Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  321  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105484150--105484225
39
1.9
39
84
12
102
55
1
2
40
1.22
105484172--105484226
10
5.6
10
75
12
60
58
0
0
41
0.98
105484172--105484237
20
3.4
19
79
6
69
57
0
1
40
1.08
105484447--105484567
20
6.1
20
71
12
61
39
5
0
53
1.31
105484473--105484516
19
2.3
19
80
0
52
43
6
0
50
1.29
105484532--105484581
20
2.5
20
80
12
57
44
6
0
50
1.26
105497677--105497702
2
13.0
2
100
0
52
0
50
0
50
1.00
105499280--105499335
24
2.3
24
76
11
69
44
0
1
53
1.11
105499535--105499582
13
3.7
13
85
0
60
29
16
2
52
1.56
105499524--105499588
13
4.9
14
75
9
57
33
13
4
47
1.64
105501571--105501756
69
2.7
69
84
1
230
40
11
14
32
1.82
105504146--105504298
75
2.0
75
98
0
297
48
7
9
34
1.64
105504827--105504863
19
1.9
19
88
0
56
81
8
0
10
0.89
105511859--105511956
51
1.9
52
87
2
144
31
15
15
37
1.88
105515021--105515236
69
3.1
68
77
7
229
39
11
18
31
1.85
105515489--105515595
53
2.0
54
92
1
180
29
14
14
41
1.86
105516369--105516399
8
3.9
8
100
0
62
64
0
35
0
0.94
105516429--105516483
26
2.2
25
83
9
67
23
3
14
58
1.52
105521137--105521335
69
2.9
69
78
4
213
41
12
14
32
1.82
105521837--105521875
20
2.0
19
85
14
53
51
0
10
38
1.36
105521941--105521986
20
2.3
20
76
0
56
32
2
2
63
1.19
105525991--105526090
51
2.0
51
91
0
164
30
16
14
40
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105527615--105527667
20
2.7
20
88
11
74
33
0
7
58
1.26
105529364--105529400
8
4.6
8
100
0
74
13
10
13
62
1.55
105532068--105532247
69
2.6
69
87
0
252
45
9
12
32
1.74
105533380--105533406
11
2.5
11
100
0
54
66
0
33
0
0.92
105533435--105533488
26
2.2
24
83
12
65
24
3
14
57
1.54
105533523--105533558
3
12.0
3
87
0
54
2
27
0
69
1.02
105536770--105536861
47
2.0
47
88
0
139
31
6
16
45
1.72
105537827--105537865
5
7.8
5
88
11
62
17
2
0
79
0.84
105540206--105540249
22
2.0
22
91
8
72
45
9
9
36
1.68
105542895--105542967
18
4.1
18
87
0
101
34
20
10
34
1.88
105544240--105544271
16
2.0
16
93
0
55
12
6
40
40
1.68
105544274--105544313
15
2.7
15
84
11
55
17
10
35
37
1.83
105549577--105549792
69
3.1
69
81
1
236
37
11
20
30
1.88
105555128--105555202
17
4.3
18
76
10
75
34
2
1
61
1.18
105555218--105555264
20
2.3
21
89
10
71
27
4
6
61
1.39
105555188--105555330
46
3.1
46
75
9
121
27
4
5
61
1.39
105555398--105555452
20
2.7
21
81
16
62
21
7
3
67
1.31
105558308--105558601
69
4.3
68
81
3
313
40
12
15
31
1.85
105558336--105558601
138
1.9
137
84
0
352
40
12
15
30
1.85
105558772--105558850
38
2.1
39
85
7
108
34
7
10
48
1.65
105571020--105571162
47
3.0
47
85
2
198
32
6
13
48
1.67
105573418--105573669
138
1.8
138
86
1
362
42
11
17
28
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105573416--105573659
69
3.5
69
84
1
319
43
11
16
29
1.83
105574420--105574484
30
2.2
30
83
2
87
50
4
7
36
1.52
105574558--105574617
29
2.1
29
100
0
120
20
6
10
63
1.47
105579912--105579945
11
3.1
11
82
0
50
70
2
0
26
1.01
105579916--105579965
21
2.4
22
80
16
61
66
2
0
32
1.03
105580871--105580912
20
2.1
20
95
0
75
30
21
9
38
1.85
105581533--105581557
6
4.2
6
100
0
50
84
0
0
16
0.63
105588077--105588107
16
1.9
16
93
0
53
29
0
3
67
1.06
105592190--105592265
23
3.3
23
96
0
143
31
26
21
21
1.98
105592477--105592515
18
2.2
17
86
13
53
46
20
0
33
1.51
105599509--105599584
23
3.3
23
96
0
143
31
26
21
21
1.98
105599795--105599833
18
2.2
17
86
13
53
46
20
0
33
1.51
105603884--105603917
15
2.1
15
89
10
50
2
26
0
70
1.01
105606216--105606397
69
2.6
69
77
6
170
43
10
13
32
1.77
105607572--105607661
40
2.2
40
80
13
94
32
5
11
51
1.61
105618350--105618379
15
1.9
16
93
6
53
36
0
0
63
0.95
