Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  326  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106913331--106913437
22
4.9
22
85
6
128
71
0
0
28
0.93
106913331--106913440
7
15.1
7
85
7
139
70
0
0
29
0.94
106917157--106917204
20
2.4
21
82
10
64
22
2
6
68
1.23
106918970--106919018
17
2.7
19
84
12
75
36
10
14
38
1.80
106926059--106926172
25
4.5
25
75
9
81
24
3
7
64
1.37
106926068--106926138
26
2.8
25
78
2
79
23
1
9
64
1.32
106926085--106926176
27
3.4
28
73
15
77
25
5
6
63
1.40
106926835--106926868
17
2.0
17
94
0
59
29
26
11
32
1.92
106933598--106933642
22
2.0
22
91
0
72
48
15
2
33
1.57
106937366--106937410
22
2.0
22
91
0
72
48
15
2
33
1.57
106938259--106938301
20
2.2
20
86
0
59
23
6
11
58
1.57
106938901--106938938
17
2.1
18
90
9
60
31
5
0
63
1.17
106939780--106939850
29
2.5
28
82
8
81
42
0
1
56
1.08
106939780--106939850
28
2.5
29
80
13
76
42
0
1
56
1.08
106939813--106939868
19
2.8
20
83
8
60
44
0
1
53
1.11
106939814--106939869
20
2.8
20
76
12
71
44
0
1
53
1.11
106954524--106954564
20
2.1
20
90
4
66
60
2
4
31
1.30
106962220--106962249
15
1.9
16
93
6
53
73
0
6
20
1.05
106962284--106962313
15
1.9
16
93
6
53
76
0
23
0
0.78
106967400--106967480
39
2.1
39
92
0
135
28
6
11
54
1.59
106970195--106970245
13
3.9
13
81
0
66
33
7
23
35
1.84
106971196--106971349
30
5.2
30
89
3
240
51
1
10
35
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106971520--106971572
21
2.5
21
90
0
79
30
35
9
24
1.87
106978295--106978352
19
2.9
20
82
17
84
56
0
0
43
0.99
106978295--106978355
28
2.1
29
82
14
74
59
0
0
40
0.98
106978728--106978765
6
6.3
6
100
0
76
15
34
0
50
1.45
106992908--106992972
32
2.0
32
100
0
130
30
6
24
38
1.80
106997308--106997336
7
4.3
7
95
4
51
58
0
0
41
0.98
107000956--107001006
25
2.0
25
84
0
66
58
5
0
35
1.22
107003844--107003890
20
2.3
20
88
0
67
21
8
4
65
1.37
107004426--107004676
131
1.9
132
89
2
389
28
20
19
31
1.97
107004426--107004707
131
2.1
132
86
1
388
30
19
18
31
1.96
107004434--107004781
131
2.7
131
79
7
357
27
19
19
32
1.96
107022480--107022524
22
2.0
22
83
8
56
35
26
17
20
1.95
107024315--107024467
43
3.6
43
82
7
127
32
26
15
26
1.95
107028808--107029031
47
4.6
48
80
9
199
30
28
15
25
1.96
107031430--107031459
10
3.0
10
100
0
60
10
20
0
70
1.16
107032269--107032401
52
2.5
52
85
3
160
25
18
28
27
1.98
107037943--107038114
45
3.9
45
90
1
267
22
20
30
26
1.98
107047892--107047930
6
6.5
6
93
0
69
53
0
46
0
1.00
107051511--107051562
27
2.0
27
85
7
72
55
1
11
30
1.46
107051511--107051592
29
3.0
25
79
15
67
56
1
9
32
1.40
107051793--107051854
29
2.3
27
81
13
74
43
4
20
30
1.73
107051966--107052012
21
2.3
20
79
13
51
57
4
2
36
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107051978--107052040
21
3.0
21
76
19
60
53
0
6
39
1.26
107055319--107055459
27
5.2
26
82
6
165
19
23
23
34
1.97
107055319--107055457
54
2.6
54
89
4
210
19
23
23
33
1.97
107060674--107060705
15
2.1
16
88
11
50
81
3
9
6
0.97
107086330--107086358
3
9.7
3
100
0
58
0
31
0
68
0.89
107087837--107087878
18
2.4
17
84
11
50
61
0
2
35
1.09
107087952--107088022
30
2.3
31
85
2
99
39
4
9
46
1.57
107089273--107089313
12
3.5
12
78
15
50
36
2
0
60
1.10
107089426--107089472
22
2.2
21
88
3
67
29
6
2
61
1.32
107089434--107089481
22
2.3
21
85
7
62
29
6
0
64
1.18
107093784--107093825
20
2.0
20
86
4
57
50
14
14
21
1.78
107100013--107100119
53
2.0
53
98
0
205
27
13
19
40
1.88
107107548--107107572
12
2.1
12
100
0
50
16
40
8
36
1.77
107111061--107111165
37
2.9
37
91
2
169
24
21
17
36
1.95
107111129--107111488
46
7.6
46
85
9
472
30
21
13
34
1.92
107111140--107111488
143
2.4
144
95
1
630
30
21
14
34
