Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  126  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41071220--41071247
14
2.0
14
100
0
56
14
14
42
28
1.84
41071177--41071290
57
2.0
57
92
0
192
12
21
35
31
1.90
41071237--41071401
43
3.8
43
94
0
294
10
23
33
32
1.89
41071134--41071333
100
2.0
100
97
0
373
11
23
34
31
1.90
41071095--41071376
143
2.0
143
94
0
492
11
22
34
31
1.89
41071049--41071401
186
1.9
186
94
0
625
11
24
33
30
1.90
41071235--41071442
86
2.4
86
87
6
280
13
23
33
29
1.93
41075938--41076113
46
3.8
46
77
4
183
22
20
27
29
1.98
41075934--41076105
93
1.8
93
89
0
272
22
20
28
28
1.99
41080455--41080518
31
2.1
31
100
0
128
39
12
6
42
1.68
41080556--41080642
40
2.2
40
85
0
111
18
26
19
35
1.95
41084234--41084296
26
2.4
26
81
2
72
15
6
4
73
1.21
41084242--41084310
29
2.4
28
81
13
79
17
8
4
69
1.31
41084299--41084330
16
2.1
15
94
5
55
18
9
0
71
1.12
41085016--41085072
10
5.6
10
81
4
60
26
24
15
33
1.95
41085016--41085072
21
2.8
20
86
5
78
26
24
15
33
1.95
41085285--41085319
13
2.7
13
95
0
61
31
0
5
62
1.18
41087336--41087420
6
13.5
6
77
18
75
14
1
5
78
0.99
41087349--41087420
32
2.3
31
83
13
85
15
0
6
77
0.96
41107871--41107909
21
1.9
19
85
10
51
28
17
30
23
1.97
41115876--41115915
14
2.9
14
84
0
53
25
7
27
40
1.82
41131098--41131215
37
3.2
37
93
1
191
27
32
16
23
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41131365--41131660
145
2.0
145
90
4
472
31
26
6
35
1.83
41131365--41131660
48
6.1
48
91
5
470
31
26
6
35
1.83
41139864--41139927
32
2.0
33
96
3
121
34
6
20
39
1.78
41147134--41147313
40
4.4
40
79
6
148
27
30
20
21
1.98
41147161--41147304
40
3.6
41
84
6
179
27
29
22
21
1.99
41155353--41155536
40
4.7
40
83
8
225
23
22
28
25
1.99
41158929--41159151
41
5.5
40
81
6
200
27
29
21
22
1.99
41158955--41159152
81
2.4
81
85
6
276
27
28
21
21
1.99
41158956--41159140
41
4.6
41
88
4
261
27
28
21
22
1.99
41162089--41162128
19
2.2
18
90
4
62
45
12
2
40
1.56
41175835--41175879
13
3.3
14
81
12
58
68
0
24
6
1.13
41175849--41175879
15
2.0
16
93
6
55
67
0
25
6
1.14
41179012--41179082
29
2.5
28
84
6
88
35
9
7
47
1.64
41185173--41185214
8
5.4
8
82
5
59
64
2
2
30
1.19
41188520--41188634
27
4.3
26
82
5
131
35
22
24
17
1.95
41190245--41190380
26
5.2
26
97
0
245
37
24
4
33
1.75
41191953--41191994
12
3.6
12
80
6
50
78
2
0
19
0.86
41192042--41192112
37
1.9
37
94
0
124
43
19
16
19
1.88
41195415--41195441
14
1.9
14
100
0
54
18
7
7
66
1.40
41208167--41208383
47
4.6
47
94
1
353
32
7
30
29
1.86
41225571--41225743
93
1.9
93
87
0
256
28
28
19
23
1.98
41225999--41226156
41
3.9
39
75
11
126
25
29
21
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41225999--41226142
40
3.6
41
75
6
134
26
28
21
23
1.99
41229683--41229786
40
2.6
39
83
6
111
25
27
20
26
1.99
41229726--41229816
40
2.3
40
84
3
112
28
27
18
25
1.98
41237497--41237639
39
3.7
38
79
10
121
25
27
20
25
1.99
41245223--41245380
41
3.9
39
81
10
169
26
29
22
22
1.99
41245223--41245366
40
3.6
40
83
10
170
27
28
22
22
1.99
41248600--41248774
46
3.8
45
75
7
172
28
29
20
22
1.98
41248608--41248779
93
1.8
93
89
0
272
27
29
20
22
1.98
41257392--41257583
40
4.8
40
83
7
232
23
22
28
26
1.99
41257392--41257621
40
5.8
40
80
7
231
23
22
27
26
1.99
41258664--41259432
383
2.0
385
94
1
1355
28
22
21
27
1.99
41265477--41265707
40
5.8
40
84
6
267
23
23
27
25
2.00
41273938--41273983
24
1.9
24
86
0
65
30
21
6
41
1.78
41277075--41277268
47
4.1
47
91
0
289
33
11
28
26
1.91
41277104--41277222
22
5.1
22
62
28
59
31
13
30
24
1.93
41277238--41277614
48
7.8
48
95
1
648
33
5
28
