Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A06
Parameters: 2 7 7 80 10 50 1000
Length:  115140250

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   

This is table  112  of  345  ( 41358 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37182808--37182897
46
2.0
46
84
6
121
37
17
20
24
1.93
37182808--37182897
22
4.0
21
77
11
72
37
17
20
24
1.93
37182808--37182897
45
2.0
45
84
6
119
37
17
20
24
1.93
37182833--37182926
46
2.0
46
83
8
116
40
18
14
26
1.89
37185510--37185550
21
2.0
21
85
9
57
73
0
7
19
1.07
37194188--37194214
14
1.9
14
100
0
54
37
29
18
14
1.91
37199898--37200154
129
2.0
129
89
0
388
24
11
18
45
1.82
37209427--37209453
14
1.9
14
100
0
54
51
3
0
44
1.19
37211212--37211244
10
3.2
11
83
16
52
6
0
15
78
0.93
37219166--37219486
3
107.3
3
69
14
119
61
3
5
28
1.35
37219370--37219440
23
3.1
23
82
9
76
63
0
4
32
1.14
37219371--37219414
23
1.9
23
95
0
79
61
0
4
34
1.16
37221058--37221219
45
3.6
45
79
3
202
21
24
24
29
1.99
37221049--37221237
45
4.3
44
76
4
175
21
23
24
30
1.99
37221049--37221237
89
2.1
88
93
0
315
21
23
24
30
1.99
37221282--37221507
44
5.1
44
75
8
172
26
26
19
27
1.99
37221322--37221572
132
1.9
132
87
0
367
26
24
20
29
1.99
37221339--37221653
132
2.4
132
81
1
353
28
24
19
28
1.98
37221672--37222259
130
4.5
130
77
3
500
26
23
18
31
1.98
37221716--37222173
174
2.6
172
82
4
560
27
24
17
31
1.97
37221633--37222263
44
14.5
44
73
6
379
26
23
19
30
1.98
37222636--37222734
45
2.2
46
79
3
110
25
24
18
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37228146--37228296
76
2.0
76
96
0
275
32
16
20
30
1.95
37228996--37229337
3
115.7
3
70
15
83
62
6
4
26
1.39
37229251--37229291
23
1.9
20
100
0
55
56
0
4
39
1.21
37229336--37229373
3
12.7
3
100
0
76
68
31
0
0
0.90
37232301--37232333
17
2.1
17
88
11
52
30
0
9
60
1.27
37234180--37234228
24
2.0
25
96
4
91
46
8
20
24
1.77
37235430--37235495
30
2.2
30
97
0
123
21
33
25
19
1.97
37251704--37252202
47
10.4
47
89
4
683
32
9
29
28
1.88
37252321--37252399
37
2.1
37
88
0
113
25
18
30
25
1.98
37254245--37254324
43
1.9
43
94
5
146
23
13
35
27
1.93
37254304--37254356
22
2.3
23
87
12
83
24
13
32
30
1.93
37254387--37254460
29
2.6
29
89
4
105
25
16
32
25
1.96
37254848--37255081
40
5.9
40
88
2
312
24
22
27
25
2.00
37254848--37255081
79
3.0
79
86
2
301
24
22
27
25
2.00
37258269--37258665
47
8.2
47
92
3
605
31
8
29
29
1.87
37258835--37258912
36
2.1
37
90
2
122
24
19
30
25
1.98
37262520--37262600
34
2.4
34
97
0
153
24
18
27
29
1.98
37265321--37265377
6
9.7
6
75
21
50
80
3
3
12
0.96
37265342--37265380
5
7.4
5
85
8
51
82
0
2
15
0.79
37265342--37265380
11
3.6
11
86
6
62
82
0
2
15
0.79
37266984--37267010
11
2.5
11
100
0
54
74
0
7
18
1.05
37267003--37267030
3
9.3
3
100
0
56
67
0
0
32
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37268067--37268123
29
2.0
29
92
0
96
26
33
24
15
1.95
37292267--37292417
42
3.6
42
80
7
171
32
17
23
27
1.96
37296371--37296461
45
2.0
45
93
0
155
37
24
12
26
1.90
37300070--37300120
24
2.1
24
85
10
68
56
9
11
21
1.63
37304019--37304075
28
2.2
25
84
9
69
19
14
8
57
1.62
37304019--37304063
13
3.3
13
81
9
54
17
17
8
55
1.67
37309284--37309310
12
2.2
12
100
0
54
51
0
0
48
1.00
37312307--37312345
13
2.9
13
85
14
53
35
15
0
48
1.45
37312307--37312348
14
3.1
14
93
3
68
38
16
0
45
1.48
37327838--37327957
9
13.0
9
69
15
75
31
1
2
64
1.17
37327833--37327923
17
5.1
17
72
16
69
35
2
1
61
1.15
37327838--37327957
19
6.5
18
73
14
75
31
1
2
64
1.17
37327883--37327952
29
2.4
29
77
11
81
30
0
2
67
1.05
37328006--37328033
12
2.3
12
100
0
56
42
0
0
57
0.99
37331450--37331475
