Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A06
Parameters: 2 7 7 80 10 50 1000
Length:  115140250

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   

This is table  97  of  345  ( 41358 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31897224--31897403
48
3.8
48
77
9
138
25
27
20
27
1.99
31906488--31906528
21
2.0
20
85
4
55
41
0
14
43
1.45
31907221--31907268
25
1.9
25
86
0
69
25
27
14
33
1.94
31910479--31910594
47
2.5
46
84
5
151
38
15
20
25
1.92
31910481--31910584
23
4.4
24
72
8
88
38
15
21
25
1.92
31910505--31910592
24
3.7
24
71
8
81
39
15
19
25
1.91
31914312--31914347
15
2.5
14
86
8
54
19
5
11
63
1.46
31915981--31916032
20
2.8
18
78
21
63
42
1
1
53
1.23
31915940--31916074
69
2.0
68
85
1
180
41
2
2
52
1.32
31917232--31917283
23
2.3
22
80
9
61
44
7
25
23
1.79
31917377--31917421
19
2.4
19
88
3
65
51
4
22
22
1.66
31917712--31917741
8
3.8
8
95
0
51
76
0
3
20
0.92
31919256--31919313
25
2.5
23
76
15
66
63
0
5
31
1.16
31920273--31920333
26
2.5
23
86
10
77
49
8
1
40
1.42
31921269--31921304
3
12.0
3
93
0
63
0
33
2
63
1.08
31924468--31924535
34
2.0
34
97
0
127
44
16
11
27
1.82
31935233--31935339
16
6.8
16
65
12
60
32
2
10
54
1.49
31936481--31936505
11
2.3
11
100
0
50
16
0
8
76
1.02
31936470--31936512
20
2.2
20
86
0
59
25
0
4
69
1.07
31939335--31939372
16
2.3
17
86
4
51
84
0
10
5
0.77
31941556--31941610
28
2.0
28
100
0
110
40
7
7
45
1.60
31941558--31941622
28
2.3
28
89
5
87
43
7
6
43
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31945028--31945186
43
3.7
43
72
12
114
27
23
21
27
1.99
31945028--31945186
85
1.9
85
81
7
198
27
23
21
27
1.99
31953737--31953848
28
4.1
28
89
2
147
33
22
25
17
1.96
31955081--31955134
3
18.7
3
75
21
53
68
0
27
3
1.06
31955078--31955126
18
2.8
17
82
11
71
67
0
28
4
1.09
31955078--31955134
18
3.2
17
80
11
69
68
0
28
3
1.06
31956767--31957254
47
10.4
47
93
0
805
27
30
8
33
1.87
31960206--31960542
40
8.5
40
90
1
457
26
28
22
22
1.99
31961785--31961965
54
3.3
55
92
2
305
16
22
9
51
1.74
31964212--31964256
19
2.4
19
96
0
81
44
22
8
24
1.81
31968628--31968794
46
3.6
46
77
9
160
29
19
28
22
1.98
31968628--31968941
94
3.3
94
79
8
268
26
20
29
23
1.99
31979163--31979338
50
3.5
49
82
4
192
25
17
27
29
1.97
31982138--31982210
5
13.8
5
76
16
51
73
8
1
16
1.13
31982184--31982334
77
1.9
78
97
1
286
53
11
12
21
1.70
31985578--31985739
43
3.8
43
83
2
184
29
15
22
32
1.95
31985989--31986053
32
2.0
32
93
0
112
30
10
13
44
1.78
31987906--31988438
266
2.0
268
97
1
998
23
10
25
40
1.87
31990304--31990330
10
2.7
10
100
0
54
48
22
7
22
1.75
31996379--31996472
4
22.2
4
69
23
52
71
1
6
21
1.15
31996381--31996432
15
3.8
13
77
20
52
69
1
5
23
1.20
31996438--31996468
16
1.9
16
100
0
62
77
0
9
12
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32002867--32002902
18
2.1
17
89
5
54
77
0
5
16
0.94
32008797--32009003
67
3.1
64
76
11
197
31
17
28
21
1.96
32009378--32009459
28
2.9
29
80
5
105
31
18
26
23
1.97
32009382--32009485
28
3.7
27
76
10
86
30
20
25
23
1.98
32009300--32009459
54
2.9
56
87
7
238
31
16
26
25
1.96
32009320--32009487
56
3.0
56
83
8
150
32
17
27
23
1.96
32014979--32015071
33
2.8
33
77
9
100
24
18
25
31
1.98
32026377--32026498
22
5.3
22
62
21
61
25
29
11
33
1.91
32026349--32026911
47
11.8
47
93
1
810
28
29
8
33
1.87
32028375--32028550
56
3.1
56
99
0
343
22
22
9
45
1.80
32030257--32030304
23
2.1
23
88
7
71
29
20
33
16
1.95
32048311--32048550
38
6.3
38
86
1
327
30
25
22
22
1.99
32048310--32048550
116
2.1
115
86
3
333
30
24
22
22
1.99
32056364--32056413
22
2.1
23
85
10
66
22
4
4
70
1.21
32058950--32058991
23
1.9
21
85
9
57
28
2
11