105618881--105618915
18
1.9
18
88
0
52
48
0
17
34
1.47
105626779--105627057
139
2.0
139
100
0
558
31
17
17
34
1.93
105628139--105628200
31
2.0
31
90
3
99
51
12
0
35
1.40
105628473--105628508
7
5.0
7
96
3
63
30
0
0
69
0.89
105633584--105633617
16
2.1
16
88
0
50
61
5
0
32
1.20
105634101--105634325
111
2.0
110
93
0
378
51
9
7
32
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105638645--105638678
16
2.0
18
88
11
54
32
0
0
67
0.91
105640156--105640189
12
2.8
12
91
8
52
8
17
5
67
1.37
105641729--105641884
78
2.0
78
97
0
294
44
16
17
22
1.87
105642065--105642199
40
3.4
40
81
4
150
37
19
21
22
1.95
105642236--105642395
41
3.9
41
92
0
257
20
23
26
30
1.98
105642891--105642917
13
2.1
13
100
0
54
40
0
7
51
1.30
105643033--105643065
14
2.3
15
94
5
59
36
0
27
36
1.57
105643130--105643161
15
2.1
16
94
5
57
21
0
31
46
1.52
105643216--105643278
26
2.4
26
81
0
72
19
4
42
33
1.72
105646052--105646078
14
1.9
14
100
0
54
40
7
0
51
1.30
105647852--105648069
43
5.1
41
82
5
213
22
15
32
30
1.94
105647885--105648069
43
4.3
42
85
3
235
22
16
32
28
1.96
105647852--105648069
85
2.6
85
83
2
287
22
15
32
30
1.94
105648657--105648703
23
2.1
22
84
4
58
63
8
0
27
1.23
105649330--105649386
22
2.6
22
86
8
71
42
5
7
45
1.53
105650331--105650365
18
1.9
18
88
11
54
62
0
0
37
0.95
105651493--105651537
22
2.1
22
83
4
56
53
0
4
42
1.21
105689218--105689256
19
1.9
19
85
10
51
30
5
15
48
1.66
105711606--105711641
9
3.9
9
96
3
63
52
0
2
44
1.15
105711607--105711705
49
2.1
47
81
7
110
46
0
2
51
1.12
105725377--105725423
24
1.9
25
86
4
69
74
2
21
2
1.03
105727241--105727288
24
2.0
25
84
8
64
35
0
4
60
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105727413--105727463
26
2.0
26
88
7
77
58
1
0
39
1.09
105727405--105727463
25
2.4
24
78
15
66
59
1
1
37
1.18
105730138--105730183
24
2.0
24
95
4
85
58
6
4
30
1.43
105739990--105740041
28
1.9
28
84
7
72
65
1
0
32
1.04
105739989--105740051
28
2.2
30
78
13
71
65
1
0
33
1.03
105739999--105740032
16
2.1
17
88
5
52
70
0
0
29
0.87
105741465--105741494
15
2.0
15
93
0
51
6
0
16
76
0.99
105741589--105741645
22
2.7
22
75
5
55
57
22
5
14
1.56
105741885--105741920
4
8.8
4
87
6
54
22
2
0
75
0.94
105741885--105741921
13
2.9
13
92
4
58
21
2
0
75
0.92
105743411--105743461
24
2.1
24
82
10
59
29
3
3
62
1.31
105748671--105748919
50
4.8
50
85
4
284
20
29
24
26
1.99
105748670--105748919
100
2.4
104
88
6
357
20
29
24
26
1.99
105749014--105749045
13
2.5
13
94
0
55
56
12
0
31
1.37
105749257--105749314
30
1.9
30
89
0
89
31
24
3
41
1.71
105756263--105756511
50
4.8
50
85
4
284
20
29
24
26
1.99
105756262--105756511
100
2.4
104
88
6
357
20
29
24
26
1.99
105756606--105756637
13
2.5
13
94
0
55
56
12
0
31
1.37
105756849--105756906
30
1.9
30
89
0
89
31
24
3
41
1.71
105764510--105764684
72
2.5
71
82
5
187
28
14
21
35
1.93
105764684--105764849
72
2.3
70
85
6
224
22
14
19
42
1.88
105764782--105765535
140
5.5
140
93
4
1277
25
16
20
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105765259--105765528
127
2.1
128
93
4
465
25
16
20
37
1.93
105765562--105765657
49
2.0
49
95
0
174
31
16
19
32
1.94
105765611--105765964
79
4.7
75
86
5
430
31
16
18
32
1.94
105765887--105766057
93
1.8
93
83
5
229
26
19
19
33
1.96
105765813--105766119
171
1.8
167
86
4
445
29
18
20
31
1.96
105765973--105766184
79
2.7
78
83
4
239
31
18
17
32
1.95
105765973--105766334
79
4.5
79
72
13
237
29
17
18
34
1.94
105765739--105766544
245
3.3
243
81
8
824
28
16
18
35
1.94
105766316--105766377
30
2.1
30
87
6
90
17
9
30
41
1.82
105771321--105771440
59
2.0
60
96
1
224
21
8
16
53
1.69

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332