Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A06
Parameters: 2 7 7 80 10 50 1000
Length:  115140250

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   

This is table  99  of  345  ( 41358 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32616656--32616948
149
2.0
149
93
0
496
38
14
23
22
1.91
32617310--32617342
17
2.0
17
88
5
50
48
3
15
33
1.60
32638147--32638172
13
2.0
13
100
0
52
7
46
0
46
1.31
32638594--32638650
30
1.9
30
92
0
96
33
12
26
28
1.92
32638992--32639256
47
5.7
44
76
13
203
28
18
29
23
1.98
32638994--32639256
94
2.8
91
79
10
282
28
19
28
23
1.98
32646124--32646182
30
2.0
30
89
0
91
33
13
23
28
1.93
32646490--32646707
44
4.7
46
78
10
192
28
19
28
23
1.98
32650242--32650417
46
3.8
45
81
10
212
21
21
29
28
1.98
32650238--32650409
93
1.8
93
94
0
308
20
21
30
27
1.98
32653334--32653402
15
4.6
15
83
0
84
11
17
13
57
1.64
32653325--32653412
30
3.0
30
81
8
99
10
17
15
56
1.66
32665495--32665549
25
2.2
25
83
6
67
25
16
21
36
1.94
32666686--32666715
16
1.9
16
93
6
53
30
0
20
50
1.49
32676858--32677072
46
4.6
46
75
11
181
29
19
28
22
1.98
32679041--32679091
25
2.0
25
84
0
66
21
3
13
60
1.49
32679494--32679533
13
3.2
13
92
3
64
32
20
27
20
1.97
32686309--32686410
51
2.0
51
98
0
195
37
12
11
38
1.80
32689741--32689784
22
2.0
22
82
13
54
2
11
20
65
1.35
32690009--32690046
18
2.1
18
90
9
60
44
2
5
47
1.39
32693402--32693438
7
5.3
7
96
0
65
32
10
40
16
1.83
32694446--32694470
12
2.1
12
100
0
50
16
8
16
60
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32695238--32695507
47
5.7
47
74
12
214
28
20
28
22
1.98
32702784--32703103
47
6.8
47
73
12
219
25
19
30
24
1.98
32702783--32703001
94
2.4
91
81
6
244
23
18
31
26
1.98
32710032--32710072
12
3.5
12
87
9
50
19
0
9
70
1.14
32710041--32710076
17
2.2
16
90
5
54
19
0
2
77
0.88
32713533--32713717
40
4.6
40
92
1
291
23
20
27
28
1.99
32713533--32713805
80
3.6
79
82
11
327
24
21
27
27
1.99
32713689--32713746
29
2.0
29
100
0
116
20
20
27
31
1.98
32713719--32713804
39
2.2
39
81
8
95
26
23
25
24
2.00
32722824--32722850
12
2.2
12
100
0
54
48
14
22
14
1.81
32738829--32738940
43
2.6
43
78
12
140
24
16
27
31
1.97
32740804--32740835
15
2.1
15
94
0
55
0
28
0
71
0.86
32740839--32740885
24
1.9
25
82
4
60
14
25
2
57
1.49
32743852--32743893
20
2.0
22
86
9
61
42
7
9
40
1.65
32743866--32743904
20
2.0
19
85
5
51
41
5
7
46
1.55
32745018--32745050
5
6.6
5
100
0
66
81
0
0
18
0.68
32757091--32757119
2
14.5
2
100
0
58
51
0
0
48
1.00
32758222--32758253
6
5.3
6
100
0
64
34
15
0
50
1.45
32762487--32762599
5
22.8
5
99
0
219
40
0
20
38
1.53
32769618--32769703
31
2.9
30
79
5
84
40
9
11
38
1.74
32772103--32772175
33
2.2
33
80
7
78
30
4
6
58
1.43
32774795--32774855
28
2.2
29
83
13
85
47
4
6
40
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32775161--32775200
21
1.9
21
85
10
55
47
10
7
35
1.65
32775259--32775356
3
33.7
3
71
20
57
63
5
2
29
1.27
32775246--32775333
27
3.1
28
73
18
83
62
7
0
29
1.23
32775250--32775368
60
2.1
56
81
12
134
63
6
2
26
1.32
32785365--32785459
47
2.0
47
100
0
190
28
14
21
35
1.93
32786553--32786583
16
1.9
16
100
0
62
25
32
16
25
1.96
32790321--32790392
16
4.5
15
82
3
63
36
8
25
30
1.85
32790322--32790392
32
2.2
32
82
9
83
35
8
25
30
1.86
32790374--32790468
44
2.1
44
82
3
118
35
5
24
34
1.78
32790640--32790672
17
1.9
17
100
0
66
63
0
0
36
0.95
32794943--32795005
32
2.0
32
96
0
117
17
22
7
52
1.70
32795209--32795235
12
2.2
12
100
0
54
59
33
0
7
1.25
32798182--32798254
26
2.8
26
80
0
74
49
8
17
24
1.74
32803474--32803564
27
3.4
26
77
6
83
31
14
24
29
1.94
32806917--32807038
34
3.6
34
90
0
181
