Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A05
Parameters: 2 7 7 80 10 50 1000
Length:  102776486

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   

This is table  101  of  325  ( 38985 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32646001--32646266
94
2.8
94
75
5
241
33
16
20
29
1.95
32647206--32647313
26
4.2
26
86
2
146
34
6
22
37
1.80
32647206--32647313
52
2.1
52
89
0
162
34
6
22
37
1.80
32655483--32655590
26
4.2
26
89
2
146
34
6
21
37
1.79
32655483--32655590
52
2.1
52
89
0
162
34
6
21
37
1.79
32657079--32657131
26
2.0
26
82
7
63
39
20
15
24
1.91
32657898--32657958
30
2.0
30
100
0
122
39
16
9
34
1.82
32659660--32659700
21
2.0
21
90
0
64
29
17
26
26
1.97
32660158--32660230
12
6.1
12
73
12
60
20
8
13
57
1.62
32660170--32660317
6
23.7
6
74
10
64
20
8
16
53
1.70
32660158--32660230
18
4.1
18
80
7
85
20
8
13
57
1.62
32660779--32660851
37
2.0
37
100
0
146
31
2
32
32
1.72
32662538--32662598
30
2.1
28
87
6
86
22
6
14
55
1.62
32663968--32663998
16
1.9
16
100
0
62
38
19
16
25
1.92
32663976--32664059
36
2.3
38
87
4
118
45
22
10
21
1.82
32664004--32664080
36
2.1
36
85
4
102
48
24
9
18
1.77
32664422--32664472
3
17.3
3
79
4
50
1
37
0
60
1.08
32664426--32664464
20
1.9
21
94
5
71
2
43
0
53
1.14
32675672--32676085
217
1.9
216
83
3
528
36
20
18
25
1.94
32689758--32689804
17
2.8
17
84
9
53
31
0
2
65
1.04
32689851--32689883
9
3.5
10
88
12
52
21
6
9
63
1.45
32695186--32695271
33
2.6
31
79
17
84
45
3
2
48
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32696953--32697005
26
2.0
27
85
7
74
24
15
22
37
1.92
32698445--32698553
26
4.2
26
96
1
184
36
23
5
33
1.78
32699227--32699255
15
2.0
15
93
6
51
68
0
0
31
0.89
32699644--32699668
12
2.1
12
100
0
50
76
0
0
24
0.80
32705504--32705559
26
2.2
26
100
0
112
35
26
7
30
1.83
32706452--32706533
42
2.0
42
90
0
128
23
19
6
51
1.69
32707134--32707158
11
2.3
11
100
0
50
28
28
0
44
1.55
32717247--32717544
44
6.6
44
72
11
194
30
17
23
28
1.97
32717786--32717952
44
3.8
44
74
7
140
29
17
23
29
1.97
32717788--32717962
88
2.0
88
79
4
192
30
18
22
28
1.97
32719920--32719963
21
2.2
20
83
4
52
27
4
2
65
1.23
32721056--32721132
36
2.2
35
83
6
93
68
6
16
7
1.35
32724910--32724937
5
5.6
5
100
0
56
17
0
0
82
0.68
32731010--32731101
39
2.4
39
92
0
148
22
20
30
26
1.98
32741866--32741964
39
2.5
39
91
0
153
22
22
30
25
1.99
32748882--32748929
22
2.2
22
85
3
62
66
20
2
10
1.32
32750485--32750749
26
10.4
25
65
14
87
29
8
4
57
1.49
32750661--32750748
24
3.6
23
74
9
77
28
6
5
59
1.46
32750637--32750770
48
2.8
48
82
7
139
26
8
5
58
1.50
32756960--32756984
12
2.1
12
100
0
50
48
8
0
44
1.32
32764303--32764367
30
2.2
30
88
5
96
29
24
3
43
1.69
32766388--32766430
21
2.0
21
90
0
68
37
46
13
2
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32766562--32766617
25
2.3
23
77
19
60
44
1
3
50
1.29
32766999--32767042
10
4.4
10
88
0
70
22
11
0
65
1.24
32770805--32770852
25
1.9
25
91
0
78
41
20
8
29
1.81
32774165--32774198
17
2.0
17
88
0
50
70
5
8
14
1.31
32774392--32774484
48
2.0
47
93
2
159
51
7
8
32
1.60
32789371--32789401
16
1.9
16
93
0
53
64
3
12
19
1.41
32789873--32789913
19
2.1
20
86
4
57
56
2
9
31
1.45
32790906--32790944
19
2.1
19
85
9
53
20
48
20
10
1.78
32810015--32810061
18
2.6
18
86
0
67
19
36
25
19
1.95
32816646--32816778
61
2.2
61
97
0
248
51
3
6
37
1.46
32820102--32820206
45
2.3
45
88
0
147
23
26
15
34
1.94
32820220--32820513
78
3.8
78
85
2
412
26
24
18
30
1.97
32820220--32820513
155
1.9
156
88
2
448
26
24
18
30
1.97
32820595--32820800
78
2.6
78
92
0
340
24
24
19
31
1.98
32820308--32821008
286
