Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A06
Parameters: 2 7 7 80 10 50 1000
Length:  115140250

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   

This is table  320  of  345  ( 41358 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107846098--107846132
12
3.2
11
88
11
54
62
2
25
8
1.38
107854736--107854842
54
2.0
53
91
5
173
50
28
5
15
1.67
107855070--107855114
21
2.1
21
100
0
90
31
26
13
28
1.94
107857116--107857176
30
2.0
30
83
0
77
13
26
36
24
1.92
107858661--107858687
13
2.1
13
100
0
54
11
7
14
66
1.43
107870661--107870804
72
2.0
72
97
0
270
22
9
29
38
1.86
107879197--107879229
17
1.9
18
88
11
52
42
12
0
45
1.41
107881346--107881420
28
2.7
28
85
0
114
33
10
25
30
1.90
107884830--107885068
55
4.2
55
77
6
244
50
13
7
28
1.70
107884867--107884987
61
2.0
61
85
0
161
49
13
9
27
1.73
107884830--107885042
116
1.8
116
84
0
291
50
13
8
27
1.71
107896198--107896392
86
2.2
87
89
3
302
27
13
25
32
1.94
107896191--107896362
40
4.2
40
76
9
166
25
15
27
31
1.95
107896374--107896441
28
2.4
28
85
4
75
36
17
22
23
1.94
107903829--107904194
35
10.5
35
81
1
396
31
25
12
31
1.93
107904420--107904509
44
2.0
44
100
0
180
45
13
0
41
1.43
107910781--107910884
53
2.0
53
94
0
181
34
15
16
33
1.90
107912404--107914713
769
3.0
769
99
0
4512
36
18
19
26
1.94
107915565--107915687
55
2.2
54
80
7
131
30
31
21
16
1.95
107923589--107923633
12
3.8
12
88
5
56
17
2
0
80
0.82
107923588--107923622
6
5.8
6
87
12
54
17
0
0
82
0.66
107926094--107926135
22
2.0
22
85
4
59
28
2
2
66
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107926167--107926194
14
2.0
14
100
0
56
28
0
0
71
0.86
107926208--107926255
21
2.3
22
79
17
57
10
6
4
79
1.05
107926300--107926378
9
8.7
9
74
18
56
16
1
5
77
1.01
107940999--107941074
24
3.2
24
75
0
71
39
17
28
14
1.89
107944929--107944970
22
1.9
22
95
0
75
52
19
4
23
1.65
107945565--107945599
16
2.3
15
90
5
52
45
0
0
54
0.99
107946516--107946596
38
2.1
38
84
11
103
25
9
3
60
1.45
107946743--107946798
21
2.7
21
88
0
85
23
8
39
28
1.85
107947879--107947907
3
9.7
3
100
0
58
68
0
0
31
0.89
107948194--107948220
14
1.9
14
100
0
54
7
55
7
29
1.55
107948590--107948642
26
2.0
26
85
7
72
73
5
0
20
1.03
107949461--107949510
24
2.0
26
84
7
68
38
10
2
50
1.48
107949523--107949587
22
2.7
25
77
22
77
29
4
7
58
1.46
107949636--107949665
14
2.1
14
100
0
60
43
13
6
36
1.70
107949719--107949833
22
5.1
21
73
14
63
29
8
6
54
1.57
107950122--107950155
18
1.9
18
88
5
52
26
5
5
61
1.42
107961996--107962266
77
3.6
76
89
5
405
32
16
19
31
1.94
107962292--107962326
14
2.5
14
90
0
52
17
20
5
57
1.60
107962215--107962719
89
6.0
86
71
18
330
26
16
20
37
1.93
107962381--107962416
14
2.6
14
86
0
54
25
11
5
58
1.54
107962395--107962782
75
5.0
75
73
13
309
28
15
20
36
1.92
107962622--107962656
14
2.5
14
90
0
52
22
11
5
60
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107963510--107963536
14
1.9
14
100
0
54
7
55
7
29
1.55
107964809--107964885
24
3.2
24
75
15
70
31
6
7
54
1.54
107964814--107964877
22
2.7
24
79
20
73
29
4
7
57
1.47
107970766--107970812
23
2.1
24
84
11
64
40
0
8
51
1.33
107973724--107973779
27
2.1
27
100
0
112
33
25
5
35
1.79
107978679--107978712
17
2.0
17
88
0
50
67
5
0
26
1.13
107978662--107978765
45
2.2
47
78
10
115
59
1
0
37
1.15
107978897--107978947
18
2.8
19
80
16
63
33
0
3
62
1.13
107982682--107982723
19
2.2
20
91
4
68
71
9
4
14
1.28
107982769--107982845
38
2.0
38
97
0
145
48
2
33
15
1.59
107986324--107986349
6
4.3
6
100
0
52
15
0
0
84
0.62
107989393--107989428
18
2.0
18
88
0
54
22
8
0
69
1.15
107989752--107989778
14
1.9
14
100
0
54
37
0
11
51
1.37
107989922--107989981
28
2.3
25
82
8
75
28
5
3
63
1.31
107992438--107992509
36
2.0
