Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A12
Parameters: 2 7 7 80 10 50 1000
Length:  102106374

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   

This is table  211  of  311  ( 37258 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72615703--72615749
20
2.4
19
83
16
60
70
0
8
21
1.14
72615801--72615827
14
1.9
14
100
0
54
55
0
0
44
0.99
72615806--72615923
37
3.3
37
79
8
104
55
3
1
38
1.26
72615901--72615937
15
2.6
14
87
8
56
62
0
0
37
0.96
72615986--72616041
22
2.7
19
81
15
58
82
1
5
10
0.91
72615989--72616039
18
2.9
17
82
5
57
82
1
5
9
0.91
72616063--72616116
16
3.2
17
79
7
58
79
1
11
7
1.00
72616063--72616118
17
3.3
16
78
9
58
78
1
12
7
1.02
72617482--72618150
212
3.2
208
92
2
1126
42
6
11
39
1.68
72618255--72618328
29
2.5
29
88
4
103
50
13
14
21
1.78
72630030--72630060
12
2.6
12
100
0
62
25
35
25
12
1.92
72630349--72630380
3
10.7
3
100
0
64
68
31
0
0
0.90
72636181--72636229
22
2.2
21
79
10
53
38
0
4
57
1.18
72636857--72636996
76
1.9
75
89
4
219
30
10
12
46
1.75
72641988--72642034
21
2.2
22
92
7
80
36
0
8
55
1.31
72644041--72644110
31
2.3
30
82
7
79
50
2
7
40
1.45
72644395--72644436
19
2.3
19
87
4
59
42
11
0
45
1.41
72647054--72647082
3
9.7
3
100
0
58
68
0
31
0
0.89
72649371--72649428
26
2.1
27
84
12
75
32
0
5
62
1.18
72656025--72656107
42
2.0
42
100
0
166
16
24
19
39
1.91
72656096--72656150
11
5.2
11
74
12
53
7
12
1
78
1.04
72656121--72656149
12
2.5
12
94
5
51
3
6
0
89
0.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72656223--72656268
21
2.1
23
92
8
78
39
0
2
58
1.10
72656223--72656268
22
2.1
22
88
8
67
39
0
2
58
1.10
72656223--72656300
35
2.2
33
85
14
104
39
0
1
58
1.06
72656245--72656304
13
4.9
13
76
17
58
40
0
1
58
1.08
72656264--72656321
20
2.9
20
80
14
66
43
0
0
56
0.99
72656270--72656328
21
2.8
20
75
17
57
44
0
0
55
0.99
72656424--72656487
18
3.1
21
80
17
80
42
0
0
57
0.98
72656424--72656504
40
2.0
40
83
11
103
46
0
0
53
1.00
72663960--72664000
20
2.1
20
86
13
59
46
12
0
41
1.41
72666282--72666681
80
5.0
80
99
0
782
31
18
11
39
1.86
72667215--72667249
14
2.6
14
90
4
54
60
2
11
25
1.45
72667320--72667556
73
3.2
73
83
8
291
33
19
16
30
1.94
72677994--72678045
8
6.5
8
78
8
52
61
1
3
32
1.25
72678156--72678215
23
2.9
20
70
15
59
56
5
6
31
1.47
72678171--72678318
48
3.0
48
77
11
129
56
4
6
32
1.44
72678247--72678313
29
2.3
29
84
5
82
56
2
5
34
1.39
72678274--72678330
25
2.3
26
74
14
59
56
0
5
38
1.22
72678360--72678405
25
1.9
25
86
8
69
60
0
4
34
1.16
72678680--72678718
16
2.4
16
86
0
51
43
28
5
23
1.75
72678846--72678944
30
3.3
30
91
0
162
17
5
48
29
1.68
72679220--72679282
7
9.4
7
78
16
62
50
0
1
47
1.10
72680455--72680522
22
3.0
22
85
6
93
16
22
19
42
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72681133--72681158
9
2.9
9
100
0
52
92
7
0
0
0.39
72683162--72683205
22
2.0
23
86
4
63
84
2
11
2
0.81
72694825--72694891
32
2.1
33
86
5
93
44
2
2
49
1.32
72694821--72694895
32
2.4
30
77
12
80
45
4
2
48
1.35
72697346--72697370
6
4.2
6
100
0
50
48
0
0
52
1.00
72698450--72698495
23
2.0
24
86
4
67
28
30
17
23
1.97
72699478--72699520
19
2.2
21
84
12
56
41
11
11
34
1.78
72701639--72701696
27
2.0
27
83
9
71
44
1
6
46
1.40
72707813--72707852
17
2.4
17
87
8
55
55
0
2
42
1.13
72714917--72714949
9
3.8
9
88
8
50
66
0
0
33
0.92
72714914--72714953
22
1.9
19
85
14
53
65
0
0
35
0.93
72715060--72715096
16
2.3
16
86
13
58
59
0
0
40
0.97
72729716--72729764
25
2.0
25
84
4
64
63
8
0
28
1.23
72729728--72729792
25
2.9
23
80
15
66
66
7
0
26
1.19
72729754--72729792
19
2.0
20
90
5
