Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  99  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31910799--31910846
23
2.1
23
100
0
96
29
16
14
39
1.88
31914936--31915013
21
3.7
21
71
10
61
19
15
16
48
1.81
31914950--31915063
42
2.7
42
84
2
131
20
18
16
44
1.87
31923537--31923731
42
4.5
42
79
4
167
29
25
14
30
1.95
31931884--31931991
44
2.4
44
87
3
144
29
23
13
33
1.93
31934342--31934442
20
5.1
20
69
4
78
39
19
27
12
1.89
31940211--31940314
45
2.3
45
85
3
129
34
17
24
24
1.96
31940179--31940391
113
1.9
113
88
1
320
32
18
24
23
1.97
31948243--31948272
16
1.9
16
93
6
53
23
26
13
36
1.92
31954876--31954932
3
19.0
3
100
0
114
66
0
0
33
0.92
31958162--31958203
16
2.8
14
89
7
57
80
2
0
16
0.81
31960791--31960867
38
2.0
38
100
0
154
33
29
7
28
1.85
31962403--31962447
3
15.0
3
95
0
81
0
35
0
64
0.94
31963177--31963216
20
2.0
21
90
5
64
62
0
0
37
0.95
31966685--31966785
35
2.9
35
92
1
159
64
7
7
19
1.45
31966685--31966845
34
4.7
34
76
8
157
60
10
8
19
1.55
31966832--31966918
40
2.2
40
82
2
102
57
11
2
28
1.46
31985565--31985593
13
2.1
14
93
6
51
55
3
0
41
1.17
31987787--31987822
17
2.1
17
94
0
63
47
16
11
25
1.79
31991659--31991703
18
2.5
18
81
0
54
33
15
15
35
1.89
31992389--31992429
10
4.3
10
81
9
50
0
21
0
78
0.76
31992394--31992433
19
2.1
19
95
0
71
0
27
0
72
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31992481--31992513
16
2.0
17
88
5
50
12
12
3
72
1.23
31997695--31997739
18
2.5
18
81
0
54
33
15
15
35
1.89
31998429--31998468
19
2.1
19
95
0
71
0
27
0
72
0.85
31998516--31998548
16
2.0
17
88
5
50
12
12
3
72
1.23
32005848--32005960
53
2.2
53
85
1
147
41
17
15
25
1.88
32013963--32014119
3
52.0
3
66
15
56
56
1
8
33
1.40
32014119--32014150
16
2.0
16
93
0
55
50
6
21
21
1.71
32014252--32014297
16
2.8
16
83
6
56
60
0
8
30
1.26
32014394--32014432
3
13.0
3
100
0
78
66
0
0
33
0.92
32014528--32014564
3
12.0
3
94
5
65
64
0
0
35
0.94
32030339--32030563
40
5.7
40
82
6
233
25
28
21
25
1.99
32030495--32030572
40
1.9
41
82
10
97
26
28
20
24
1.99
32036957--32037362
208
1.9
208
85
4
559
29
16
18
34
1.94
32051489--32051539
18
2.8
18
90
0
75
27
23
15
33
1.95
32058482--32058585
40
2.6
40
87
0
154
31
29
15
23
1.95
32061664--32061771
26
4.2
26
93
0
189
36
24
7
32
1.83
32065136--32065197
25
2.5
24
82
10
70
38
11
12
37
1.80
32066048--32066075
13
2.2
13
100
0
56
53
17
14
14
1.73
32072626--32072658
14
2.4
14
100
0
66
42
12
9
36
1.74
32073273--32073319
21
2.5
20
80
16
55
61
2
34
2
1.20
32075509--32075576
22
3.1
22
75
8
68
70
5
13
10
1.32
32075928--32075972
23
2.0
23
86
8
65
48
0
22
28
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32076096--32076159
23
2.8
23
90
2
103
20
15
20
43
1.87
32085685--32085801
23
4.6
23
84
10
117
17
4
33
45
1.68
32085681--32085787
28
4.0
28
82
9
134
19
3
30
45
1.68
32085992--32086036
22
2.0
23
95
4
83
17
17
22
42
1.89
32091435--32091497
33
1.9
32
87
9
92
39
0
6
53
1.26
32091439--32091519
33
2.5
33
82
11
87
46
0
6
46
1.27
32092061--32092105
23
2.0
23
86
8
65
48
0
22
28
1.50
32099465--32099500
10
3.7
10
85
7
56
77
0
0
22
0.76
32099466--32099504
14
3.0
14
85
14
57
76
0
0
23
0.78
32100587--32100679
28
3.4
28
88
4
127
20
16
6
56
1.61
32100587--32100679
14
6.7
14
75
2
89
20
16
6
56
1.61
32102344--32102407
21
2.9
22
79
6
76
40
25
18
15
1.90
32102344--32102409
23
3.0
23
80
6
91
40
24
19
15
1.90
32105492--32105758
63
4.2
63
77
4
180
32
30
7
29
1.84
32105554--32105815
63
4.2
63
79
1
220
35
31
6
26
1.82
32105589--32105828
126
1.9
126
79
1
266
34
32
6
26
1.82
