Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A05
Parameters: 2 7 7 80 10 50 1000
Length:  102776486

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   

This is table  118  of  325  ( 38985 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36976106--36976140
18
1.9
18
94
0
61
31
25
14
28
1.95
36978196--36978230
18
1.9
18
94
0
61
28
14
25
31
1.95
36985230--36985264
18
1.9
18
94
0
61
28
14
25
31
1.95
36985642--36985710
30
2.3
30
87
0
111
26
49
5
18
1.70
36986254--36986405
25
6.0
26
73
13
102
34
6
4
54
1.47
36986283--36986357
27
2.7
29
71
23
72
34
5
4
56
1.41
36986333--36986374
22
1.9
22
90
0
66
28
2
7
61
1.35
36986339--36986401
26
2.4
25
84
5
72
30
4
6
58
1.43
36986383--36986441
23
2.8
20
72
16
57
32
6
5
55
1.48
36986556--36986590
16
2.3
15
90
5
52
31
2
2
62
1.24
36993669--36993824
73
2.1
74
90
1
242
29
16
21
32
1.95
36993815--36993859
14
3.3
14
87
6
74
13
8
6
71
1.31
36993815--36993859
13
3.4
13
90
3
72
13
8
6
71
1.31
36993746--36994038
100
2.9
101
88
3
423
24
17
18
39
1.91
36993753--36994124
100
3.8
99
84
7
401
26
16
18
37
1.92
36994049--36994417
73
5.0
73
86
5
494
30
17
20
32
1.95
36994048--36994395
147
2.4
148
92
1
585
31
16
20
31
1.95
36994386--36994900
87
5.8
91
80
9
440
28
16
18
37
1.92
36994324--36994826
87
5.7
87
82
9
461
29
16
17
35
1.93
36994432--36994863
178
2.4
176
79
10
457
29
16
18
36
1.93
36995543--36995671
30
4.3
30
90
0
195
25
47
6
20
1.74
36996218--36996365
25
6.0
25
75
10
117
33
6
4
55
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36996270--36996360
24
3.9
23
76
16
80
30
5
5
58
1.44
36996515--36996549
16
2.3
15
90
5
52
31
2
2
62
1.24
37002298--37002331
16
2.1
17
88
5
52
41
5
23
29
1.78
37003971--37004005
18
1.9
18
94
0
61
28
14
25
31
1.95
37004181--37004216
18
1.9
19
88
5
56
38
0
16
44
1.48
37006066--37006096
10
3.1
10
90
0
53
38
0
9
51
1.35
37006810--37006849
19
2.1
19
86
9
55
40
0
0
60
0.97
37007364--37007643
130
2.2
127
82
8
336
34
19
17
28
1.95
37007411--37007643
130
1.8
127
87
5
344
35
17
17
29
1.93
37012459--37012496
17
2.3
17
86
4
51
23
0
0
76
0.79
37012429--37012486
29
1.9
31
83
13
77
25
1
5
67
1.21
37014201--37014229
10
3.0
10
95
5
51
51
0
10
37
1.36
37018006--37018052
24
2.0
24
100
0
94
34
4
31
29
1.77
37022026--37022065
19
2.2
18
86
8
55
47
0
5
47
1.24
37022498--37022527
11
2.7
11
94
0
51
30
0
6
63
1.20
37025996--37026037
21
2.0
21
95
0
75
38
21
16
23
1.93
37026371--37026464
47
2.0
47
95
0
170
36
19
12
31
1.89
37029474--37029706
84
2.8
79
78
7
205
45
9
11
32
1.73
37034366--37034395
14
2.1
14
93
0
51
50
6
3
40
1.45
37034379--37034421
19
2.3
19
84
8
52
41
2
0
55
1.12
37034916--37034961
13
3.4
14
85
8
60
52
0
0
47
1.00
37034920--37034959
14
2.8
16
78
21
52
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37034964--37035023
22
2.8
22
85
5
70
51
0
0
48
1.00
37035107--37035138
16
2.0
16
93
0
55
53
6
0
40
1.26
37035758--37035792
18
1.9
18
88
0
52
34
14
14
37
1.86
37036259--37036296
14
2.6
15
83
8
51
55
0
5
39
1.23
37037918--37038055
66
2.1
66
80
0
159
31
21
12
35
1.90
37038674--37038742
35
2.0
35
97
0
129
17
49
11
21
1.78
37038691--37038770
34
2.3
35
84
2
99
22
51
10
16
1.74
37039162--37039199
20
1.9
20
88
0
58
81
5
2
10
0.94
37039758--37040058
125
2.4
120
74
15
268
30
5
5
57
1.47
37052444--37052670
122
1.9
122
84
3
305
30
14
21
34
1.92
37052377--37053057
190
3.5
191
94
2
1161
29
14
21
34
1.93
37052635--37052859
121
1.9
121
81
1
281
31
14
21
33
1.93
37052756--37052883
68
1.9
68
90
0
202
34
15
21
28
1.94
37052946--37053480
74
6.9
74
77
10
482
28
17
20
33
1.96