62
71
7
0
20
1.10
72738896--72738987
42
2.2
42
88
0
139
33
39
6
20
1.79
72743440--72743494
23
2.3
23
87
3
74
43
5
3
47
1.44
72743452--72743501
23
2.2
23
92
0
82
40
4
6
50
1.46
72745805--72745835
16
1.9
16
93
0
53
87
0
9
3
0.66
72746409--72746467
28
2.1
28
96
0
109
47
15
8
28
1.74
72747096--72747165
31
2.3
31
82
0
86
28
25
20
25
1.99
72747122--72747211
46
2.0
46
88
0
135
28
23
21
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72747226--72747380
50
3.1
50
94
0
265
28
22
13
35
1.92
72751167--72751205
2
19.5
2
100
0
78
51
0
48
0
1.00
72753633--72753812
92
2.0
92
87
2
263
37
15
17
30
1.90
72753718--72754020
155
1.9
155
83
4
387
37
17
15
29
1.90
72754059--72754245
94
2.0
94
87
4
270
37
16
16
29
1.90
72756786--72756825
8
4.8
8
88
11
62
85
0
12
2
0.71
72756786--72756825
18
2.4
16
88
12
62
85
0
12
2
0.71
72756786--72756825
9
4.6
9
81
6
55
85
0
12
2
0.71
72757997--72758034
19
2.0
19
94
0
67
31
23
10
34
1.89
72759665--72759718
27
2.0
27
100
0
108
55
3
7
33
1.45
72763958--72764005
25
1.9
25
82
0
60
35
16
10
37
1.83
72772448--72772512
32
2.0
32
87
3
94
40
13
9
36
1.77
72775179--72775577
3
136.0
3
70
10
182
29
7
1
61
1.33
72775522--72775573
17
3.1
16
75
10
50
23
3
1
71
1.13
72775553--72775590
18
2.1
18
85
9
51
21
2
0
76
0.91
72775554--72775620
8
8.5
8
74
11
50
19
4
2
73
1.14
72775554--72775620
12
5.3
12
77
13
55
19
4
2
73
1.14
72786137--72786229
30
3.1
29
78
15
100
32
0
1
66
0.99
72786141--72786230
28
3.1
28
78
15
92
32
0
1
66
0.99
72786963--72787027
32
2.0
32
87
3
94
40
13
9
36
1.77
72789694--72790096
3
138.0
3
71
9
183
29
7
1
61
1.33
72790041--72790092
17
3.1
16
75
10
50
23
3
1
71
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72790072--72790109
18
2.1
18
85
9
51
21
2
0
76
0.91
72790073--72790139
8
8.5
8
74
11
50
19
4
2
73
1.14
72790073--72790139
12
5.3
12
77
13
55
19
4
2
73
1.14
72795781--72795886
48
2.2
48
93
0
176
33
5
27
33
1.80
72799608--72799711
55
1.9
55
86
4
147
44
20
23
12
1.85
72800464--72800672
44
4.8
43
71
8
163
30
20
22
26
1.98
72800687--72800831
44
3.3
44
88
1
202
25
26
24
23
2.00
72801279--72801424
44
3.3
42
76
11
125
31
20
22
25
1.98
72802977--72803011
18
1.9
18
88
0
52
22
14
5
57
1.59
72813758--72813906
3
50.0
3
75
2
95
29
7
0
62
1.27
72813831--72813908
40
2.0
40
84
5
104
29
5
2
62
1.30
72813932--72813975
12
3.6
12
84
6
52
18
6
2
72
1.17
72813941--72813980
12
3.2
12
82
6
53
17
5
5
72
1.21
72814720--72814792
36
2.0
36
91
0
119
42
19
16
21
1.89
72814891--72814924
15
2.2
16
89
5
52
32
2
0
64
1.08
72816609--72816637
11
2.7
11
94
5
51
44
0
0
55
0.99
72822475--72822512
18
2.2
18
86
9
53
44
2
5
47
1.39
72823685--72823739
19
2.9
19
88
0
92
38
9
14
38
1.78
72824887--72824957
35
2.0
35
97
0
133
50
22
8
18
1.73
72834146--72834186
21
1.9
22
90
5
66
29
14
7
48
1.71
72836142--72836207
33
2.0
34
85
8
91
37
10
7
43
1.68
72838049--72838095
2
23.5
2
95
0
85
48
0
51
0
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72840555--72840704
21
7.1
21
69
6
106
16
22
16
44
1.87
72840554--72840731
42
4.2
42
88
0
248
16
22
16
44
1.86
72845788--72845821
15
2.2
16
94
5
61
35
0
0
64
0.94
72845886--72845929
16
2.9
15
80
12
54
50
0
2
47
1.13
72845981--72846043
32
2.0
32
100
0
126
25
6
9
58
1.53
72846758--72846812
3
18.3
3
96
0
74
34
7
0
58
1.26
72846873--72846930
6
9.7
6
98
0
107
67
13
17
1
1.32
72847322--72847383
22
2.8
22
82
4
63
40
16
27
16
1.89
72848273--72848303
3
10.3
3
100
0
62
32
0
0
67
0.91
72854025--72854080
20
2.8
19
83
5
67
71
3
1
23
1.11

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311