Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  330  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108278652--108278718
29
2.3
29
87
5
91
19
1
47
31
1.58
108280957--108281033
31
2.4
33
78
8
86
33
10
9
46
1.70
108282989--108283019
15
2.1
15
100
0
62
0
32
6
61
1.21
108284053--108284115
31
2.0
31
81
6
74
26
4
6
61
1.40
108284272--108284337
18
3.2
23
60
28
56
54
4
12
28
1.57
108284258--108284345
39
2.3
39
96
3
162
50
4
12
32
1.61
108290127--108290176
17
2.7
20
78
18
70
10
0
44
46
1.37
108290840--108290895
21
2.7
21
82
0
76
32
35
7
25
1.83
108298503--108298879
200
1.9
194
84
7
501
26
11
15
46
1.79
108303929--108303953
12
2.1
12
100
0
50
16
0
8
76
1.02
108307355--108307530
94
1.9
95
91
4
293
40
17
15
26
1.89
108307551--108307825
107
2.5
110
88
2
394
37
21
14
26
1.92
108309418--108309471
26
2.1
26
96
0
99
57
7
7
27
1.53
108309902--108309926
3
8.3
3
100
0
50
36
0
0
64
0.94
108311722--108311782
9
6.8
9
96
0
104
22
9
29
37
1.87
108312038--108312077
13
2.9
14
85
11
55
30
0
5
65
1.14
108312027--108312093
23
3.0
21
79
16
66
29
0
2
67
1.06
108312040--108312088
15
3.4
14
83
11
55
32
0
4
63
1.13
108312890--108312937
23
2.2
22
85
10
64
27
6
4
62
1.38
108312894--108312953
23
2.9
21
82
9
61
23
10
3
63
1.40
108330202--108330234
18
1.9
17
88
11
50
30
0
6
63
1.18
108333634--108333677
10
4.8
9
84
13
54
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108333625--108333677
19
2.8
19
86
11
74
62
0
0
37
0.96
108335837--108335864
4
7.0
4
100
0
56
50
25
0
25
1.50
108337296--108337361
31
2.1
31
86
10
91
54
7
3
34
1.44
108345144--108345247
4
25.2
4
72
14
61
24
4
28
42
1.75
108346816--108346965
75
2.0
75
100
0
300
37
13
10
38
1.79
108347488--108347615
4
31.2
4
77
10
73
21
6
31
40
1.78
108351623--108351671
25
2.0
25
84
8
64
46
12
10
30
1.74
108351656--108351685
16
1.9
16
93
6
53
56
20
6
16
1.62
108352078--108352127
26
2.0
25
84
4
64
26
4
6
64
1.35
108352100--108352142
23
1.9
22
85
4
59
25
4
4
65
1.32
108363255--108363868
237
2.6
238
85
6
798
37
18
15
28
1.92
108372146--108372175
12
2.5
12
94
0
51
33
26
10
30
1.89
108383971--108384008
20
1.9
20
89
10
60
31
7
0
60
1.25
108388208--108388257
17
2.7
20
78
18
70
10
0
44
46
1.37
108392836--108392885
17
2.7
20
78
18
70
10
0
44
46
1.37
108395016--108395057
22
1.9
22
85
0
57
35
11
7
45
1.69
108396314--108396366
24
2.1
26
82
6
65
71
3
9
15
1.26
108398524--108398568
20
2.2
21
92
4
74
44
0
2
53
1.13
108404502--108404599
44
2.2
44
94
1
171
64
8
15
12
1.49
108404819--108404860
9
4.6
9
80
16
50
52
0
0
47
1.00
108412763--108413044
42
6.8
42
75
7
225
28
23
23
24
2.00
108412763--108412872
39
2.7
39
85
4
139
24
24
23
27
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108412763--108413044
84
3.4
83
79
5
266
28
23
23
24
2.00
108428363--108428473
59
1.9
58
81
9
136
35
18
10
36
1.85
108432241--108432267
9
3.0
9
100
0
54
55
0
0
44
0.99
108440504--108440546
21
2.1
20
95
4
77
23
25
20
30
1.99
108442387--108442416
15
1.9
16
93
6
53
16
13
6
63
1.50
108442703--108442753
24
2.1
25
81
3
59
17
15
9
56
1.65
108444461--108444558
43
2.3
43
96
0
178
27
10
12
50
1.72
108446940--108447007
31
2.2
31
81
5
84
44
11
13
30
1.79
108447627--108447651
6
4.2
6
100
0
50
16
52
0
32
1.44
108451293--108451343
26
2.0
26
92
0
84
25
5
19
49
1.71
108451318--108451708
141
2.9
130
84
7
448
27
12
20
39
1.89
108462127--108462158
16
2.0
17
88
11
50
43
0
0
56
0.99
108468879--108468930
18
3.0
18
81
10
56
51
0
3
44
1.19
108469167--108469206
16
2.5
17
84
11
50
55
35
5
5
1.44
108470323--108470357
15
2.3
15
95
0
61
34
8
0
57
1.29
108470323--108470355
12
2.8
12
95
0
57
33
9
0
57
1.30
