6
316
44
2
8
43
1.49
92060470--92060529
18
3.6
18
69
17
65
33
6
16
43
1.74
92061847--92062897
526
2.0
526
99
0
2093
32
15
18
34
1.92
92065150--92065176
14
1.9
14
100
0
54
22
22
37
18
1.95
92081114--92081240
24
5.2
25
73
17
90
53
4
7
33
1.51
92081209--92081254
13
3.4
14
82
11
51
54
6
2
36
1.39
92081540--92081569
12
2.4
13
94
5
53
56
6
0
36
1.26
92081655--92081692
3
12.7
3
100
0
76
68
0
0
31
0.90
92082754--92082787
15
2.2
16
89
5
52
17
5
44
32
1.73
92083640--92083697
21
2.8
20
78
12
55
43
3
0
53
1.17
92083665--92083706
10
4.2
10
76
11
50
35
0
0
64
0.94
92086893--92087158
103
2.6
104
91
0
426
19
20
30
29
1.97
92094454--92094504
26
2.0
26
96
0
93
11
23
35
29
1.90
92094375--92094637
102
2.6
103
89
3
406
19
20
30
30
1.97
92101962--92102040
40
2.0
39
90
7
124
12
25
27
34
1.92
92101870--92102134
141
1.9
142
86
4
383
18
19
29
32
1.96
92102358--92102398
21
2.0
21
85
0
55
31
21
26
19
1.97
92108141--92108243
38
2.7
38
86
0
125
33
23
19
23
1.97
92117445--92117474
13
2.3
13
100
0
60
46
0
0
53
1.00
92117914--92117952
15
2.6
15
88
8
53
28
5
2
64
1.28
92117924--92117953
15
2.0
15
100
0
60
26
6
0
66
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92117925--92117961
15
2.5
15
90
0
56
27
8
0
64
1.21
92121510--92121575
32
2.1
32
83
11
82
39
0
0
60
0.97
92122732--92123220
242
2.0
244
97
0
928
26
13
13
47
1.79
92123216--92123256
16
2.4
17
88
8
57
41
0
2
56
1.13
92123225--92123302
16
4.6
16
74
16
59
33
2
2
61
1.23
92123149--92123275
54
2.4
51
76
14
125
33
2
1
62
1.18
92123149--92123283
17
7.6
18
70
20
72
33
2
2
62
1.20
92123221--92123303
36
2.4
34
80
9
98
34
3
2
59
1.28
92123225--92123283
10
6.3
9
74
18
50
33
1
3
61
1.23
92123225--92123283
3
19.0
3
74
19
50
33
1
3
61
1.23
92123296--92123356
29
2.1
29
84
6
79
34
6
0
59
1.24
92123435--92123476
10
4.6
9
80
14
50
23
0
2
73
0.94
92123437--92123485
18
2.5
20
81
15
59
26
0
4
69
1.06
92123436--92123489
21
2.5
21
80
14
65
25
0
5
68
1.11
92127202--92127246
12
3.8
12
77
11
56
35
13
33
17
1.89
92135044--92135635
119
5.0
119
94
0
1006
33
17
18
30
1.94
92137219--92137276
17
3.5
16
78
21
66
32
1
3
62
1.22
92137194--92137290
33
3.1
34
76
16
93
34
3
2
60
1.24
92137426--92137467
10
4.6
9
80
14
50
23
0
2
73
0.94
92137428--92137476
18
2.5
20
81
15
59
26
0
4
69
1.06
92137427--92137480
21
2.5
21
80
14
65
25
0
5
68
1.11
92146041--92146133
47
2.0
46
82
2
114
23
21
23
31
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92146068--92146173
46
2.3
46
90
1
158
22
18
25
33
1.97
92149770--92149800
5
6.2
5
96
0
53
38
19
22
19
1.93
92150069--92150105
13
2.8
14
84
12
51
78
16
0
5
0.93
92150162--92150563
219
1.9
211
88
5
608
55
21
5
17
1.61
92152948--92153014
30
2.2
30
97
0
125
55
4
5
34
1.45
92155088--92155133
9
5.0
9
89
2
56
30
15
15
39
1.88
92155156--92155182
9
