Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A06
Parameters: 2 7 7 80 10 50 1000
Length:  115140250

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   

This is table  113  of  345  ( 41358 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37431525--37431566
22
2.0
22
85
4
59
9
40
28
21
1.84
37438605--37438673
19
3.6
19
78
11
70
44
4
0
50
1.21
37439640--37439678
18
2.0
20
85
9
55
30
5
2
61
1.31
37441976--37442013
19
2.0
20
94
5
69
42
0
2
55
1.14
37443309--37443369
17
3.4
17
74
12
68
52
14
3
29
1.58
37443300--37443371
37
1.9
37
97
0
135
48
15
5
30
1.67
37447054--37447204
27
5.6
27
82
4
169
30
27
14
27
1.95
37447054--37447203
82
1.8
81
87
4
221
30
28
14
26
1.95
37452845--37452895
9
5.7
9
75
9
50
23
3
25
47
1.69
37454578--37454631
26
2.1
25
83
10
65
74
3
20
1
1.07
37454554--37454631
22
3.6
21
76
11
70
75
3
17
2
1.07
37458390--37458552
50
3.3
50
80
6
181
27
25
17
29
1.98
37458422--37458545
48
2.5
50
84
2
153
27
25
18
29
1.98
37465801--37465981
48
3.8
48
78
2
193
28
25
16
30
1.96
37465796--37465986
96
2.0
97
86
1
267
28
25
15
30
1.96
37466101--37466130
6
5.0
6
100
0
60
50
16
0
33
1.46
37469516--37469753
50
4.8
49
85
3
291
25
26
18
28
1.98
37469516--37469754
98
2.4
97
83
6
302
25
27
18
28
1.98
37472264--37472322
30
2.0
30
93
0
100
28
15
25
30
1.96
37472655--37472781
46
2.8
44
84
7
157
25
18
32
22
1.97
37477973--37478087
38
3.0
38
96
1
203
21
24
29
24
1.99
37480430--37480464
14
2.6
14
90
4
54
54
0
2
42
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37480422--37480564
59
2.3
62
75
12
143
58
0
6
34
1.30
37480537--37480657
18
6.4
18
71
21
61
68
2
1
27
1.11
37480607--37480656
8
6.0
8
83
6
64
72
0
2
26
0.96
37481105--37481131
9
3.0
9
100
0
54
66
0
0
33
0.92
37483934--37484181
133
1.9
134
82
7
317
25
24
19
31
1.98
37483962--37485563
177
9.1
177
89
2
2361
27
22
18
31
1.97
37503866--37503983
28
4.2
27
76
14
96
25
30
13
30
1.94
37503879--37503983
28
3.8
28
78
6
97
25
30
13
30
1.94
37507114--37507317
40
5.1
39
88
4
275
26
27
22
23
1.99
37509404--37509449
19
2.4
20
85
7
60
39
13
23
23
1.90
37525215--37525253
15
2.4
17
87
8
55
28
2
5
64
1.28
37525257--37525343
20
4.5
20
74
14
76
33
5
2
58
1.34
37526385--37526431
21
2.2
22
78
17
55
17
2
17
63
1.40
37532210--37532291
9
8.6
9
69
20
51
70
4
0
24
1.06
37532207--37532291
18
5.0
17
72
15
68
69
4
0
25
1.08
37535200--37535237
15
2.5
15
86
4
58
18
2
21
57
1.52
37537203--37537255
21
2.5
21
84
0
70
30
33
9
26
1.88
37537564--37537614
20
2.7
18
79
11
57
29
3
9
56
1.49
37537622--37537681
22
2.8
21
80
10
59
36
1
0
61
1.06
37537637--37537684
20
2.4
20
86
6
71
37
0
0
62
0.95
37542093--37542132
18
2.2
18
100
0
80
65
5
0
30
1.14
37546177--37546235
27
2.2
27
84
6
75
27
15
22
35
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37546464--37546488
10
2.5
10
100
0
50
32
32
24
12
1.91
37549762--37549824
24
2.7
23
87
4
90
22
22
20
34
1.96
37549764--37549845
23
3.5
23
85
6
96
23
21
20
34
1.97
37549967--37550110
19
7.5
19
71
11
98
36
7
18
38
1.79
37549975--37550109
57
2.4
57
87
3
182
36
8
18
37
1.81
37565089--37565217
44
3.0
43
80
10
129
26
29
18
25
1.98
37565336--37565407
28
2.6
28
86
0
90
29
26
12
31
1.93
37581827--37582051
40
5.7
40
86
5
296
24
22
28
25
2.00
37581827--37582074
119
2.1
119
81
7
281
25
21
27
25
1.99
37589738--37589961
40
5.7
40
85
6
287
24
22
27
25
2.00
37589738--37589961
79
2.8
80
84
8
271
24
22
27
25
2.00
37589738--37589994
79
3.3
79
82
8
222
25
21
27
24
1.99
37605624--37605690
33
2.0
33
97
0
125
23
26
8
40
1.84
37611763--37611818
28
2.0
28
85
0
76
46
14
16
23
1.83
37614516--37614545
15
1.9
16
93
6
53