2.4
287
93
0
1208
25
23
18
31
1.97
32820681--32821099
208
2.0
209
94
0
741
25
23
18
31
1.97
32820102--32821008
364
2.5
357
78
9
925
26
24
18
31
1.97
32836536--32836564
13
2.1
14
93
6
51
58
0
0
41
0.98
32844699--32844907
104
2.0
104
98
0
400
26
22
22
27
1.99
32847209--32847243
18
2.0
17
88
5
52
11
11
0
77
1.00
32865091--32865416
44
7.6
43
72
8
209
30
20
22
26
1.98
32865048--32865383
90
3.9
88
74
11
316
30
21
21
26
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32865267--32865428
87
1.9
87
84
2
218
29
20
24
25
1.99
32870329--32870357
14
2.0
15
93
6
51
48
6
13
31
1.69
32873915--32873965
23
2.2
23
83
13
61
68
5
3
21
1.27
32874001--32874043
11
3.8
11
82
11
52
69
2
2
25
1.12
32877155--32877194
12
3.3
12
86
6
55
52
10
0
37
1.35
32878916--32878982
27
2.4
27
95
5
116
44
2
38
13
1.59
32882547--32882597
21
2.4
21
93
0
84
25
1
31
41
1.67
32884595--32884626
10
3.3
10
95
4
57
62
0
6
31
1.20
32884622--32884684
27
2.3
26
76
10
63
50
11
0
38
1.38
32884651--32884680
15
2.0
15
93
0
51
40
10
0
50
1.36
32888001--32888104
42
2.5
42
82
0
118
42
19
25
13
1.87
32888015--32888078
21
3.0
21
74
0
65
40
20
26
12
1.88
32888228--32888268
19
2.2
19
95
0
73
31
12
7
48
1.68
32892751--32892792
22
1.9
22
85
0
57
2
14
2
80
0.90
32902332--32902391
3
21.0
3
76
10
63
65
0
35
0
0.93
32902979--32903480
150
3.4
150
87
4
735
58
5
7
28
1.49
32903419--32903478
15
4.2
14
74
17
61
71
3
1
23
1.10
32903419--32903480
13
4.5
13
72
21
54
70
3
1
24
1.10
32904565--32904627
17
3.7
17
78
4
65
31
1
0
66
1.01
32904570--32904611
6
7.2
6
83
5
50
28
0
0
71
0.86
32904628--32904708
40
2.0
40
82
0
99
24
2
8
64
1.35
32906579--32906617
17
2.3
17
91
8
62
46
10
10
33
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32909817--32909852
15
2.3
16
90
9
65
16
19
16
47
1.83
32910896--32910932
11
3.4
11
88
0
56
0
18
0
81
0.70
32912446--32912526
38
2.1
38
82
8
94
28
16
4
50
1.65
32912830--32912864
17
1.9
17
88
11
52
34
0
0
65
0.93
32912830--32912869
19
2.0
19
85
9
53
37
0
0
62
0.95
32925845--32925913
32
2.2
32
81
5
77
43
2
5
47
1.42
32929452--32929500
23
2.1
24
84
3
64
53
8
8
30
1.60
32930686--32930786
49
2.1
49
100
0
202
52
11
22
12
1.72
32934162--32934217
26
2.1
28
86
6
80
57
0
1
41
1.09
32934176--32934219
13
3.4
13
80
0
52
54
0
2
43
1.12
32935388--32935428
20
2.2
19
83
16
50
41
0
2
56
1.13
32943550--32943815
9
28.1
9
67
19
87
63
3
3
30
1.27
32943546--32943579
10
3.3
10
88
8
50
64
0
0
35
0.94
32943551--32943576
11
2.4
11
100
0
52
76
0
0
23
0.78
32943550--32943706
76
2.1
75
81
8
176
63
3
3
29
1.28
32943616--32943812
19
10.4
19
65
17
65
64
3
4
27
1.28
32943704--32943788
28
3.1
27
75
12
93
65
2
4
27
1.24
32943690--32943815
37
3.3
37
79
11
114
63
3
3
29
1.28
32943706--32943799
26
3.5
25
71
22
66
63
3
4
28
1.28
32943948--32944000
26
2.1
25
86
6
72
35
1
5
56
1.34
32944087--32944255
85
2.0
85
82
2
205
30
10
20
38
1.86
32948204--32948242
16
2.4
16
95
0
69
28
25
7
38
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32948873--32948922
23
2.1
24
85
3
66
58
2
2
38
1.21
32950214--32950255
3
14.0
3
100
0
84
66
0
0
33
0.92
32954302--32954365
18
3.6
17
75
19
60
68
1
1
28
1.07
32954341--32954411
20
3.6
19
70
12
63
64
1
1
32
1.11
32961113--32961180
34
2.0
35
88
8
104
63
2
1
32
1.18
32969146--32969179
16
2.1
17
88
5
52
38
8
14
38
1.78
32971540--32971610
23
3.0
23
73
15
65
52
12
5
29
1.62
32972183--32972227
19
2.4
19
96
3
83
35
0
11
53
1.37
32972822--32972883
32
1.9
32
96
0
115
29
9
22
38
1.86
32977873--32977909
15
2.5
15
87
12
51
62
8
0
29
1.24

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325