Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  320  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105114120--105114183
28
2.3
29
84
10
80
62
0
6
31
1.20
105118556--105118606
27
1.9
26
88
11
77
70
3
3
21
1.20
105121224--105121255
7
4.2
8
92
8
50
84
0
15
0
0.63
105121226--105121252
7
3.9
7
100
0
54
88
0
11
0
0.50
105126399--105126663
18
14.3
18
72
10
149
35
16
12
34
1.87
105126831--105127009
45
4.0
45
92
0
295
40
19
19
20
1.92
105127892--105127916
13
1.9
13
100
0
50
16
12
0
72
1.13
105128228--105128270
23
1.9
22
81
13
52
34
20
0
44
1.52
105132821--105132851
15
2.1
15
93
0
53
22
6
0
70
1.09
105133452--105133478
13
2.1
13
100
0
54
25
0
7
66
1.17
105137012--105137057
17
2.9
15
87
12
65
71
0
4
23
1.03
105137012--105137057
8
5.8
8
82
10
58
71
0
4
23
1.03
105137017--105137057
15
2.5
17
92
7
68
70
0
2
26
0.99
105138847--105138898
26
2.0
26
100
0
104
34
15
3
46
1.64
105142510--105142578
6
11.5
6
95
0
111
28
15
4
50
1.63
105150621--105150650
6
5.0
6
100
0
60
50
16
0
33
1.46
105150786--105150814
2
14.5
2
100
0
58
0
0
48
51
1.00
105160688--105160728
21
2.0
21
95
0
73
19
17
31
31
1.95
105167417--105167456
20
2.0
20
90
0
62
45
12
10
32
1.75
105167404--105167469
34
1.9
35
90
3
107
43
13
9
33
1.76
105167439--105167478
14
2.9
14
84
0
53
42
17
7
32
1.77
105168059--105168139
40
2.0
40
100
0
162
55
12
12
19
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105168365--105168421
28
2.0
28
100
0
114
42
8
31
17
1.80
105171607--105171636
14
2.1
14
93
0
51
46
20
6
26
1.75
105171621--105171797
56
3.2
55
83
4
221
51
11
20
15
1.74
105172754--105172847
40
2.4
40
76
16
99
47
1
3
47
1.25
105175118--105175187
29
2.4
29
81
9
81
40
0
10
50
1.36
105177706--105177736
16
2.0
15
93
6
53
58
0
3
38
1.15
105180610--105180670
30
2.0
30
96
0
113
29
29
13
27
1.94
105190103--105190169
35
1.9
36
87
6
102
58
5
1
34
1.32
105190400--105190521
60
2.0
61
93
1
210
43
9
6
40
1.62
105194457--105194486
15
1.9
16
93
6
53
46
20
3
30
1.66
105196286--105196324
18
2.2
18
85
0
51
56
0
5
38
1.22
105196477--105196531
21
2.7
21
83
8
78
60
1
0
38
1.08
105197287--105197319
17
2.0
17
88
5
50
42
6
0
51
1.26
105197962--105197999
20
1.9
20
84
10
51
18
7
13
60
1.56
105200365--105200441
39
2.0
38
97
2
145
33
18
11
36
1.87
105203141--105203176
19
1.9
18
94
5
63
77
0
0
22
0.76
105203141--105203185
18
2.4
19
88
3
65
77
0
2
20
0.87
105203755--105203818
21
3.0
21
69
28
53
37
3
1
57
1.24
105203856--105203886
13
2.3
14
94
5
55
41
0
6
51
1.27
105204101--105204139
20
2.0
20
90
10
62
35
0
2
61
1.10
105218419--105218487
31
2.2
31
82
5
77
42
2
13
42
1.58
105224108--105224215
53
2.0
53
92
0
180
35
20
12
32
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105228134--105228182
25
1.9
26
87
4
73
40
2
0
57
1.10
105228125--105228188
25
2.5
24
73
12
56
37
1
0
60
1.06
105233592--105233620
14
2.1
14
100
0
58
48
0
0
51
1.00
105236226--105236295
35
2.0
35
100
0
140
20
31
8
40
1.82
105257870--105257906
18
2.1
18
90
5
58
16
27
40
16
1.89
105262372--105262424
24
2.3
23
90
3
79
33
20
24
20
1.97
105267778--105267836
30
2.0
30
86
0
82
32
15
25
27
1.95
105268274--105268392
45
2.6
44
81
9
116
30
19
26
24
1.98
105268957--105269068
56
2.0
56
98
0
215
42
27
12
16
1.85
105269068--105269149
41
2.0
41
100
0
164
39
14
19
26
1.90
105275548--105275575
13
2.2
13
100
0
56
32
14
21
32
1.93
105276233--105276257
12
2.1
12
100
0
50
16
0
0
84
0.63
105285196--105285310
44
2.6
44
81
2
131
36
13
20
28
1.92
105286846--105286887
20
2.0
22
86
9
61
47
0
7
45
1.30
105291427--105291474
20
2.3
21
85
3
62
8
2
18
70
1.22
105294627--105294702
38
2.0
38
100
0
152
50