37052933--37053757
233
3.5
231
77
12
828
29
17
19
33
1.95
37053022--37053852
392
2.1
383
80
10
914
29
16
19
34
1.94
37053505--37053757
73
3.5
72
89
5
375
32
18
18
30
1.95
37054462--37054530
35
2.0
35
100
0
138
17
50
11
20
1.76
37054479--37054558
34
2.3
35
84
2
99
22
51
10
16
1.74
37055619--37055661
3
14.3
3
100
0
86
32
0
0
67
0.91
37061029--37061073
20
2.2
20
88
4
63
42
2
2
53
1.25
37064779--37064830
21
2.4
22
90
6
79
34
26
25
13
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37064756--37064842
21
4.0
23
76
10
74
37
25
21
14
1.92
37065333--37065449
51
2.3
51
80
4
121
25
23
10
41
1.86
37066647--37066685
19
2.0
20
85
5
53
23
28
23
25
1.99
37066708--37066744
18
2.1
18
85
14
51
24
21
5
48
1.71
37068064--37068106
22
2.0
22
85
0
59
72
2
4
20
1.14
37068903--37068938
14
2.5
15
95
4
65
52
13
30
2
1.55
37070857--37070917
29
2.1
29
84
0
77
18
31
13
37
1.88
37077180--37077255
35
2.2
34
79
6
82
27
11
14
46
1.80
37077885--37077918
14
2.4
14
90
0
50
64
5
5
23
1.38
37079143--37079182
18
2.2
19
86
13
57
77
15
0
7
0.98
37080633--37080671
21
1.9
20
89
5
60
25
2
10
61
1.41
37082774--37083036
31
8.5
31
88
2
377
29
18
25
26
1.98
37083042--37083070
7
4.1
7
100
0
58
44
13
27
13
1.82
37083074--37083199
47
2.7
48
85
2
157
30
15
25
29
1.95
37087560--37087592
13
2.4
14
90
5
50
27
0
0
72
0.85
37087628--37087685
21
2.7
22
89
7
93
41
0
0
58
0.98
37087908--37087965
20
2.9
19
82
7
80
62
0
0
37
0.96
37087927--37087951
13
1.9
13
100
0
50
64
0
0
36
0.94
37088007--37088038
14
2.3
14
100
0
64
59
0
0
40
0.97
37087986--37088045
23
2.6
23
82
15
70
56
0
0
43
0.99
37088005--37088080
33
2.2
35
82
17
97
59
2
0
38
1.12
37087995--37088075
11
7.2
11
73
22
62
58
1
0
40
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37088115--37088180
21
3.2
20
82
8
62
51
0
4
43
1.22
37088140--37088185
21
2.1
21
92
4
74
56
0
2
41
1.11
37088148--37088190
21
2.0
21
86
8
61
62
2
2
32
1.20
37088148--37088192
22
2.1
21
87
4
63
62
2
2
33
1.20
37088153--37088220
35
2.0
35
91
8
113
61
1
1
35
1.14
37089457--37089510
3
18.3
3
78
17
60
62
0
3
33
1.12
37089721--37089774
3
18.3
3
80
3
56
59
1
7
31
1.36
37090307--37090349
22
2.0
22
86
9
61
51
11
0
37
1.39
37091207--37091250
21
2.1
21
87
8
63
75
0
9
15
1.05
37092208--37092242
14
2.5
14
85
0
52
40
0
20
40
1.52
37096885--37096930
24
1.9
24
86
0
65
41
2
6
50
1.40
37104492--37104523
17
1.9
17
93
6
57
62
0
0
37
0.95
37108871--37108904
4
8.2
4
93
6
59
76
0
23
0
0.79
37112918--37112942
5
5.0
5
100
0
50
80
0
0
20
0.72
37113169--37113203
18
1.9
18
88
0
52
25
5
2
65
1.28
37129462--37129502
14
2.9
14
92
3
64
63
2
26
7
1.33
37144019--37144197
39
4.6
39
92
0
286
13
26
22
37
1.91
37145968--37146046
28
2.8
28
88
0
113
34
10
25
30
1.89
37150862--37150900
17
2.3
17
95
0
69
35
0
0
64
0.94
37152127--37152151
11
2.3
11
100
0
50
24
0
8
68
1.16
37152125--37152193
19
3.6
20
78
9
72
39
0
5
55
1.24
37160350--37160379
15
2.0
15
93
0
51
23
0
63
13
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37160804--37160841
20
1.9
20
94
0
67
57
5
0
36
1.21
37162235--37162301
9
7.1
9
77
15
64
38
1
0
59
1.06
37163665--37163738
24
3.3
23
69
21
66
52
1
4
41
1.28
37166828--37166897
3
23.0
3
82
2
68
28
4
4
62
1.33
37166812--37166863
19
2.8
19
79
2
61
30
13
0
55
1.38
37167050--37167080
3
10.3
3
92
0
53
32
3
0
64
1.09
37167290--37167390
34
2.8
36
75
11
100
27
7
2
61
1.39
37167290--37167332
3
14.0
3
80
4
50
30
2
2
65
1.18
37167495--37167532
16
2.3
17
90
4
60
28
10
0
60
1.30
37174643--37174680
17
2.2
17
100
0
76
63
10
5
21
1.46

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325