31
1.81
41277761--41277865
37
2.8
37
95
0
183
22
20
32
24
1.98
41286462--41286711
47
5.3
47
90
1
349
32
10
30
27
1.89
41286433--41286732
47
6.4
46
86
7
340
33
9
30
27
1.87
41289291--41289647
40
8.9
40
89
1
527
25
22
26
25
2.00
41293029--41293332
47
6.4
47
90
3
407
33
9
30
26
1.88
41297513--41297538
6
4.3
6
100
0
52
15
0
0
84
0.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41303887--41304009
61
2.0
61
100
0
246
22
19
16
41
1.90
41310827--41310953
43
3.0
42
78
11
159
29
25
14
29
1.95
41316806--41316847
21
2.0
21
86
4
59
26
26
35
11
1.91
41318298--41318425
46
2.8
46
92
0
211
27
28
22
21
1.99
41320322--41320410
30
3.0
30
80
8
101
57
15
16
10
1.65
41320322--41320401
15
5.4
15
80
7
92
58
13
17
10
1.62
41320333--41320410
15
5.2
15
78
9
79
56
15
16
11
1.67
41323316--41323444
46
2.8
46
91
2
215
29
27
20
22
1.99
41325313--41325481
49
3.5
49
80
8
202
24
28
18
28
1.98
41325304--41325572
98
2.8
94
80
9
278
23
27
18
30
1.98
41334662--41334724
26
2.4
26
94
0
108
47
14
4
33
1.65
41351227--41351551
149
2.2
149
96
0
605
34
23
15
27
1.94
41351760--41351826
35
1.9
35
96
0
125
38
25
11
23
1.89
41357109--41357268
39
4.1
39
90
0
248
21
22
30
25
1.99
41390240--41390806
297
1.9
297
99
0
1125
36
19
10
34
1.85
41391317--41391355
21
1.9
20
84
5
51
69
5
2
23
1.21
41392630--41392658
6
4.8
6
100
0
58
31
0
34
34
1.58
41392726--41392762
6
6.5
6
96
3
60
10
16
0
72
1.10
41393012--41393076
33
2.0
33
90
0
103
27
21
20
30
1.98
41412248--41412342
43
2.2
43
83
7
113
34
22
16
26
1.95
41415466--41415581
47
2.5
47
81
2
135
23
16
29
31
1.96
41418507--41418537
15
2.1
15
100
0
62
45
12
9
32
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41420980--41421026
25
2.0
23
84
16
60
10
27
2
59
1.42
41424309--41424394
43
2.0
43
100
0
172
41
4
25
27
1.75
41430979--41431009
4
7.8
4
100
0
62
51
22
0
25
1.48
41432955--41433177
48
4.7
47
87
5
297
28
20
30
21
1.98
41432955--41433177
96
2.3
96
89
3
342
28
20
30
21
1.98
41440646--41440913
48
5.6
48
79
7
267
26
20
29
23
1.99
41443488--41443629
34
4.3
33
68
16
80
47
16
4
31
1.68
41443481--41443631
66
2.3
66
87
2
205
45
17
4
31
1.69
41445344--41445428
41
2.1
41
82
4
100
14
23
25
36
1.93
41450059--41450149
45
2.0
45
80
4
103
26
24
16
32
1.96
41457930--41458045
43
2.7
43
76
6
119
31
26
18
24
1.97
41465226--41465264
21
1.9
21
94
5
71
58
20
5
15
1.55
41467512--41467550
12
3.2
12
89
10
53
58
0
0
41
0.98
41478443--41478475
16
2.1
16
88
11
50
81
3
0
15
0.80
41484743--41484796
25
2.1
26
82
3
65
33
1
3
61
1.25
41489495--41489539
19
2.5
17
80
13
54
51
6
2
40
1.41
41489502--41489539
19
2.0
19
94
0
67
57
5
2
34
1.35
41491456--41491500
19
2.4
20
82
10
51
42
2
0
55
1.12
41493119--41493242
28
4.4
28
75
4
115
29
15
27
28
1.96
41493119--41493245
57
2.2
56
87
1
191
29
14
27
28
1.96
41493199--41493273
28
2.7
28
85
4
89
24
16
34
25
1.95
41495475--41495603
47
2.7
47
82
8
163
26
20
31
22
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41495293--41495957
335
2.0
335
97
0
1267
30
15
24
29
1.96
41495810--41496079
47
5.8
45
75
15
196
27
18
30
23
1.98
41504722--41504773
24
2.1
25
82
10
63
48
5
0
46
1.26
41504879--41504948
29
2.3
29
85
9
88
51
4
1
42
1.30
41509457--41509593
5
25.0
6
65
28
58
49
2
1
45
1.25
41509461--41509561
51
2.0
52
86
5
143
49
2
0
46
1.23
41509459--41509561
42
2.5
39
78
13
100
50
2
0
45
1.23
41509459--41509593
16
7.8
18
69
21
69
50
2
1
45
1.26
41511168--41511237
30
2.3
30
82
0
95
22
31
12
32
1.92
41511226--41511301
29
2.6
30
89
4
118
18
26
9
46
1.79

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332