22
25
23
28
1.99
32806917--32807060
68
2.1
68
87
2
200
22
26
22
28
1.99
32809666--32809703
19
2.0
20
84
5
51
57
0
15
26
1.38
32812168--32812219
27
1.9
27
96
0
95
34
19
21
25
1.96
32814694--32814727
17
2.0
17
100
0
68
29
17
23
29
1.97
32819922--32819982
30
2.0
31
83
3
79
37
21
11
29
1.88
32823560--32823794
70
3.3
71
80
8
205
37
11
20
29
1.89
32823530--32823794
35
7.5
34
78
9
119
38
11
20
29
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32825746--32825780
17
2.0
18
88
5
54
37
0
11
51
1.38
32825883--32826118
125
1.9
126
81
4
289
34
18
19
27
1.95
32826019--32826408
135
2.9
134
80
6
338
31
19
18
31
1.96
32831303--32831719
47
8.6
47
87
7
591
33
8
29
28
1.87
32836029--32836174
35
4.3
34
74
14
133
15
10
28
45
1.79
32839211--32839270
7
8.6
7
79
17
63
43
1
1
53
1.20
32839267--32839292
13
2.0
13
100
0
52
69
0
0
30
0.89
32839306--32839335
15
1.9
16
93
6
53
66
10
13
10
1.44
32840235--32840372
40
3.5
40
74
6
138
28
18
23
29
1.98
32841191--32841233
18
2.4
18
92
0
68
46
4
0
48
1.22
32841196--32841238
18
2.6
16
79
13
50
48
2
0
48
1.14
32842766--32842801
17
2.1
17
100
0
72
47
5
5
41
1.50
32845267--32845628
49
7.6
49
77
5
244
25
29
18
27
1.98
32845455--32845628
46
3.7
46
79
6
181
25
29
17
27
1.97
32845310--32845637
94
3.4
96
79
6
328
25
28
17
27
1.98
32848214--32848252
18
2.1
19
86
13
55
53
2
38
5
1.37
32849053--32849326
137
2.0
138
89
3
428
39
8
5
46
1.58
32860035--32860063
14
2.1
14
100
0
58
58
0
0
41
0.98
32861500--32861618
43
2.8
43
88
1
177
24
23
30
21
1.99
32861600--32861704
40
2.6
40
72
1
93
27
19
28
24
1.98
32865219--32865262
22
2.0
22
91
4
72
56
2
13
27
1.49
32867363--32867454
48
1.9
48
91
4
150
27
20
25
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32867364--32867484
48
2.5
48
82
5
138
28
19
26
24
1.99
32874108--32874245
48
2.9
47
81
4
152
29
19
23
27
1.98
32875659--32875720
28
2.2
28
88
0
88
19
14
38
27
1.90
32876058--32876089
16
2.0
16
93
0
55
37
12
9
40
1.75
32876076--32876393
27
11.8
26
82
5
298
40
21
8
29
1.82
32876076--32876393
54
5.9
54
83
3
374
40
21
8
29
1.82
32876374--32876462
27
3.3
27
85
0
115
38
15
15
30
1.89
32881600--32881666
34
2.0
34
100
0
134
34
8
5
50
1.58
32885409--32885449
21
2.0
21
85
9
57
34
31
7
26
1.84
32886227--32886258
5
6.4
5
100
0
64
18
0
0
81
0.70
32894288--32894580
47
6.2
47
83
2
273
25
27
20
25
1.99
32896070--32896114
14
3.0
16
84
12
60
60
13
15
11
1.60
32899502--32899881
48
8.0
48
78
4
315
26
28
18
25
1.98
32899502--32899872
190
1.9
191
81
3
444
25
29
19
25
1.98
32905418--32905444
13
2.1
13
100
0
54
29
25
29
14
1.95
32909484--32909659
46
3.8
46
75
10
187
21
21
29
28
1.98
32909481--32909652
93
1.8
93
91
0
281
21
21
29
27
1.99
32917815--32917884
25
2.8
26
80
4
81
27
22
21
28
1.99
32921583--32921638
29
1.9
29
96
0
103
17
19
28
33
1.95
32921847--32921917
25
2.9
25
87
2
108
23
23
25
26
2.00
32921972--32922024
11
5.0
11
75
9
56
33
18
13
33
1.90
32926684--32926803
63
1.9
63
82
3
152
32
5
28
34
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32942938--32942973
6
6.0
6
96
0
54
11
0
55
33
1.35
32945548--32945588
14
2.7
15
85
11
57
51
0
0
48
1.00
32946444--32946527
30
2.8
30
92
0
132
20
5
46
27
1.73
32947397--32947438
21
2.0
21
90
4
68
45
2
0
52
1.13
32951468--32951497
3
10.0
3
92
0
51
36
30
0
33
1.58
32952269--32952368
52
1.9
52
100
0
200
46
4
10
40
1.56
32952291--32952372
25
3.2
25
61
19
60
48
3
8
39
1.51
32953121--32953164
14
3.1
14
83
9
54
38
0
0
61
0.96
32953213--32953252
19
2.2
19
86
13
57
57
0
2
40
1.12
32959568--32959612
17
2.7
18
76
13
51
44
11
15
28
1.81

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345