Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  325  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106657959--106658000
21
1.9
23
90
9
70
19
0
11
69
1.19
106658764--106658801
20
1.9
20
94
0
67
39
7
10
42
1.69
106664064--106664118
13
3.9
13
73
17
56
43
1
7
47
1.41
106666699--106666751
23
2.3
23
83
6
63
60
3
1
33
1.26
106675757--106675797
20
2.0
21
90
9
68
48
0
0
51
1.00
106677642--106677684
21
2.0
21
82
8
52
48
6
4
39
1.51
106678809--106678856
19
2.5
19
82
0
60
60
14
8
16
1.57
106680115--106680139
12
2.1
12
100
0
50
36
0
8
56
1.29
106693370--106693415
24
2.0
23
87
8
67
47
15
17
19
1.82
106695054--106695094
10
4.3
9
85
11
55
73
4
2
19
1.13
106695274--106695311
9
4.4
9
87
9
53
76
0
23
0
0.79
106695274--106695321
25
1.9
25
83
8
62
72
2
25
0
0.95
106695272--106695332
25
2.5
24
78
7
61
70
1
27
0
0.97
106702465--106702509
21
2.1
21
88
12
65
24
4
11
60
1.49
106714350--106714378
13
2.1
14
93
6
51
58
3
31
6
1.41
106714607--106714637
2
16.0
2
93
6
55
48
0
51
0
1.00
106718495--106718521
2
13.5
2
100
0
54
0
48
0
51
1.00
106723944--106724067
52
2.3
56
84
12
193
43
12
15
29
1.82
106723961--106724067
52
2.1
52
96
0
196
42
12
15
28
1.83
106724069--106724146
41
1.9
40
89
7
122
15
41
14
29
1.86
106739706--106739749
2
22.0
2
100
0
88
0
50
0
50
1.00
106748527--106748563
18
2.1
18
100
0
74
32
10
24
32
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106749001--106749040
21
1.9
21
89
0
62
42
7
25
25
1.80
106749227--106749302
35
2.2
35
83
9
93
53
5
0
40
1.23
106749337--106749369
16
1.9
18
88
11
52
48
0
3
48
1.17
106752921--106753545
311
2.0
311
100
0
1250
39
10
9
40
1.71
106759781--106759877
48
2.0
48
100
0
194
28
14
12
44
1.81
106761822--106761862
21
2.0
21
90
9
66
26
12
7
53
1.64
106761774--106761906
70
1.9
67
84
4
176
34
12
9
43
1.74
106765625--106765718
48
2.0
47
89
2
143
9
19
15
55
1.68
106766400--106766463
18
3.6
18
80
14
78
17
6
20
56
1.62
106768331--106768374
18
2.6
16
83
13
61
52
0
0
47
1.00
106768336--106768375
18
2.2
18
100
0
80
50
0
0
50
1.00
106770544--106770657
59
1.9
61
82
10
146
43
16
16
22
1.87
106771759--106771819
26
2.5
23
80
12
68
32
0
3
63
1.10
106778424--106778462
21
1.9
21
84
5
53
12
17
10
58
1.61
106779078--106779116
2
19.5
2
100
0
78
0
48
0
51
1.00
106783029--106783065
19
1.9
19
94
0
65
51
2
13
32
1.55
106783076--106783119
24
1.9
22
86
9
61
52
4
9
34
1.54
106783156--106783188
15
2.2
15
89
10
50
54
6
3
36
1.41
106783150--106783197
11
4.0
11
80
19
60
54
8
2
35
1.42
106783150--106783219
26
2.8
26
85
12
85
54
7
1
37
1.37
106783257--106783307
12
4.2
12
75
12
50
58
7
1
31
1.37
106789567--106789615
23
2.1
23
100
0
98
32
14
16
36
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106791440--106791478
20
2.0
20
85
10
53
17
7
2
71
1.21
106792409--106792470
31
2.0
31
90
0
97
46
11
6
35
1.65
106792959--106793025
31
2.2
31
83
0
80
35
20
10
32
1.87
106794335--106794360
3
8.7
3
100
0
52
69
0
30
0
0.89
106801821--106801876
24
2.2
26
81
18
80
39
0
12
48
1.41
106801827--106801876
24
2.1
24
100
0
100
42
0
12
46
1.41
106802189--106802268
21
3.7
22
74
12
60
45
33
2
18
1.63
106802226--106802274
21
2.3
22
85
3
64
46
30
2
20
1.62
106806235--106806273
15
2.5
15
88
12
53
64
10
2
23
1.37
106809205--106809229
13
1.9
13
100
0
50
40
36
16
8
1.77
106810018--106810043
2
13.0
2
100
0
52
50
0
50
0
1.00
106818191--106818228
20
1.9
20
84
10
51
10
5
15
68
1.36
106833273--106833333
32
1.9
32
100
0
122
37
13
14
34
1.85
106836825--106836883
21
2.7
22
89
5
84
28
11
15
44
1.82
106836825--106836889
22
3.0
22
88
6
89
29
12
13
44
1.81
106842177--106842223
20
2.4
19
80
19
53
40
0
2
57
1.11
