Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A12
Parameters: 2 7 7 80 10 50 1000
Length:  102106374

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   

This is table  97  of  311  ( 37258 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32130640--32130677
19
2.0
20
89
5
60
21
7
0
71
1.11
32137542--32137670
65
2.0
65
90
0
204
35
25
16
22
1.94
32138779--32138880
42
2.4
43
81
6
118
32
24
15
27
1.96
32140161--32140262
44
2.4
43
81
12
113
36
23
18
21
1.95
32140182--32140266
44
1.9
45
85
7
120
34
24
20
21
1.97
32144507--32144634
45
2.8
48
77
17
155
21
19
28
30
1.98
32147555--32147632
15
5.4
15
77
13
83
10
17
12
58
1.61
32147546--32147628
28
2.9
28
82
10
96
10
16
15
56
1.66
32150010--32150182
47
3.7
47
80
13
189
21
21
28
28
1.99
32150010--32150179
92
1.8
93
93
1
297
21
21
28
28
1.99
32155368--32155539
40
4.3
40
85
0
211
23
21
28
26
1.99
32164458--32164504
20
2.3
20
81
0
58
23
12
34
29
1.92
32170341--32170472
27
4.9
27
88
0
167
40
18
14
26
1.89
32170591--32170631
18
2.3
19
79
12
50
21
41
21
14
1.89
32175294--32175339
20
2.3
20
84
0
56
23
19
17
39
1.92
32175286--32175359
30
2.5
30
84
8
80
22
20
18
37
1.94
32177728--32177784
29
2.0
29
92
0
96
24
0
29
45
1.53
32181440--32181518
26
3.0
27
86
3
115
37
22
8
30
1.85
32181529--32181580
27
1.9
27
84
0
68
26
19
26
26
1.99
32181576--32181640
26
2.5
26
80
2
69
32
15
20
32
1.93
32183603--32183736
54
2.5
53
84
7
162
45
14
7
32
1.73
32206660--32206696
13
2.7
14
91
4
58
75
2
18
2
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32210543--32210599
29
2.0
29
92
0
96
45
29
0
24
1.53
32223524--32223637
27
4.2
26
84
9
149
36
24
21
16
1.94
32223524--32223637
54
2.1
54
95
0
201
36
24
21
16
1.94
32225260--32225315
26
2.2
26
100
0
112
35
26
7
30
1.83
32226700--32226748
20
2.3
20
82
10
53
32
8
14
44
1.74
32227393--32227449
29
2.0
29
92
0
96
24
0
29
45
1.53
32228427--32228471
14
3.3
14
78
6
56
48
15
0
35
1.45
32229102--32229141
19
2.2
19
86
8
57
75
5
7
12
1.18
32230054--32230110
11
5.5
10
73
22
55
77
1
17
3
1.00
32230054--32230110
5
11.0
5
77
17
55
77
1
17
3
1.00
32230054--32230110
16
3.7
14
80
17
60
77
1
17
3
1.00
32230179--32230203
12
2.1
12
100
0
50
76
0
16
8
1.02
32230173--32230228
18
3.1
18
76
5
51
69
3
19
7
1.27
32230179--32230260
30
2.7
31
79
5
96
63
1
21
13
1.36
32232494--32232590
30
3.2
31
73
5
101
27
28
15
27
1.96
32242398--32242449
23
2.3
22
75
21
54
11
21
1
65
1.34
32248597--32248644
14
3.4
14
85
0
60
18
31
6
43
1.75
32249036--32249071
16
2.4
15
90
9
56
77
11
0
11
0.99
32249034--32249073
14
2.5
17
76
23
50
80
10
0
10
0.92
32258681--32258725
20
2.2
21
84
11
58
26
28
13
31
1.94
32258742--32258838
30
3.2
30
77
2
106
28
26
15
28
1.96
32266990--32267023
14
2.4
14
100
0
68
11
0
5
82
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32268798--32268833
18
2.1
18
89
5
56
44
19
19
16
1.87
32269086--32269137
27
2.0
26
88
3
77
34
23
15
26
1.94
32278320--32278367
15
3.3
15
73
5
53
29
0
27
43
1.55
32278314--32278357
14
3.1
14
74
6
52
27
0
34
38
1.57
32278314--32278373
29
2.1
29
93
0
102
28
0
30
41
1.56
32279348--32279392
14
3.3
14
78
6
56
48
15
0
35
1.45
32282891--32282935
12
3.7
12
87
3
63
13
4
4
77
1.07
32282876--32282919
19
2.3
19
80
7
54
20
4
6
68
1.31
32284123--32284167
14
3.3
14
78
6
56
48
15
0
35
1.45
32288112--32288136
13
1.9
13
100
0
50
64
8
0
28
1.22
32290572--32290612
17
2.3
19
84
16
52
2
19
4
73
1.13
32292903--32292951
10
4.8
10
80
14
55
40
22
22
14
1.90
32292903--32292951
21
2.4
21
89
3
73
40
22
22
14
1.90
32295789--32296007
47
4.7
48
76
12
197
25
29
16
29
1.97
32295795--32296007