32110976--32111051
11
6.2
12
75
21
61
43
0
1
55
1.08
32110989--32111092
31
3.2
31
67
19
84
40
0
4
53
1.28
32110976--32111051
6
12.5
6
69
22
52
43
0
1
55
1.08
32111016--32111071
25
2.2
25
84
12
71
41
1
7
50
1.40
32112175--32112262
42
2.1
43
87
6
126
35
27
17
20
1.94
32112742--32112845
23
4.5
23
85
0
145
43
20
1
34
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32116154--32116198
21
2.1
21
100
0
90
42
8
24
24
1.83
32116871--32117020
72
2.1
73
85
1
203
49
4
36
10
1.56
32116972--32117008
18
2.1
18
89
0
56
54
0
35
10
1.36
32117519--32117559
18
2.4
17
88
8
57
51
2
0
46
1.14
32117929--32118125
14
13.9
14
68
10
69
43
36
0
20
1.53
32117938--32118033
49
2.1
46
86
11
135
45
35
0
18
1.50
32117929--32118105
42
4.2
43
74
8
130
42
37
0
20
1.52
32118073--32118120
15
3.3
15
76
5
53
45
33
0
20
1.52
32118076--32118175
22
4.7
21
70
11
69
47
27
2
24
1.63
32118073--32118188
14
8.1
14
69
4
61
47
27
1
23
1.61
32118524--32118602
40
2.0
40
97
0
149
26
22
21
29
1.99
32118654--32118736
40
2.1
40
86
0
112
27
15
19
37
1.92
32123228--32123267
15
2.7
14
81
11
53
80
2
0
17
0.83
32124095--32124139
13
3.3
14
77
22
51
60
0
4
35
1.17
32125930--32125976
20
2.3
20
92
0
76
21
42
27
8
1.81
32128341--32128368
14
2.0
14
100
0
56
64
0
14
21
1.29
32132473--32132562
42
2.1
42
83
0
117
28
10
21
40
1.85
32133236--32133282
20
2.3
20
92
0
76
21
42
27
8
1.81
32135259--32135330
37
1.9
37
83
5
92
31
16
1
50
1.54
32148769--32148799
7
4.6
7
92
8
55
87
0
0
12
0.55
32148769--32148799
13
2.3
14
94
5
55
87
0
0
12
0.55
32155864--32155936
36
2.0
36
100
0
146
52
8
10
28
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32158273--32158317
22
2.2
20
92
8
72
22
20
11
46
1.81
32162962--32163065
40
2.6
40
82
0
127
22
24
17
36
1.94
32163104--32163148
20
2.2
20
84
0
54
13
22
15
48
1.79
32166257--32166299
23
1.9
23
86
13
63
46
6
4
41
1.51
32173345--32173382
17
2.2
17
90
0
58
31
7
2
57
1.41
32193409--32193582
46
3.8
46
77
11
185
28
28
21
21
1.98
32193416--32193586
93
1.8
92
92
1
288
28
28
21
21
1.99
32200991--32201162
93
1.8
93
93
0
299
28
29
20
20
1.98
32200992--32201159
46
3.6
46
76
13
182
29
29
20
20
1.98
32203097--32203135
17
2.3
17
86
0
60
58
2
7
30
1.39
32205941--32206116
46
3.8
46
79
12
216
20
21
29
28
1.98
32205938--32206109
93
1.8
93
96
0
317
20
21
29
27
1.98
32213461--32213635
46
3.8
45
80
11
212
20
21
29
29
1.98
32213458--32213628
92
1.9
92
96
0
315
21
21
29
28
1.98
32221902--32222025
63
2.0
63
90
0
194
29
23
19
28
1.98
32230507--32230542
19
1.9
19
88
5
56
41
11
5
41
1.64
32231542--32231571
11
2.7
11
100
0
60
60
10
0
30
1.30
32233113--32233153
21
2.0
21
85
4
57
41
17
26
14
1.88
32233174--32233294
60
2.0
60
90
0
188
35
18
21
24
1.95
32238662--32238707
11
4.3
11
81
13
51
50
0
4
45
1.21
32238776--32238806
16
1.9
16
93
0
53
51
0
0
48
1.00
32239181--32239617
216
2.0
216
98
0
847
32
23
14
29
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32248396--32248457
31
2.0
31
100
0
124
38
22
16
22
1.92
32250603--32250844
30
8.1
30
76
5
145
22
23
13
40
1.89
32250601--32250790
60
3.2
59
77
7
204
21
23
13
41
1.89
32250615--32250844
90
2.6
90
78
6
234
22
23
13
40
1.90
32250628--32250844
120
1.8
119
88
3
337
22
23
12
40
1.89
32250601--32250823
60
3.7
59
76
7
198
21
23
13
41
1.88
32252229--32252305
38
2.0
38
89
0
118
38
14
22
24
1.91
32265125--32265299
46
3.8
46
77
13
187
28
30
21
20
1.98
32265132--32265304
93
1.9
93
92
0
292
27
30
21
20
1.98
32267222--32267301
15
5.4
15
72
12
67
57
13
18
10
1.64

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332