Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A05
Parameters: 2 7 7 80 10 50 1000
Length:  102776486

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   

This is table  324  of  325  ( 38985 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102045024--102045067
3
14.3
3
90
4
70
34
2
0
63
1.07
102045097--102045161
28
2.3
29
75
19
66
33
3
7
55
1.44
102045369--102045408
17
2.4
17
82
0
53
40
0
2
57
1.12
102048761--102048827
29
2.3
28
82
10
73
47
1
7
43
1.40
102049050--102049093
23
1.9
23
90
0
70
54
2
2
40
1.25
102051983--102052027
21
2.1
22
87
4
65
15
8
0
75
1.03
102052726--102052785
31
1.9
32
82
3
77
36
1
10
51
1.45
102052738--102052782
23
2.0
23
91
8
74
37
0
11
51
1.38
102052908--102052970
17
3.5
17
72
10
54
30
6
6
57
1.49
102052893--102052983
35
2.6
33
73
19
87
29
4
6
59
1.42
102053009--102053055
23
2.0
24
83
8
60
21
8
4
65
1.37
102053314--102053364
3
17.3
3
85
4
59
33
7
0
58
1.27
102058445--102058514
34
2.1
34
97
0
131
35
8
12
42
1.74
102060901--102061005
51
2.1
51
100
0
210
27
23
16
32
1.96
102065482--102065542
20
3.0
20
80
4
77
55
9
11
22
1.64
102069527--102069564
19
2.0
19
100
0
76
42
0
21
36
1.53
102073145--102073192
21
2.2
22
88
3
71
27
2
0
70
0.98
102078208--102078257
11
4.6
11
77
5
57
36
0
0
64
0.94
102078208--102078257
22
2.3
22
93
3
84
36
0
0
64
0.94
102078208--102078263
22
2.6
21
86
5
76
42
0
0
57
0.99
102078449--102078477
11
2.5
12
94
5
51
34
0
0
65
0.93
102078668--102078696
6
4.8
6
100
0
58
0
34
17
48
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102081590--102081634
19
2.4
19
81
3
56
40
0
17
42
1.50
102092099--102092354
39
6.6
39
95
0
458
27
26
21
23
1.99
102102289--102102327
17
2.3
17
90
0
60
43
0
0
56
0.99
102106153--102106177
13
1.9
13
100
0
50
52
0
16
32
1.44
102106347--102106420
23
3.3
22
94
3
121
17
21
28
32
1.96
102113443--102113480
17
2.2
17
86
9
51
31
0
21
47
1.51
102113511--102113535
13
1.9
13
100
0
50
52
0
16
32
1.44
102113705--102113777
23
3.2
23
94
3
130
19
21
26
32
1.97
102115545--102115573
12
2.4
12
100
0
58
27
17
24
31
1.97
102118483--102118540
30
1.9
31
82
3
73
17
13
12
56
1.66
102127065--102127115
23
2.2
23
79
6
59
33
13
21
31
1.92
102127255--102127307
10
5.1
11
82
13
51
52
5
0
41
1.25
102127270--102127308
12
3.4
12
89
10
64
53
5
0
41
1.23
102129803--102129849
20
2.4
20
86
10
62
31
2
4
61
1.27
102129820--102129857
20
1.9
20
88
0
58
31
5
7
55
1.51
102129803--102129866
21
3.2
19
82
12
60
31
4
4
59
1.38
102129928--102129975
21
2.5
18
78
15
51
27
0
4
68
1.07
102129943--102129990
23
2.1
23
92
7
80
29
0
4
66
1.10
102129968--102130043
19
4.3
19
71
18
65
39
1
1
57
1.15
102129997--102130051
8
6.6
8
75
21
51
41
0
0
58
0.98
102129996--102130046
15
3.2
15
76
15
57
45
0
0
54
0.99
102129975--102130044
33
2.1
33
86
7
97
41
1
1
55
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102132294--102132398
35
3.0
35
94
2
176
44
43
0
11
1.40
102132298--102132418
35
3.4
35
88
5
138
44
41
0
13
1.49
102133613--102133652
19
2.2
19
86
4
55
27
2
0
70
1.01
102133626--102133708
3
28.3
3
77
9
73
27
3
1
67
1.15
102134100--102134175
21
3.6
21
75
7
64
31
3
3
60
1.33
102134119--102134173
22
2.4
23
80
14
62
34
1
3
60
1.25
102134119--102134181
23
2.7
24
76
16
69
38
1
3
57
1.24
102139700--102139949
86
2.9
86
81
2
270
33
20
17
29
1.95
102141290--102141443
28
5.6
27
82
10
163
28
27
15
27
1.96
102148222--102148376
28
5.6
28
85
6
192
28
27
14
29
1.96
102151254--102151316
29
2.1
30
85
2
83
63
3
7
25
1.37
102158285--102158315
12
2.7
12
95
5
55
90
0
9
0
0.46
102158285--102158323
16
2.4
16
86
4
51
87
0
10
2
0.65
102160271--102160325
27
2.0
28
82
13
69
38
12
1
47
1.52
102161516--102162104
291
2.0
290
91
0
946
31
9
23
35