57
1.47
32059001--32059057
25
2.3
25
96
3
107
42
0
24
33
1.55
32062767--32062937
93
1.8
93
88
0
261
29
27
19
22
1.98
32062762--32062930
46
3.7
46
76
10
173
30
27
18
23
1.98
32066251--32066316
30
2.2
30
88
0
96
21
30
28
19
1.98
32066283--32066400
42
2.8
42
90
0
191
22
28
27
21
1.99
32071369--32071680
48
6.6
47
77
8
233
28
19
28
23
1.98
32071556--32071731
49
3.6
47
79
8
176
28
19
27
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32071513--32071731
98
2.3
96
84
6
273
28
20
27
23
1.99
32077350--32077400
21
2.4
21
100
0
102
35
11
7
45
1.70
32090616--32092319
568
3.0
568
99
0
3374
30
18
16
33
1.94
32100142--32100167
11
2.4
11
100
0
52
46
7
19
26
1.77
32102151--32102189
20
2.0
20
100
0
78
35
12
20
30
1.90
32102239--32102359
24
5.0
24
87
7
165
28
20
22
28
1.99
32102239--32102345
49
2.2
47
90
5
160
29
19
22
28
1.98
32102553--32102615
31
2.0
31
87
0
90
34
14
23
26
1.93
32103866--32104036
26
6.9
26
67
15
69
21
24
20
33
1.97
32104525--32104581
26
2.2
26
93
0
96
40
21
22
15
1.91
32107659--32107711
16
3.3
15
76
10
52
35
11
22
30
1.89
32122067--32122222
82
1.9
81
85
3
215
26
16
28
28
1.97
32122066--32122219
55
2.9
52
82
7
175
27
16
27
27
1.97
32122067--32122222
27
5.7
27
81
6
163
26
16
28
28
1.97
32122059--32122243
27
6.8
27
75
9
101
26
16
28
29
1.97
32122059--32122243
82
2.3
81
78
2
210
26
16
28
29
1.97
32129965--32130120
82
1.9
81
85
3
215
26
16
28
28
1.97
32129964--32130117
55
2.9
52
82
7
175
27
16
27
27
1.97
32129965--32130120
27
5.7
27
81
6
163
26
16
28
28
1.97
32129957--32130141
27
6.8
27
75
9
101
26
16
28
29
1.97
32129957--32130141
82
2.3
81
78
2
210
26
16
28
29
1.97
32138808--32138907
49
2.0
50
98
1
193
34
14
6
46
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32142137--32142176
20
2.1
19
85
4
53
50
0
17
32
1.47
32146958--32147129
49
3.5
49
78
3
152
25
30
18
26
1.98
32147930--32147968
20
2.0
20
85
10
53
35
20
0
43
1.52
32153062--32153118
22
2.4
25
80
13
68
26
3
3
66
1.24
32155528--32155645
43
2.8
41
74
18
107
27
28
18
25
1.98
32155614--32155837
50
4.6
50
76
7
219
24
27
20
27
1.99
32155614--32155899
96
2.9
96
81
7
301
24
26
20
28
1.99
32160708--32160761
24
2.2
24
83
6
65
33
7
24
35
1.83
32162578--32162612
16
2.1
17
89
5
54
8
8
0
82
0.83
32166617--32166672
29
1.9
29
92
0
94
35
7
3
53
1.46
32166734--32166809
40
1.9
40
81
5
91
34
14
7
43
1.74
32167600--32167634
11
3.2
11
92
8
54
17
0
17
65
1.27
32175310--32175389
30
2.7
30
77
11
92
45
18
12
23
1.84
32177373--32177444
33
2.2
33
82
7
85
50
18
5
26
1.68
32181669--32181759
45
2.0
45
91
0
146
25
14
23
37
1.92
32185027--32185155
29
4.4
30
72
22
80
35
3
20
40
1.69
32185141--32185214
28
2.5
28
80
8
76
37
1
10
50
1.46
32190631--32190659
15
1.9
15
100
0
58
51
6
13
27
1.66
32192014--32192046
16
2.1
16
88
5
50
78
3
9
9
1.05
32197323--32197537
27
8.0
27
84
2
198
42
16
13
27
1.86
32197370--32197537
81
2.1
81
87
0
237
42
16
11
29
1.83
32197323--32197537
54
4.0
54
85
0
250
42
16
13
27
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32217908--32217986
38
2.1
38
100
0
158
39
12
17
30
1.87
32218279--32218311
11
3.0
11
95
0
57
27
3
27
42
1.70
32233293--32233488
57
3.4
57
79
3
153
32
23
16
27
1.96
32236351--32236410
30
2.0
30
86
0
84
26
23
11
38
1.89
32238238--32238267
12
2.5
12
94
0
51
40
13
6
40
1.71
32246854--32246967
48
2.4
47
80
8
124
28
21
14
35
1.93
32251184--32251304
49
2.5
49
84
4
149
27
22
14
35
1.93
32252700--32252861
83
2.0
83
90
2
254
28
25
17
28
1.98
32257716--32257740
12
2.1
12
100
0
50
60
24
0
16
1.36
32278499--32278538
21
2.0
21
90
5
64
47
20
2
30
1.63

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345