Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  104  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33621601--33621683
23
3.8
21
77
22
82
78
2
14
4
1.02
33622688--33622789
6
16.5
6
70
8
62
71
2
18
6
1.21
33622688--33622784
18
5.3
18
71
8
70
71
3
18
7
1.23
33622742--33622795
14
3.9
14
76
16
58
74
0
20
5
1.02
33622745--33622801
14
4.2
13
75
16
53
73
0
17
8
1.07
33622744--33622801
27
2.1
27
87
6
82
72
0
18
8
1.10
33622674--33622781
12
9.0
12
69
21
57
69
2
18
9
1.28
33622798--33622860
33
1.9
33
84
12
85
53
6
26
12
1.62
33625447--33625477
12
2.6
12
94
0
53
83
6
0
9
0.79
33625471--33625539
21
3.2
21
80
19
88
78
1
15
4
0.98
33626547--33626652
6
17.2
6
70
8
70
72
2
17
6
1.18
33626533--33626658
12
10.4
12
69
20
66
69
2
18
9
1.26
33626655--33626717
33
1.9
33
84
12
85
53
6
26
12
1.62
33635518--33635555
17
2.2
18
85
4
51
63
2
23
10
1.39
33635537--33635591
12
4.6
12
73
15
51
63
0
23
12
1.29
33641780--33641823
22
2.0
22
95
0
79
25
36
4
34
1.76
33642131--33642162
12
2.7
12
100
0
64
81
0
6
12
0.87
33644832--33644884
23
2.4
22
76
20
56
9
18
1
69
1.25
33646307--33646423
12
9.6
12
71
18
57
71
4
17
5
1.23
33646295--33646335
21
2.0
21
85
0
55
78
4
12
4
1.07
33646294--33646366
33
2.2
33
79
16
80
71
5
16
6
1.27
33646307--33646411
6
16.7
6
66
12
50
71
3
18
6
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33646372--33646409
13
2.8
13
82
17
51
73
0
18
7
1.06
33646373--33646423
21
2.4
21
74
6
50
74
1
17
5
1.11
33646426--33646488
33
1.9
33
84
12
85
53
6
26
12
1.62
33648263--33648316
20
2.7
20
82
0
63
24
20
18
37
1.94
33648263--33648336
30
2.5
30
86
8
98
21
20
18
39
1.93
33648263--33648327
20
3.2
20
71
16
53
23
21
16
38
1.93
33653550--33653578
13
2.2
13
100
0
58
27
0
10
62
1.28
33655540--33655636
30
3.2
30
72
8
99
28
16
26
27
1.97
33659587--33659683
30
3.2
31
73
5
101
27
28
15
27
1.96
33660763--33660790
4
7.0
4
100
0
56
75
0
0
25
0.81
33662408--33662453
10
4.5
10
81
5
56
15
23
21
39
1.92
33662405--33662453
21
2.4
20
89
3
71
14
22
22
40
1.90
33662675--33662703
13
2.2
13
100
0
58
27
0
10
62
1.28
33665079--33665228
67
2.2
67
81
8
171
32
17
28
21
1.96
33665103--33665285
67
2.8
64
76
9
185
30
17
29
22
1.97
33667890--33667935
16
3.1
14
82
14
56
76
4
17
2
1.06
33668015--33668091
30
2.6
30
81
8
77
61
0
25
12
1.32
33670836--33670961
39
3.2
39
87
0
180
30
26
21
22
1.99
33674193--33674225
12
2.6
13
85
9
50
63
0
24
12
1.28
33674204--33674256
22
2.4
22
77
22
58
66
1
22
9
1.31
33680266--33680305
19
2.1
19
86
9
55
27
35
12
25
1.92
33681524--33681586
21
3.0
21
88
2
90
30
3
33
33
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33682874--33682961
30
2.9
30
72
0
86
28
27
15
28
1.96
33686187--33686257
13
5.5
13
74
12
56
73
5
5
15
1.21
33686196--33686257
13
4.7
14
82
11
78
70
4
6
17
1.26
33687171--33687227
5
11.0
5
75
20
55
75
3
19
1
1.04
33687170--33687227
21
2.8
20
79
10
62
74
5
18
1
1.10
33690026--33690122
30
3.2
30
72
8
90
28
15
27
27
1.96
33691554--33691614
10
6.1
10
74
12
54
32
13
24
29
1.93
33691555--33691615
20
3.0
20
83
9
79
32
13
26
27
1.93
33693745--33693769
12
2.1
12
100
0
50
8
16
0
76
1.02
33693837--33693893
21
2.8
20
76
12
53
3
15
3
77
1.05
33693837--33693892
15
3.7
14
81
13
58
3
16
1
78
0.97
33696386--33696482
30
3.2
30
75
8
99
29
15
26
27
1.96
33699603--33699650
12
4.0
12
88
0
60
16
20
0
62
1.33
33699620--33699650
6
5.2
6
100
0
62
16
16
0
67
1.23
33699611--33699650
18
2.2
18
90
0
62
17
17
0
65
1.28
33699730--33699793
16
4.2
14
77
16
65
1
17
6
75
1.09
