Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A06
Parameters: 2 7 7 80 10 50 1000
Length:  115140250

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   

This is table  321  of  345  ( 41358 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108122776--108122915
25
5.8
25
75
9
87
35
6
2
55
1.41
108122863--108122909
23
2.0
23
91
8
76
36
8
4
51
1.52
108123063--108123114
8
6.5
8
78
8
52
30
1
3
63
1.23
108123063--108123115
24
2.2
25
80
10
65
30
3
3
62
1.30
108123078--108123107
15
1.9
16
93
6
53
36
0
0
63
0.95
108124812--108124872
25
2.6
22
85
14
95
13
8
18
60
1.56
108128814--108128848
17
2.1
17
94
0
61
40
5
25
28
1.78
108136549--108136692
56
2.6
56
89
0
207
30
14
22
32
1.94
108136560--108136722
56
2.9
56
85
1
166
29
14
23
33
1.94
108142279--108142317
15
2.5
15
87
4
51
64
0
2
33
1.08
108144389--108144425
18
2.1
17
95
5
65
45
0
5
48
1.25
108145820--108145971
3
49.7
3
69
7
74
29
8
2
59
1.41
108145836--108145965
28
4.8
28
75
13
112
29
9
2
59
1.41
108145820--108145965
53
2.7
55
77
12
140
30
8
2
58
1.43
108145837--108145966
14
9.5
14
68
18
87
29
9
2
59
1.41
108145901--108145978
14
5.5
15
73
13
67
30
10
0
58
1.31
108149784--108149829
19
2.4
19
85
7
58
26
23
10
39
1.88
108152233--108152506
46
6.0
46
89
0
352
40
14
23
21
1.89
108152229--108152501
92
3.0
92
88
0
393
41
13
23
21
1.89
108152788--108152820
17
2.0
17
94
5
59
48
0
15
36
1.45
108161298--108161442
44
3.3
44
67
11
125
31
22
25
20
1.98
108161246--108161662
88
4.7
88
90
1
624
32
21
23
22
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108161320--108161758
44
10.0
45
68
13
184
33
21
23
21
1.98
108161511--108161794
132
2.2
132
87
2
401
33
21
21
23
1.97
108161643--108162156
88
5.8
88
83
2
573
33
22
22
21
1.97
108161423--108161875
220
2.1
220
88
2
669
33
22
21
22
1.97
108161335--108161970
308
2.1
308
88
1
927
33
21
22
22
1.97
108161253--108162037
396
2.0
396
87
0
1131
33
21
23
21
1.97
108163596--108163759
3
53.7
3
68
7
89
29
7
2
60
1.38
108163612--108163754
28
5.4
28
79
12
126
28
8
2
60
1.37
108163681--108163756
25
3.0
25
84
13
93
28
9
0
61
1.26
108163613--108163754
13
10.5
14
72
16
104
28
8
2
60
1.37
108166287--108166327
9
4.3
9
82
11
55
53
0
0
46
1.00
108168358--108168382
13
1.9
13
100
0
50
40
4
0
56
1.18
108175576--108175802
87
2.6
89
83
2
269
34
16
17
31
1.93
108175546--108175802
45
5.8
45
75
4
216
33
18
16
31
1.93
108176015--108176057
22
2.0
20
86
8
59
48
0
0
51
1.00
108176106--108176172
27
2.5
27
87
0
98
22
25
23
28
1.99
108176401--108176440
21
1.9
21
90
10
64
52
0
0
47
1.00
108177009--108177089
29
3.1
27
71
20
66
62
0
0
37
0.95
108181687--108181728
18
2.3
19
80
12
52
54
2
0
42
1.13
108186480--108186531
26
2.0
26
82
14
63
9
26
0
63
1.25
108187660--108187711
21
2.4
22
90
6
79
57
7
0
34
1.27
108188180--108188214
10
3.7
9
88
11
52
28
0
2
68
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108188165--108188219
19
2.9
19
84
10
69
27
1
5
65
1.25
108190367--108190575
91
2.3
91
85
0
274
30
22
15
31
1.95
108192535--108192762
46
5.0
46
92
1
350
21
24
15
38
1.92
108193443--108193510
30
2.3
30
84
5
84
27
19
5
47
1.72
108199237--108199283
16
3.0
16
78
3
51
46
6
0
46
1.28
108199700--108200063
180
2.0
183
91
2
599
24
11
22
41
1.87
108202717--108202794
26
2.9
26
92
3
120
46
0
14
39
1.44
108203072--108203224
56
2.7
56
97
0
288
52
6
3
37
1.43
108203109--108203206
27
3.6
27
70
22
87
57
5
4
33
1.40
108203075--108203217
27
5.2
26
65
24
78
53
6
3
36
1.45
108203734--108203801
30
2.3
30
78
0
73
14
19
38
27
1.91
108204305--108204344
7
5.7
7
87
0
62
57
15
0
27
1.38
108204298--108204344
14
3.3
15
77
22
57
57
14
0
27
1.38
108204310--108204349
21
2.0
20
94
0
62
57
15
2
25
1.50
108205283--108205379