43
0
0
56
0.99
37616181--37616215
3
11.7
3
100
0
70
65
0
34
0
0.93
37618819--37618859
22
2.0
21
86
13
59
9
26
0
63
1.25
37620501--37620712
53
3.9
53
78
3
208
38
17
22
20
1.93
37625806--37625991
48
3.9
48
80
3
212
25
30
16
26
1.97
37632384--37632617
48
4.9
48
86
0
261
26
30
17
25
1.97
37634416--37634453
20
1.9
20
84
10
51
76
5
18
0
0.97
37634485--37634537
17
3.1
17
81
5
54
77
3
1
16
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37638252--37638277
13
2.0
13
100
0
52
38
7
30
23
1.83
37644434--37644508
30
2.5
30
84
0
105
16
26
32
25
1.96
37650031--37650251
48
4.7
47
77
8
200
28
21
27
22
1.99
37650031--37650250
46
4.7
46
78
8
212
29
21
27
21
1.99
37650031--37650252
94
2.4
95
80
3
236
28
21
27
22
1.99
37655660--37655697
19
2.0
20
85
15
53
39
23
0
36
1.55
37655927--37656097
93
1.8
93
92
0
288
28
28
21
22
1.99
37655922--37656094
46
3.7
46
79
10
199
29
27
20
22
1.99
37656517--37656576
30
2.0
30
86
0
84
33
25
5
36
1.78
37661935--37662056
46
2.6
47
81
3
140
31
22
24
20
1.98
37662117--37662239
49
2.5
49
84
4
158
30
22
25
21
1.98
37662023--37662239
93
2.3
96
80
10
223
27
22
26
23
2.00
37663975--37664125
70
2.1
71
82
3
180
29
23
19
27
1.98
37667964--37668035
37
1.9
37
94
0
126
20
11
29
38
1.87
37672258--37672355
37
2.6
37
96
0
178
23
30
21
24
1.99
37672496--37672632
48
2.9
48
95
0
238
29
28
6
35
1.83
37677158--37677560
216
1.9
216
93
0
689
27
12
18
40
1.87
37678914--37679087
46
3.8
46
75
11
167
21
22
27
28
1.99
37678911--37679081
92
1.8
93
88
1
263
22
22
27
27
1.99
37685363--37685408
20
2.3
20
92
0
74
47
17
2
32
1.60
37687724--37687787
24
2.7
24
97
0
119
21
34
15
28
1.94
37687700--37687820
48
2.5
48
76
9
120
23
29
14
32
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37698214--37698300
24
3.6
24
86
7
106
25
31
16
27
1.96
37698237--37698323
24
3.6
24
85
0
102
25
32
18
24
1.97
37707821--37707880
28
2.1
28
100
0
120
28
6
28
36
1.82
37711039--37711443
46
8.8
46
90
2
521
40
14
23
20
1.90
37713928--37714015
19
4.6
19
100
0
176
15
35
32
15
1.90
37716597--37716850
46
5.4
46
79
8
221
27
18
30
22
1.98
37716639--37716850
93
2.3
94
80
8
227
27
19
30
22
1.98
37720095--37720165
36
2.0
36
88
5
108
25
21
12
40
1.88
37724431--37724481
18
2.7
18
84
6
66
33
0
3
62
1.13
37724439--37724480
17
2.5
17
85
11
59
33
0
4
61
1.17
37724434--37724480
17
2.8
16
84
9
58
34
0
4
61
1.15
37728751--37728925
45
3.9
45
86
3
226
20
23
21
34
1.96
37729653--37729748
47
2.0
48
90
8
151
43
12
13
30
1.81
37731619--37731811
94
2.1
94
94
0
341
40
16
17
25
1.90
37733932--37733986
22
2.5
22
85
5
76
56
10
1
30
1.44
37734459--37734503
6
6.6
7
87
9
51
11
2
0
86
0.65
37734465--37734503
15
2.6
14
84
11
51
10
2
0
87
0.65
37735072--37735179
45
2.4
45
87
3
155
43
19
16
20
1.88
37736280--37736304
3
8.3
3
100
0
50
68
0
0
32
0.90
37736556--37736610
20
2.7
20
81
16
67
56
1
1
40
1.21
37741089--37741142
26
2.1
26
86
6
74
44
22
20
12
1.85
37741176--37741252
26
3.0
24
72
9
64
38
20
19
20
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37744116--37744155
14
2.7
16
74
18
50
45
0
0
55
0.99
37744275--37744304
9
3.2
9
90
9
51
50
0
0
50
1.00
37745839--37745876
18
2.1
18
85
9
51
63
13
0
23
1.30
37747873--37747918
24
2.0
24
86
4
67
80
0
8
10
0.91
37748604--37748664
19
3.1
19
81
9
70
47
1
0
50
1.10
37748900--37748944
13
3.5
13
81
0
54
42
22
11
24
1.86
37752747--37752873
66
1.9
66
100
0
254
32
9
22
36
1.86
37752756--37752899
66
2.3
60
87
11
193
31
7
25
35
1.84
37760249--37760364
16
7.2
16
90
4
164
32
25
2
38
1.70
37765594--37765623
16
1.9
15
93
6
51
90
0
10
0
0.47

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345