33700012--33700108
30
3.2
30
76
2
106
27
27
16
27
1.97
33703892--33703937
24
2.0
24
83
12
60
15
26
0
58
1.37
33703892--33703938
12
3.9
12
76
18
53
17
25
0
57
1.40
33703928--33703966
18
2.2
18
85
0
51
12
23
2
61
1.43
33708731--33708770
19
2.1
19
85
0
53
25
35
17
22
1.95
33711845--33711897
23
2.4
22
76
20
56
9
18
1
69
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33714765--33714812
14
3.4
14
85
0
60
18
31
6
43
1.75
33714973--33715243
135
2.0
135
97
0
515
42
18
17
21
1.89
33719917--33720000
27
3.1
27
82
0
105
34
22
13
29
1.92
33730691--33730725
13
2.7
13
95
0
61
62
5
0
31
1.18
33730939--33730993
21
2.7
21
83
5
69
34
18
27
20
1.95
33731508--33731574
32
2.1
32
81
10
75
11
19
25
43
1.85
33733738--33733781
22
2.0
22
95
0
79
25
36
4
34
1.76
33736362--33736404
20
2.2
20
86
0
59
53
2
30
13
1.53
33740219--33740262
22
2.0
22
95
0
79
25
36
4
34
1.76
33740747--33740781
16
2.2
16
89
0
52
34
8
14
42
1.76
33746118--33746214
30
3.2
30
77
2
106
28
15
26
28
1.96
33752901--33752963
33
1.9
33
84
12
85
12
26
6
53
1.62
33752961--33753016
21
2.7
21
72
5
51
8
17
1
71
1.21
33752960--33753016
14
4.1
14
75
16
57
8
17
1
71
1.19
33753025--33753081
17
3.3
17
76
13
62
5
15
7
71
1.25
33752978--33753115
18
7.7
18
69
13
79
7
20
2
68
1.28
33752978--33753084
6
17.7
6
69
7
65
6
18
3
71
1.24
33754080--33754119
20
2.0
21
90
5
64
2
15
5
77
1.04
33756448--33756612
42
3.8
43
73
12
140
33
25
13
26
1.94
33760969--33761031
23
2.7
22
73
23
58
11
22
1
65
1.33
33761014--33761049
16
2.2
17
90
5
56
11
25
0
63
1.27
33766878--33766928
12
3.8
12
79
20
57
68
0
7
23
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33769127--33769174
17
2.8
17
80
0
60
77
4
10
8
1.12
33776425--33776474
13
3.7
13
78
19
57
70
2
8
20
1.23
33778710--33778735
4
6.5
4
100
0
52
76
0
0
23
0.78
33780082--33780142
23
2.8
22
75
7
61
8
19
1
70
1.21
33782446--33782478
11
3.0
11
91
8
50
75
0
0
24
0.80
33784301--33784397
30
3.2
30
75
2
106
28
26
15
28
1.96
33792524--33792561
20
2.0
20
85
10
53
2
21
2
73
1.07
33793566--33793599
15
2.2
15
89
5
50
20
17
5
55
1.62
33793597--33793650
10
5.0
10
79
16
54
3
18
1
75
1.03
33793687--33793713
9
3.0
9
100
0
54
77
0
0
22
0.76
33799121--33799224
38
2.7
38
76
5
111
24
21
24
30
1.99
33799217--33799327
42
2.6
43
94
2
197
10
26
32
30
1.90
33799659--33799779
45
2.7
45
94
2
208
25
19
24
30
1.98
33800615--33800639
13
1.9
13
100
0
50
48
8
12
32
1.69
33804068--33804130
21
3.0
21
83
2
72
33
31
4
30
1.78
33804524--33804548
13
1.9
13
100
0
50
36
16
32
16
1.90
33805027--33805122
30
3.2
29
75
7
86
29
14
26
30
1.95
33807044--33807189
28
5.2
27
82
8
159
28
34
13
23
1.93
33807044--33807189
57
2.6
57
81
10
167
28
34
13
23
1.93
33809287--33809394
26
4.2
26
91
0
180
33
7
24
35
1.83
33813435--33813517
30
2.7
31
78
12
84
14
21
0
63
1.29
33813472--33813523
18
2.8
18
76
2
59
7
19
1
71
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33813493--33813517
12
2.1
12
100
0
50
8
16
0
76
1.02
33813586--33813642
5
11.0
5
75
20
55
1
17
1
78
0.91
33813586--33813653
16
4.4
14
77
18
64
2
16
2
77
1.00
33813590--33813638
26
1.9
25
84
12
64
2
16
2
79
0.92
33813586--33813653
21
3.2
21
78
15
70
2
16
2
77
1.00
33815649--33815803
46
3.3
46
72
15
156
22
20
27
29
1.99
33824601--33824760
46
3.5
46
78
9
193
20
21
29
28
1.98
33824598--33824765
91
1.9
91
91
1
248
20
23
29
26
1.99
33832968--33833018
18
2.8
18
77
16
52
17
25
1
54
1.53
33833567--33833611
20
2.2
20
84
0
63
28
35
13
22
1.92

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332