47
2.0
48
88
2
142
56
3
7
32
1.42
108205524--108205595
20
3.5
20
74
11
56
41
1
26
30
1.64
108208233--108208276
16
2.8
16
86
6
54
70
2
11
15
1.26
108220871--108220900
15
1.9
16
93
6
53
33
3
16
46
1.64
108222781--108222814
16
2.2
15
89
5
50
52
11
5
29
1.61
108223370--108223508
55
2.5
55
95
1
242
35
1
6
56
1.34
108225049--108225087
19
2.1
19
90
0
60
56
0
5
38
1.22
108225284--108225338
21
2.6
21
85
0
65
29
9
30
30
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108229723--108230138
226
1.9
216
88
5
618
48
18
17
16
1.81
108234613--108234656
21
2.1
21
86
0
61
13
2
9
75
1.14
108234639--108234749
11
9.8
11
71
12
73
28
6
2
62
1.34
108236155--108236197
16
2.7
16
81
0
50
34
4
0
60
1.17
108237894--108237955
26
2.4
26
74
15
67
35
0
6
58
1.24
108238370--108238401
5
6.2
5
96
3
55
40
0
0
59
0.97
108239227--108239263
19
2.1
19
85
10
51
40
0
16
43
1.48
108241847--108241998
67
2.3
66
82
4
175
29
16
30
23
1.96
108244876--108244920
17
2.6
17
82
0
54
75
0
13
11
1.05
108257446--108257551
24
4.4
24
68
7
61
35
20
23
19
1.96
108261503--108261565
29
2.2
29
88
0
90
33
6
6
53
1.51
108261519--108261581
29
2.2
29
82
5
74
26
7
9
55
1.59
108264962--108264998
2
18.5
2
94
0
56
45
0
5
48
1.25
108274719--108274771
18
2.9
18
80
0
61
37
15
11
35
1.83
108275195--108275249
25
2.3
24
84
6
67
41
12
0
45
1.42
108275998--108276033
15
2.5
15
90
4
56
0
33
0
66
0.92
108276285--108276424
41
3.5
40
81
12
160
27
22
23
25
2.00
108276315--108276424
41
2.7
41
97
0
202
25
23
22
28
2.00
108276316--108276451
41
3.3
41
88
3
195
27
21
20
30
1.98
108276739--108276790
14
3.7
14
73
0
50
21
1
28
48
1.61
108276970--108277009
15
2.7
15
85
11
55
25
7
42
25
1.80
108277019--108277067
22
2.2
22
81
0
53
24
2
36
36
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108277408--108277441
17
1.9
18
88
5
52
35
0
2
61
1.11
108282314--108282578
110
2.5
107
91
3
426
35
4
4
55
1.41
108282461--108282500
5
8.2
5
83
5
55
27
0
0
72
0.85
108282455--108282501
15
3.4
14
82
8
60
31
0
0
68
0.90
108282728--108282856
38
3.5
37
77
16
140
46
14
1
37
1.54
108282713--108282819
18
5.8
18
68
14
67
44
14
1
39
1.55
108282760--108282818
9
6.6
9
76
0
55
45
16
1
35
1.58
108282718--108282861
74
1.9
74
94
0
252
46
13
2
37
1.56
108282766--108282856
9
9.9
9
71
15
62
47
15
1
36
1.53
108287883--108287911
14
2.1
14
93
6
51
34
0
10
55
1.34
108288337--108288396
21
2.9
21
84
0
75
31
23
43
1
1.64
108288781--108288965
42
4.3
43
88
1
221
26
27
16
29
1.97
108288835--108288965
42
3.1
42
95
1
226
25
28
16
29
1.96
108289797--108289863
34
2.0
34
94
2
118
43
11
13
31
1.80
108293590--108293747
86
1.8
85
81
10
196
32
6
11
49
1.64
108294374--108294407
7
5.0
7
92
7
61
44
0
0
55
0.99
108294374--108294407
13
2.5
13
95
4
59
44
0
0
55
0.99
108297909--108297941
6
5.7
6
89
7
50
18
24
0
57
1.40
108297909--108297942
11
2.9
12
86
8
52
17
23
0
58
1.38
108297909--108297941
17
1.9
17
93
0
57
18
24
0
57
1.40
108300651--108300702
25
2.0
25
88
3
77
63
7
3
25
1.38
108300650--108300695
14
3.4
14
76
14
51
67
8
4
19
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108312278--108312349
18
4.1
17
71
16
58
54
0
8
37
1.31
108314030--108314055
13
2.0
13
100
0
52
69
0
23
7
1.14
108314397--108314445
25
2.0
25
87
0
71
55
4
22
18
1.60
108325409--108325473
14
4.4
14
69
17
51
40
0
1
58
1.07
108327973--108328028
27
2.1
27
86
0
76
37
23
23
16
1.93
108337955--108338012
22
2.6
22
78
5
64
62
6
10
20
1.50
108344194--108344256
29
2.1
30
88
2
92
23
7
17
50
1.72
108344544--108344586
18
2.5
17
76
3
50
34
0
2
62
1.08
108345431--108345489
31
1.9
31
86
6
84
57
6
15
20
1.60
108363355--108363419
19
3.2
21
67
20
57
13
26
20
40
1.89

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345