1.92
107114358--107114394
18
2.1
18
90
10
58
35
27
8
29
1.85
107123735--107123772
11
3.5
11
85
3
51
71
7
10
10
1.32
107129172--107129255
28
3.0
29
74
10
77
40
1
11
46
1.48
107129853--107129993
48
2.9
48
92
2
221
26
8
18
46
1.78
107130789--107130870
37
2.2
39
79
16
93
40
2
0
57
1.12
107133369--107133398
3
10.0
3
100
0
60
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107135016--107135053
19
2.0
19
90
10
60
21
0
2
76
0.91
107136672--107136779
26
4.2
26
89
0
162
33
5
23
37
1.78
107138326--107138466
27
5.2
26
84
6
183
17
24
23
34
1.96
107138326--107138466
54
2.6
53
90
2
210
17
24
23
34
1.96
107138326--107138484
27
5.9
26
83
7
140
18
25
22
33
1.96
107139632--107139672
11
3.7
11
83
0
55
24
17
2
56
1.53
107139709--107139771
30
2.1
30
94
5
110
26
3
12
57
1.51
107150841--107150886
22
2.1
22
92
4
76
39
10
0
50
1.38
107150850--107150892
22
2.0
22
90
4
70
44
6
0
48
1.29
107153423--107153468
24
1.9
24
90
0
74
36
2
6
54
1.39
107153930--107153989
31
1.9
31
82
0
75
43
10
15
31
1.79
107153929--107153996
31
2.2
31
78
0
73
45
10
13
30
1.76
107171766--107171837
31
2.4
31
88
4
103
51
2
6
38
1.43
107181183--107181225
15
2.8
15
82
3
50
27
2
6
62
1.33
107181939--107181970
17
1.9
16
93
6
55
37
6
0
56
1.25
107188859--107188947
31
2.9
29
77
12
81
33
7
12
46
1.71
107189068--107189124
29
1.9
30
92
3
98
54
14
5
26
1.61
107189871--107189931
32
1.9
32
87
9
90
42
6
11
39
1.67
107192577--107192642
31
2.1
31
86
5
89
42
10
12
34
1.77
107199631--107199676
20
2.2
20
85
14
58
36
4
2
56
1.31
107200559--107200833
144
1.9
143
80
6
315
46
16
10
27
1.79
107203036--107203063
13
2.2
13
100
0
56
32
0
25
42
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107203976--107204049
31
2.4
31
86
4
96
32
22
21
22
1.98
107204569--107204632
29
2.2
29
83
8
76
26
10
7
54
1.62
107204947--107204976
14
2.1
15
93
6
53
13
0
0
86
0.57
107221674--107221711
15
2.5
15
100
0
76
47
44
0
7
1.32
107222931--107222979
18
2.8
18
79
14
66
34
8
0
57
1.29
107222913--107222979
35
1.9
35
85
11
93
35
7
0
56
1.27
107235345--107235459
46
2.5
46
83
5
137
33
21
19
26
1.97
107235556--107235850
44
6.8
43
72
9
190
30
20
22
26
1.98
107235562--107235762
87
2.3
85
83
5
244
29
20
23
26
1.99
107235603--107235876
129
2.1
128
86
3
372
29
21
21
27
1.98
107235649--107235876
44
5.3
41
73
9
161
30
20
21
28
1.98
107236070--107236107
15
2.5
15
100
0
76
47
44
0
7
1.32
107237323--107237371
18
2.8
18
79
14
66
34
8
0
57
1.29
107237307--107237371
35
1.9
35
84
12
91
35
7
0
56
1.28
107247641--107247673
17
2.0
17
88
5
50
48
0
6
45
1.27
107248286--107248355
17
4.0
17
73
17
63
54
2
1
41
1.24
107248297--107248355
15
3.7
15
75
16
55
55
1
1
40
1.20
107248801--107248847
23
2.0
23
100
0
94
42
12
4
40
1.63
107249360--107249399
19
2.1
19
95
0
71
62
2
5
30
1.29
107255900--107255937
20
1.9
20
84
10
51
60
5
5
28
1.40
107261697--107261758
31
2.0
31
93
0
106
50
4
20
24
1.68
107265584--107265619
17
2.1
17
100
0
72
58
5
11
25
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107266474--107266559
34
2.5
33
80
10
93
61
1
3
33
1.20
107266502--107266553
20
2.7
20
85
5
72
63
0
3
32
1.12
107266516--107266582
25
2.7
25
80
11
68
64
0
4
31
1.14
107266663--107266805
46
3.2
44
73
21
120
62
1
3
32
1.21
107266694--107266757
35
1.9
33
84
12
87
60
3
3
32
1.28
107266683--107266842
15
10.1
16
66
27
76
61
1
3
32
1.24
107266742--107266877
41
3.2
40
77
14
105
62
2
4
30
1.29
107266663--107266854
87
2.2
91
79
12
199
61
2
4
32
1.27
107266872--107266905
14
2.3
15
90
5
52
67
2
2
26
1.19
107268888--107269123
117
2.0
117
95
0
427
33
14
19
33
1.92

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332