6
4.3
6
100
0
52
19
19
15
46
1.85
37334631--37334720
19
5.1
17
76
11
56
34
2
2
61
1.21
37334651--37334713
27
2.3
28
78
15
69
33
3
3
60
1.28
37337671--37337710
21
1.9
21
85
10
55
25
2
5
67
1.23
37337737--37337770
3
11.3
3
100
0
68
32
0
0
67
0.91
37337799--37337829
15
2.1
15
93
0
53
19
9
0
70
1.14
37337839--37337901
26
2.4
27
75
19
71
31
4
3
60
1.33
37337981--37338005
13
1.9
13
100
0
50
24
0
0
76
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37338105--37338177
30
2.5
30
81
2
85
24
5
4
65
1.31
37338103--37338201
29
3.3
29
75
14
78
26
5
3
65
1.28
37350162--37350217
23
2.4
23
96
0
103
25
26
17
30
1.97
37351908--37351954
3
16.0
3
95
4
87
31
0
0
68
0.90
37351983--37352013
15
2.1
15
93
0
53
19
9
0
70
1.14
37352138--37352185
25
1.9
25
83
8
62
22
8
6
62
1.46
37352259--37352346
3
29.7
3
68
11
56
27
4
3
64
1.29
37353619--37353675
28
2.0
28
100
0
114
33
17
7
42
1.76
37358756--37358858
25
4.0
25
73
12
68
72
0
23
2
1.04
37358784--37358808
11
2.3
11
100
0
50
76
0
24
0
0.80
37358781--37358822
18
2.3
18
80
8
50
80
0
16
2
0.81
37358764--37358804
15
2.6
16
81
14
50
73
0
26
0
0.84
37358782--37358829
13
3.8
13
78
13
55
79
0
16
4
0.89
37362042--37362108
29
2.3
28
80
12
73
73
0
19
7
1.07
37362740--37362764
12
2.1
12
100
0
50
24
8
16
52
1.70
37365305--37365431
35
3.6
35
84
2
157
19
17
28
34
1.95
37365346--37365396
17
2.9
18
69
16
52
23
21
23
31
1.98
37366971--37367013
21
2.0
21
95
0
77
41
9
11
37
1.74
37367743--37367794
16
3.2
16
94
0
95
25
1
36
36
1.67
37367775--37367865
45
2.0
45
85
2
121
27
6
28
37
1.82
37368030--37368064
18
2.0
17
88
5
52
54
0
0
45
0.99
37368150--37368184
18
2.0
17
88
5
52
54
0
0
45
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37368013--37369136
120
9.4
120
98
0
2149
47
5
2
44
1.39
37368750--37368784
18
2.0
17
88
5
52
54
0
0
45
0.99
37374890--37374915
13
2.0
13
100
0
52
61
7
30
0
1.24
37374880--37374958
36
2.2
36
93
0
131
54
13
24
7
1.65
37376145--37376192
23
2.0
25
84
12
64
27
2
2
68
1.11
37376153--37376194
17
2.5
17
82
14
52
28
0
2
69
1.01
37376187--37376281
19
4.8
19
73
8
75
31
1
6
61
1.28
37376072--37376286
10
22.3
9
66
16
69
32
1
5
60
1.29
37378369--37378672
153
2.0
153
98
0
581
32
14
15
37
1.87
37380006--37380174
84
2.0
84
100
0
338
36
17
8
37
1.80
37391548--37391573
8
3.2
8
100
0
52
23
11
0
65
1.25
37394399--37394664
103
2.6
104
91
0
426
19
21
30
29
1.97
37396657--37396769
56
2.0
56
100
0
226
28
5
25
40
1.77
37397511--37397662
43
3.5
43
92
0
241
24
22
27
25
2.00
37398897--37399027
61
2.2
60
82
9
162
41
0
3
54
1.18
37398897--37398976
29
2.8
28
75
7
88
42
0
5
52
1.23
37401321--37401377
22
2.6
23
88
5
82
54
28
10
7
1.60
37401310--37401377
11
6.2
11
72
5
57
54
29
8
7
1.58
37404695--37404738
22
2.0
22
95
0
79
45
15
27
11
1.81
37405293--37405411
57
2.1
57
85
0
157
29
15
15
40
1.87
37407464--37407493
16
1.9
15
93
6
51
33
23
0
43
1.54
37407691--37408039
151
2.3
149
89
3
515
27
25
20
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37407691--37408039
50
7.0
50
75
6
332
27
25
20
27
1.99
37420268--37420299
10
3.3
10
95
4
57
62
0
6
31
1.20
37420962--37420997
14
2.6
14
91
4
56
22
0
0
77
0.76
37421105--37421334
118
1.9
118
88
1
345
29
29
17
23
1.97
37422246--37422296
5
10.0
5
76
19
52
78
0
0
21
0.75
37422246--37422296
11
4.5
11
84
15
68
78
0
0
21
0.75
37422248--37422290
16
2.4
19
88
11
65
79
0
0
20
0.74
37428646--37428693
20
2.5
20
86
3
62
64
2
6
27
1.28
37430018--37430192
49
3.6
49
81
10
207
29
21
29
20
1.98
37430018--37430242
49
4.6
49
77
10
203
28
20
29
21
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345