108470323--108470369
15
3.1
15
90
0
58
34
10
0
55
1.35
108476419--108476581
83
2.0
84
95
1
292
42
21
8
26
1.81
108477851--108477957
56
1.9
56
100
0
214
29
8
23
38
1.84
108485961--108486020
29
2.0
29
84
9
77
38
20
5
36
1.74
108486546--108486577
6
5.3
6
100
0
64
15
0
31
53
1.43
108488025--108488103
10
8.1
10
71
19
60
62
3
1
32
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108488023--108488090
9
7.3
9
73
15
59
61
2
1
33
1.20
108488023--108488101
19
4.1
19
72
18
65
60
3
1
34
1.23
108488025--108488098
18
4.0
18
75
20
64
63
4
1
31
1.21
108504514--108504616
35
2.9
35
76
0
116
25
9
21
43
1.83
108510335--108510376
20
2.0
22
86
9
61
64
2
0
33
1.07
108514519--108514547
14
2.0
15
93
6
51
34
10
6
48
1.64
108522399--108522423
7
3.6
7
100
0
50
28
0
16
56
1.41
108525377--108525404
14
2.0
14
100
0
56
28
28
14
28
1.95
108530285--108530388
48
2.2
48
96
0
190
28
22
35
13
1.92
108534816--108534890
29
2.6
29
77
10
82
32
10
6
50
1.63
108539461--108539507
24
2.0
24
100
0
94
17
12
17
53
1.73
108539272--108539690
232
1.8
231
84
4
583
28
13
24
33
1.94
108539591--108540093
197
2.6
197
83
4
554
31
12
21
33
1.91
108541954--108541979
12
2.2
12
100
0
52
61
7
0
30
1.24
108551486--108551549
30
2.1
30
82
5
76
59
3
7
29
1.41
108553515--108553544
2
15.0
2
100
0
60
50
50
0
0
1.00
108555707--108555757
16
3.1
16
73
18
50
47
5
0
47
1.26
108558043--108558074
15
2.1
15
94
0
55
53
9
3
34
1.49
108565336--108565375
22
1.9
22
85
10
57
55
5
12
27
1.58
108566091--108566151
9
6.4
9
76
12
52
24
1
3
70
1.11
108566121--108566154
17
2.0
17
94
0
59
32
0
5
61
1.20
108566157--108566212
19
2.9
19
84
10
69
42
0
5
51
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108569518--108569573
25
2.2
25
100
0
112
50
14
5
30
1.65
108574900--108575014
60
1.9
61
85
1
160
24
16
12
46
1.81
108593923--108594723
205
4.0
205
81
7
895
31
22
16
28
1.96
108597734--108597790
29
1.9
29
85
3
78
42
3
24
29
1.71
108598124--108598364
50
4.7
50
82
7
263
26
23
29
20
1.99
108598128--108598372
100
2.4
103
83
8
313
26
23
28
21
1.99
108605287--108605344
30
1.9
30
89
0
89
41
3
24
31
1.71
108605556--108605587
13
2.5
13
94
0
55
31
0
12
56
1.37
108605682--108605923
50
4.7
50
86
4
297
26
24
29
19
1.99
108605682--108605931
100
2.4
103
88
6
364
26
24
29
20
1.99
108607856--108607900
21
2.1
21
84
8
56
66
2
0
31
1.04
108611417--108611451
17
2.1
17
100
0
70
51
25
0
22
1.48
108611709--108611746
19
2.0
20
89
5
60
31
5
5
57
1.43
108611992--108612042
18
2.8
18
87
0
66
15
43
31
9
1.80
108615472--108615499
14
2.0
14
100
0
56
50
42
0
7
1.30
108625875--108626443
176
3.2
175
81
5
648
40
17
11
29
1.86
108629999--108630058
30
2.0
30
96
0
111
45
10
16
28
1.80
108631850--108631899
20
2.5
20
76
0
55
54
0
2
44
1.11
108638796--108638822
14
1.9
14
100
0
54
55
7
0
37
1.28
108640880--108640931
13
4.0
12
77
22
52
59
0
3
36
1.16
108641134--108641174
21
2.0
21
85
9
57
36
7
0
56
1.27
108642941--108642980
20
2.0
20
100
0
80
65
5
0
30
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108652760--108652795
18
2.1
18
89
5
56
52
5
2
38
1.39
108653003--108653046
22
2.0
22
95
0
79
34
18
6
40
1.77
108660477--108660509
8
4.2
8
88
7
50
54
0
0
45
0.99
108663677--108663745
34
2.0
34
91
0
111
39
10
31
18
1.84
108667067--108667107
21
2.0
21
90
0
64
29
21
29
19
1.98
108671235--108671277
20
2.2
21
84
12
56
46
9
4
39
1.57
108673876--108673917
7
6.1
7
81
13
52
0
28
0
71
0.86
108676022--108676061
20
2.0
20
95
0
71
50
12
10
27
1.72
108676435--108676465
14
2.2
14
94
0
53
32
29
6
32
1.83
108679305--108679365
25
2.5
25
94
2
106
62
14
8
14
1.54

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332