36
94
0
126
25
16
25
33
1.96
107994136--107994207
26
2.7
27
89
4
110
55
1
25
18
1.50
107995096--107995122
3
9.0
3
100
0
54
33
0
0
66
0.92
107995601--107995658
29
2.0
29
83
3
73
29
10
8
51
1.65
107995752--107995804
3
17.7
3
92
0
88
30
0
1
67
1.01
108005548--108006009
174
2.7
171
86
5
646
32
27
11
27
1.92
108007227--108007270
19
2.2
21
80
15
58
61
0
2
36
1.09
108009312--108009340
14
2.0
15
93
6
51
20
6
0
72
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108010000--108010055
25
2.2
25
78
6
60
57
1
1
39
1.20
108010077--108010132
27
2.1
26
83
9
69
42
1
5
50
1.35
108010587--108010615
13
2.1
14
93
6
51
3
13
0
82
0.79
108015568--108015630
31
2.0
31
100
0
126
28
19
15
36
1.92
108019491--108019586
40
2.4
41
87
1
140
48
4
20
26
1.67
108032787--108032829
20
2.2
20
86
0
59
58
4
6
30
1.45
108033063--108033146
44
1.9
44
83
9
109
55
3
5
34
1.41
108033104--108033158
25
2.2
25
78
12
60
63
1
3
30
1.22
108033102--108033196
10
8.5
11
71
25
60
62
1
3
33
1.18
108033146--108033198
9
5.7
9
79
14
54
64
0
1
33
1.05
108033360--108033418
3
19.7
3
75
6
57
57
5
3
33
1.37
108034001--108034064
27
2.3
28
94
5
121
46
25
0
28
1.53
108034972--108035057
45
1.9
45
92
0
145
25
25
15
33
1.95
108035151--108035660
204
2.5
204
87
1
718
28
21
18
31
1.97
108047237--108047281
18
2.5
18
81
0
54
66
2
6
24
1.27
108047475--108047526
26
2.0
26
84
0
68
57
3
9
28
1.48
108047812--108047906
11
8.5
11
71
15
70
62
1
3
33
1.18
108047772--108047888
45
2.6
46
80
12
113
59
2
4
33
1.30
108047856--108047908
9
5.7
9
82
6
61
62
0
1
35
1.06
108047812--108047906
20
4.4
20
75
17
75
62
1
3
33
1.18
108051894--108051940
18
2.7
18
86
3
69
23
46
17
12
1.82
108059341--108059384
23
1.9
23
90
0
70
61
0
2
36
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108070769--108070806
20
1.9
20
89
10
60
42
2
13
42
1.57
108073980--108074023
16
2.8
17
75
25
51
36
0
2
61
1.09
108078025--108078078
17
2.7
20
75
24
60
35
3
1
59
1.26
108079521--108079600
40
2.0
40
95
0
142
17
17
25
40
1.91
108093290--108093366
8
9.1
8
72
16
57
61
3
0
35
1.15
108093310--108093359
17
3.0
17
77
8
50
58
4
0
38
1.17
108093823--108093977
71
2.2
71
96
1
285
38
7
5
47
1.56
108094851--108094884
17
2.0
17
94
0
59
50
0
0
50
1.00
108100899--108100929
12
2.5
13
89
10
55
87
0
12
0
0.55
108103321--108103373
26
2.0
26
85
7
72
64
3
1
30
1.22
108103356--108103387
16
2.1
16
94
5
57
65
3
0
31
1.08
108105704--108105748
3
15.0
3
100
0
90
33
0
0
66
0.92
108106050--108106101
21
2.4
21
74
3
50
34
7
0
57
1.27
108107798--108107833
15
2.4
15
90
0
54
63
0
2
33
1.08
108112999--108113077
30
2.6
30
90
4
115
29
46
5
18
1.70
108112999--108113113
30
3.8
30
80
2
108
29
44
4
21
1.72
108113601--108113730
23
5.5
23
69
17
72
35
4
3
56
1.35
108113666--108113815
25
6.0
26
73
12
100
34
7
4
54
1.47
108113683--108113762
30
2.7
29
84
3
79
33
5
3
57
1.38
108113751--108113813
23
2.7
22
85
11
74
34
7
4
52
1.52
108113964--108114011
16
3.1
15
90
6
69
31
2
2
64
1.16
108113964--108114015
8
6.5
8
82
8
61
30
1
1
65
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108115573--108115608
12
3.0
12
95
0
63
30
25
2
41
1.69
108120096--108120293
53
3.5
53
69
19
168
26
14
22
36
1.93
108120031--108120310
116
2.5
116
92
2
462
27
15
23
34
1.94
108120258--108120995
72
9.9
74
88
4
925
32
16
18
32
1.93
108120244--108120995
373
2.0
365
87
4
1078
32
16
18
33
1.93
108120828--108121306
167
2.9
167
88
2
678
28
18
19
32
1.96
108121014--108121156
74
1.9
75
85
5
200
31
18
22
27
1.97
108121088--108121259
93
1.8
93
82
2
220
27
21
19
31
1.97
108122069--108122169
30
3.4
30
94
0
166
28
47
3
19
1.67
108122069--108122215
30
4.9
30
87
4
158
28
44
4
22
1.71

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345