3.0
9
100
0
54
11
11
11
66
1.45
92167323--92167360
20
1.9
20
100
0
76
36
10
18
34
1.85
92167325--92167369
20
2.2
20
88
0
63
40
13
15
31
1.86
92170978--92171002
6
4.2
6
100
0
50
84
0
0
16
0.63
92181437--92181550
37
3.1
37
96
0
201
26
32
17
23
1.97
92181680--92182174
48
10.3
48
97
0
909
29
26
8
36
1.85
92185412--92185680
40
6.7
40
98
0
484
26
30
22
20
1.98
92205175--92205213
20
2.1
19
90
9
62
51
15
28
5
1.64
92206642--92206727
43
2.0
43
88
0
127
26
30
17
25
1.97
92206937--92206988
23
2.2
24
80
10
63
51
15
1
30
1.54
92208927--92208981
21
2.6
21
82
2
65
30
0
0
69
0.89
92209804--92209852
23
2.2
23
92
3
82
69
6
2
22
1.21
92212257--92212313
28
2.1
27
93
6
98
50
3
21
24
1.64
92219012--92219170
43
3.7
42
81
1
147
31
9
22
37
1.86
92225311--92225429
61
2.0
61
89
0
184
36
2
9
51
1.48
92234137--92234186
25
2.0
25
84
0
64
32
16
16
36
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92240701--92240737
17
2.2
18
90
9
60
67
2
0
29
1.04
92241510--92241541
8
4.1
8
92
8
57
12
12
0
75
1.06
92241511--92241541
15
2.1
15
100
0
62
12
12
0
74
1.08
92242136--92242170
13
2.6
14
81
9
54
5
14
0
80
0.89
92247484--92247520
19
1.9
19
89
10
58
45
8
5
40
1.56
92249649--92249736
46
1.9
46
85
0
122
35
15
21
27
1.94
92250286--92250424
44
3.1
44
66
10
120
30
20
25
23
1.99
92250262--92250448
89
2.1
90
85
3
270
29
19
23
26
1.98
92250286--92250449
89
1.8
89
92
0
274
29
20
25
25
1.99
92250366--92250611
134
1.8
134
85
3
352
32
20
26
20
1.97
92250597--92250945
132
2.7
132
82
5
334
29
19
24
26
1.98
92251685--92251865
3
60.3
3
70
15
108
30
3
2
63
1.24
92251700--92251865
20
7.7
23
70
22
105
30
4
1
63
1.24
92251685--92251865
17
10.1
18
69
17
108
30
3
2
63
1.24
92251709--92251759
14
3.5
14
84
12
59
33
1
0
64
1.05
92256670--92256848
91
2.0
91
97
0
340
45
16
13
24
1.84
92261001--92261070
7
10.0
7
73
6
52
42
35
0
21
1.53
92261038--92261075
14
2.7
15
84
12
53
44
36
0
18
1.50
92261275--92261367
21
4.3
22
72
9
66
43
35
0
21
1.53
92261313--92261366
14
3.7
15
76
18
60
42
40
0
16
1.48
92261424--92261463
17
2.2
19
86
8
57
17
10
2
70
1.27
92261554--92261893
41
8.4
40
80
2
329
32
23
17
26
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92261554--92261903
81
4.3
81
88
0
493
32
24
17
25
1.97
92261875--92262004
41
3.2
41
86
2
163
20
23
23
33
1.98
92263759--92264121
181
2.0
181
98
0
708
34
13
22
29
1.92
92278927--92279022
31
3.1
30
83
5
120
38
13
7
40
1.72
92282785--92282846
26
2.4
25
87
12
90
70
22
3
3
1.16
92283640--92283681
15
2.8
15
85
7
59
38
0
4
57
1.20
92283642--92283678
13
2.6
15
87
8
51
37
0
5
56
1.22
92285717--92285752
12
3.0
12
87
0
54
25
27
5
41
1.77
92285725--92285756
16
1.9
17
93
6
57
25
28
6
40
1.79
92292937--92292975
18
2.2
17
86
13
53
33
0
20
46
1.51

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295