10
10
28
1.70
105295027--105295071
23
2.0
23
86
8
65
33
0
0
66
0.92
105304984--105305034
15
3.5
15
70
5
50
47
17
15
19
1.83
105308427--105308504
25
3.2
24
66
29
58
51
14
2
32
1.55
105308700--105308740
21
2.1
19
86
9
55
58
0
4
36
1.20
105335872--105335920
23
2.2
22
82
10
55
44
6
0
48
1.27
105335879--105335920
22
1.9
22
85
9
59
47
4
0
47
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105336684--105337766
450
2.4
448
83
4
1302
24
22
23
30
1.99
105339030--105339102
31
2.4
31
84
6
87
41
4
4
50
1.40
105339491--105339585
30
3.1
31
77
14
92
46
2
0
51
1.12
105339532--105339584
18
2.9
18
80
5
54
45
1
0
52
1.11
105347739--105347879
39
3.6
39
88
0
201
17
45
20
17
1.86
105350688--105350731
18
2.3
20
88
7
65
65
0
0
34
0.93
105356068--105356132
29
2.2
29
86
2
85
40
10
10
38
1.75
105357654--105357731
40
2.0
40
84
5
104
52
3
3
39
1.38
105360684--105360718
12
2.9
12
91
0
52
22
51
0
25
1.48
105362208--105362249
17
2.6
16
82
17
52
28
0
2
69
1.01
105363101--105363151
25
2.0
25
100
0
102
27
7
15
49
1.72
105364767--105364846
42
1.9
42
84
0
106
37
27
7
27
1.84
105369256--105369295
20
2.0
20
95
0
71
50
0
2
47
1.14
105369506--105369550
18
2.4
19
82
13
58
64
0
35
0
0.94
105380493--105380518
11
2.4
11
100
0
52
76
0
0
23
0.78
105382052--105382138
21
4.0
23
80
10
92
37
25
21
14
1.92
105386671--105386759
44
2.0
44
100
0
178
35
17
13
32
1.89
105391620--105391688
34
2.0
34
94
0
120
40
11
5
42
1.65
105393467--105393493
9
3.0
9
100
0
54
33
0
0
66
0.92
105394632--105394674
20
2.2
20
100
0
86
37
18
0
44
1.50
105402136--105402160
4
6.2
4
100
0
50
24
0
0
76
0.80
105407268--105407292
3
8.3
3
100
0
50
0
0
64
36
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105414030--105414076
15
3.0
16
75
6
51
38
0
12
48
1.41
105422033--105422175
71
2.0
71
100
0
286
21
25
16
36
1.94
105432374--105432406
2
16.5
2
100
0
66
51
0
48
0
1.00
105438981--105439089
42
2.6
42
94
0
182
27
14
16
41
1.87
105439063--105439116
27
2.0
27
96
0
99
25
20
11
42
1.85
105439123--105439156
16
2.1
16
100
0
68
29
5
11
52
1.61
105441765--105441805
20
2.0
20
85
0
55
56
2
0
41
1.13
105451981--105452011
16
1.9
16
93
0
53
48
19
3
29
1.64
105456773--105456853
5
14.8
5
75
15
54
4
11
4
79
1.05
105456773--105456854
17
4.9
16
80
7
92
4
10
4
79
1.04
105456778--105456853
28
2.7
26
78
15
73
5
11
3
78
1.04
105456773--105456863
33
2.7
33
86
3
119
5
9
5
79
1.06
105456778--105456842
12
5.8
11
75
12
53
4
12
4
78
1.06
105456809--105456853
24
1.9
24
86
4
65
4
11
4
80
1.01
105456874--105456951
17
4.4
17
69
26
54
12
5
3
78
1.06
105456881--105456952
9
7.9
9
73
7
65
12
4
4
79
1.02
105456962--105457023
28
2.2
29
97
2
117
43
0
4
51
1.23
105457743--105457858
29
4.2
29
67
18
102
54
6
0
37
1.33
105457892--105457931
10
3.9
10
90
3
62
85
0
5
10
0.75
105457868--105457938
36
2.0
34
83
5
88
80
1
5
12
0.95
105457871--105458034
17
9.9
16
67
16
61
76
1
8
12
1.08
105457953--105458029
26
2.9
25
72
22
66
79
1
9
10
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105457967--105458034
29
2.3
29
92
0
118
79
1
10
8
1.00
105459022--105459061
14
2.7
16
74
18
50
50
5
0
45
1.23
105463840--105463880
16
2.6
16
78
21
50
31
0
2
65
1.05
105471430--105471486
30
2.0
29
83
10
73
33
15
15
35
1.90
105472226--105472405
96
1.9
96
86
0
261
47
10
11
30
1.73
105480631--105480678
6
8.3
6
86
9
55
22
0
27
50
1.50
105480631--105480678
16
2.8
18
78
12
55
22
0
27
50
1.50
105480728--105480763
6
5.7
6
87
12
54
30
2
19
47
1.64
105480735--105480778
20
2.2
20
83
0
52
29
4
18
47
1.68
105484046--105484089
19
2.3
19
88
4
61
56
2
6
34
1.38

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332