94
2.3
93
86
4
277
25
29
16
29
1.97
32304937--32304967
14
2.2
14
100
0
62
12
29
0
58
1.35
32308120--32308216
30
3.2
30
72
2
97
26
27
16
28
1.97
32309919--32309962
11
4.0
11
81
0
52
81
2
2
13
0.88
32309920--32309966
22
2.1
22
92
4
76
78
4
4
12
1.04
32310866--32310936
37
1.9
37
86
11
101
76
2
18
2
1.04
32310876--32310925
6
8.2
6
83
14
50
76
2
20
2
0.99
32313148--32313244
30
3.2
30
75
2
106
27
26
16
28
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32315012--32315067
24
2.3
24
84
6
69
3
26
3
66
1.25
32316273--32316297
10
2.5
10
100
0
50
16
8
0
76
1.02
32317804--32317849
20
2.2
21
88
3
67
15
19
21
43
1.87
32317811--32317858
21
2.3
20
92
3
78
12
16
22
47
1.80
32319030--32319069
19
2.1
19
85
4
53
17
30
7
45
1.76
32319820--32319872
27
2.0
26
85
3
70
52
15
11
20
1.72
32323991--32324018
13
2.2
13
100
0
56
78
7
0
14
0.95
32327638--32327691
12
4.6
12
84
8
67
77
5
3
12
1.07
32327735--32327806
28
2.5
28
82
17
85
73
2
13
9
1.19
32328694--32328732
15
2.4
15
87
12
51
66
2
20
10
1.33
32340591--32340630
19
2.1
19
85
0
53
25
35
17
22
1.95
32341883--32341926
14
3.1
14
83
0
52
15
40
2
40
1.60
32343439--32343496
10
5.7
10
76
11
64
29
27
13
29
1.94
32343439--32343499
20
3.0
20
83
9
79
27
26
13
32
1.93
32345048--32345095
14
3.4
14
80
8
53
75
2
18
4
1.07
32345055--32345103
15
3.2
16
80
11
59
73
2
18
6
1.14
32345617--32345689
13
5.5
13
76
16
62
72
5
5
16
1.22
32345692--32345735
16
2.8
16
78
0
52
75
4
18
2
1.09
32346238--32346295
10
5.7
10
76
11
64
29
27
13
29
1.94
32346238--32346298
20
3.0
20
83
9
79
27
26
13
32
1.93
32347651--32347676
12
2.2
12
100
0
52
76
7
0
15
0.99
32348755--32348785
12
2.7
12
95
5
55
83
6
9
0
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32348759--32348814
18
3.1
18
78
0
67
76
7
10
5
1.14
32348847--32348881
18
1.9
18
88
11
54
57
0
20
22
1.41
32350943--32351000
10
5.7
10
76
11
64
29
27
13
29
1.94
32350943--32351003
20
3.0
20
83
9
79
27
26
13
32
1.93
32352551--32352598
14
3.4
14
80
8
53
75
2
18
4
1.07
32352558--32352606
15
3.2
16
80
11
59
73
2
18
6
1.14
32354671--32354798
66
1.9
66
87
0
184
32
17
30
19
1.95
32359918--32359965
14
3.4
14
85
0
60
43
6
31
18
1.75
32364642--32364670
13
2.2
13
100
0
58
27
0
10
62
1.28
32366226--32366252
14
1.9
14
100
0
54
18
0
37
44
1.50
32366733--32366779
17
2.6
17
86
6
58
68
2
25
4
1.19
32366826--32366866
19
2.1
20
95
4
75
70
4
24
0
1.06
32369174--32369218
21
2.1
22
83
4
56
35
0
8
55
1.31
32369238--32369266
13
2.2
13
100
0
58
27
0
10
62
1.28
32374088--32374127
18
2.2
19
91
8
66
5
27
0
67
1.11
32377218--32377268
22
2.3
22
78
18
61
9
21
1
66
1.31
32382511--32382564
25
2.2
25
96
0
99
46
5
5
42
1.50
32382589--32382634
20
2.3
20
92
0
74
34
17
26
21
1.95
32382589--32382635
10
4.7
10
83
0
58
34
17
27
21
1.95
32384754--32384796
15
2.9
15
86
3
61
4
20
2
72
1.14
32386947--32386986
19
2.1
19
85
0
53
25
35
17
22
1.95
32393161--32393201
17
2.4
18
80
8
50
14
24
4
56
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32395434--32395486
23
2.4
22
87
6
72
16
7
3
71
1.24
32395438--32395478
11
3.6
11
83
6
55
14
7
2
75
1.12
32395434--32395478
12
3.8
12
85
5
65
17
8
2
71
1.23
32397771--32397853
42
1.9
42
83
9
105
60
6
26
7
1.47
32401928--32402111
40
4.6
40
82
6
196
23
20
27
28
1.99
32401928--32402108
80
2.3
81
83
9
221
23
20
27
27
1.99
32402009--32402158
40
3.8
38
80
8
122
24
22
28
24
1.99
32406359--32406415
29
2.0
29
92
0
96
24
0
29
45
1.53
32418877--32418933
29
2.0
29
92
0
96
45
29
0
24
1.53
32419150--32419177
10
2.8
10
100
0
56
82
0
7
10
0.85

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311