106866579--106866754
46
3.8
46
75
14
182
21
19
28
30
1.98
106866575--106866746
93
1.8
93
90
2
274
21
20
29
29
1.98
106869566--106869730
49
3.6
46
84
7
153
28
26
14
30
1.95
106869607--106869796
47
4.0
49
82
6
185
31
26
14
27
1.95
106869799--106870009
31
6.8
31
91
0
314
26
27
18
27
1.98
106869985--106870113
50
2.5
51
85
7
190
26
22
16
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106873395--106873453
30
2.0
30
83
12
77
59
1
1
37
1.18
106875491--106875546
18
3.0
18
84
12
69
57
0
0
42
0.99
106875729--106875810
29
2.8
28
87
5
110
60
1
0
37
1.04
106887075--106887118
23
1.9
23
85
0
61
18
15
6
59
1.58
106888346--106888378
16
2.0
17
88
5
50
30
3
0
66
1.06
106888657--106888696
11
3.6
11
79
0
53
22
10
7
60
1.54
106892931--106893000
32
2.2
30
85
7
86
64
1
1
32
1.11
106892929--106892995
22
3.0
22
79
12
68
64
1
1
32
1.12
106892955--106892995
5
8.8
5
79
15
52
60
2
0
36
1.10
106896854--106896878
5
5.0
5
100
0
50
20
0
0
80
0.72
106897562--106897872
3
106.3
3
67
15
134
28
6
2
62
1.32
106897620--106897850
17
14.1
17
68
19
80
27
6
2
64
1.30
106897562--106897848
25
11.4
25
66
21
84
28
6
2
63
1.30
106897562--106897848
17
16.3
18
65
18
70
28
6
2
63
1.30
106897708--106897737
14
2.1
14
93
0
51
43
10
0
46
1.37
106897929--106897954
13
2.0
13
100
0
52
46
7
0
46
1.31
106898060--106898142
11
8.0
11
69
17
61
30
2
3
63
1.24
106898070--106898158
22
4.3
21
75
13
69
32
3
4
59
1.34
106898071--106898149
40
2.0
40
88
7
110
32
3
3
59
1.33
106900309--106900405
40
2.4
40
82
0
104
30
16
23
28
1.96
106900321--106900415
40
2.4
39
75
7
91
27
17
22
32
1.96
106904462--106904509
6
8.0
6
83
0
51
45
22
4
27
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106904477--106904537
18
3.3
18
81
2
77
44
29
4
21
1.73
106904462--106904539
12
6.4
12
77
1
57
44
26
5
23
1.74
106904484--106904532
6
8.2
6
88
0
62
44
32
4
18
1.68
106904665--106904747
43
2.0
42
95
2
148
31
7
15
45
1.73
106906701--106907089
84
4.6
83
78
8
403
32
14
25
28
1.94
106906700--106907088
168
2.3
167
88
0
571
32
14
25
28
1.95
106906956--106907232
143
1.9
142
84
5
362
32
15
25
27
1.95
106907095--106907316
84
2.6
83
83
5
270
32
12
25
29
1.93
106906869--106907471
227
2.7
224
86
4
786
32
14
25
28
1.94
106907179--106907459
143
2.0
143
89
1
438
31
12
26
29
1.93
106907322--106907627
84
3.6
84
78
10
304
32
11
25
30
1.91
106907089--106907782
311
2.2
311
87
3
1009
31
13
26
28
1.94
106906869--106907543
227
3.0
223
82
7
767
32
13
25
28
1.94
106907408--106907843
227
1.9
227
87
2
644
31
13
26
28
1.94
106907493--106907770
143
1.9
143
81
4
328
31
13
26
28
1.94
106907633--106907834
84
2.4
84
85
3
264
30
15
25
28
1.96
106907836--106908074
44
5.4
44
81
5
225
30
14
30
25
1.95
106907881--106908074
44
4.4
43
86
3
235
29
13
30
26
1.94
106907881--106908074
89
2.2
86
84
8
248
29
13
30
26
1.94
106909543--106909866
3
111.3
3
65
14
92
28
7
2
61
1.36
106909535--106909568
9
3.8
9
88
0
50
32
5
0
61
1.20
106909640--106909688
17
2.8
17
79
11
55
22
4
4
69
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106909543--106909664
17
6.9
18
65
19
60
29
4
4
61
1.35
106909844--106909886
21
2.0
22
86
4
61
30
6
2
60
1.35
106912173--106912215
21
2.0
22
86
13
63
37
9
4
48
1.56
106912201--106912226
13
2.0
13
100
0
52
46
7
0
46
1.31
106912357--106912393
18
2.2
18
90
9
60
29
5
0
64
1.15
106912333--106912409
40
2.0
38
92
5
127
32
2
2
62
1.23
106912333--106912421
22
4.2
21
75
18
69
32
3
3
60
1.29
106912714--106912820
41
2.6
41
90
0
169
31
20
25
22
1.98
106913314--106913438
7
17.6
7
79
9
65
70
2
0
27
1.00
106913317--106913437
14
8.4
14
78
9
111
70
2
0
27
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332