1.86
102167076--102167109
13
2.5
13
90
4
50
5
11
0
82
0.83
102168472--102168497
13
2.0
13
100
0
52
61
7
7
23
1.49
102168792--102168994
41
5.0
40
84
6
212
33
23
23
20
1.98
102168977--102169012
18
2.0
18
100
0
72
38
27
11
22
1.88
102168936--102169053
59
2.0
59
88
0
173
31
22
22
23
1.98
102169047--102169098
25
2.1
25
92
0
86
30
23
26
19
1.98
102169006--102169139
66
2.0
66
89
0
205
29
20
26
23
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102170506--102170546
21
2.0
21
85
0
55
24
0
29
46
1.53
102173910--102174046
9
14.6
9
72
8
103
45
20
2
32
1.63
102173910--102174044
57
2.4
57
84
0
171
45
20
2
31
1.64
102177400--102177520
47
2.6
47
88
1
172
26
16
25
31
1.96
102183669--102184111
43
10.3
42
73
8
254
20
20
27
31
1.98
102183862--102184110
85
2.9
83
80
8
227
21
22
26
29
1.99
102183948--102184130
85
2.2
85
80
9
205
21
21
25
31
1.98
102185402--102185479
34
2.3
34
82
12
99
56
5
1
37
1.30
102186918--102186950
17
1.9
18
88
11
52
0
18
15
66
1.25
102189783--102189831
20
2.6
18
78
12
53
34
2
4
59
1.28
102189920--102189967
12
3.8
12
81
15
53
35
2
0
62
1.07
102197548--102197613
32
2.1
32
94
0
114
51
9
15
24
1.72
102198516--102198681
82
2.0
82
83
0
206
47
10
9
32
1.70
102205255--102205325
27
2.7
24
72
18
52
59
2
0
38
1.12
102205931--102205971
21
2.0
21
85
9
57
58
0
2
39
1.11
102210755--102210803
21
2.3
21
78
0
62
38
4
14
42
1.64
102217490--102217523
12
3.1
11
91
8
52
38
0
0
61
0.96
102221024--102221053
2
15.0
2
100
0
60
50
0
0
50
1.00
102221655--102221696
22
1.9
22
85
0
57
11
11
9
66
1.44
102224123--102224198
33
2.3
34
90
4
127
34
10
5
50
1.59
102225194--102225250
20
2.7
22
76
13
66
63
0
1
35
1.05
102225194--102225258
22
3.1
21
73
18
64
60
0
1
38
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102225224--102225257
14
2.4
14
95
0
59
61
0
0
38
0.96
102227255--102227323
19
3.5
19
71
15
52
46
1
8
43
1.43
102229660--102229728
21
3.4
21
71
15
72
36
1
7
55
1.37
102230108--102230150
18
2.4
19
81
18
56
74
0
23
2
0.93
102234271--102234339
19
3.5
19
71
15
52
46
1
8
43
1.43
102236979--102237023
23
2.0
23
82
4
56
28
4
22
44
1.72
102246515--102246545
5
6.2
5
92
0
53
38
3
58
0
1.15
102247799--102248020
109
2.0
109
94
0
390
29
17
15
37
1.91
102250215--102250271
28
2.0
28
100
0
114
38
7
10
43
1.66
102257487--102257663
50
3.5
50
91
2
275
35
15
22
26
1.94
102257639--102257811
31
5.6
31
91
0
256
28
17
27
26
1.98
102257843--102258056
47
4.7
46
82
6
202
28
15
26
29
1.96
102257847--102258100
42
5.6
48
82
10
220
29
14
26
29
1.95
102259625--102259706
38
2.1
40
84
8
107
28
24
23
24
2.00
102260027--102260078
26
2.0
26
96
0
95
26
13
11
48
1.77
102265044--102265076
11
2.8
12
86
4
50
30
0
9
60
1.27
102265062--102265117
22
2.7
21
78
13
62
21
0
7
71
1.09
102267533--102267695
47
3.4
47
77
4
159
23
13
28
33
1.93
102267562--102267694
46
2.9
47
80
4
144
23
13
29
33
1.93
102270964--102271002
20
2.0
20
89
0
60
53
15
12
17
1.72
102280038--102280079
21
2.0
21
85
0
57
40
16
9
33
1.81
102286716--102287095
195
1.9
196
88
1
575
36
21
11
30
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102289328--102289361
11
3.1
11
86
0
50
64
0
0
35
0.94
102294197--102294289
39
2.5
37
80
7
98
27
29
22
20
1.98
102294645--102294692
3
16.0
3
82
0
60
58
6
0
35
1.23
102294646--102294694
18
2.7
18
93
0
80
55
8
0
36
1.30
102294645--102294692
12
4.0
12
91
0
69
58
6
0
35
1.23
102296001--102296060
23
2.5
23
78
8
57
50
3
0
46
1.18
102300947--102300989
21
2.0
21
82
8
52
23
20
4
51
1.66
102306136--102306180
23
2.0
23
81
0
54
48
0
4
46
1.22
102306236--102306296
30
2.0
30
81
9
70
59
6
34
0
1.24
102307502--102307550
18
2.7
18
93
0
80
36
0
8
55
1.30

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325