Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  324  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106369289--106369521
75
3.2
72
82
7
263
31
17
18
32
1.95
106369501--106369535
14
2.5
14
95
0
61
17
22
5
54
1.64
106369445--106369663
89
2.5
87
84
6
269
28
18
18
34
1.95
106369445--106369673
90
2.6
89
83
6
284
28
18
19
33
1.95
106370408--106370490
26
3.2
25
94
3
139
33
4
25
36
1.77
106371672--106371704
8
4.1
8
100
0
66
39
24
24
12
1.89
106374801--106374855
16
3.4
15
85
12
65
30
7
7
54
1.55
106375074--106375169
22
4.4
22
76
18
76
29
7
5
58
1.47
106380545--106380689
45
3.2
45
75
1
139
29
22
21
26
1.99
106380829--106380936
26
4.2
26
97
0
198
37
25
6
30
1.81
106383598--106383669
32
2.4
29
76
13
74
36
6
2
54
1.42
106386377--106386571
99
2.0
99
97
0
372
35
15
15
32
1.90
106387667--106387743
37
2.1
37
97
0
145
42
15
9
32
1.78
106390674--106390715
21
2.0
21
85
0
57
38
9
7
45
1.64
106401182--106401263
26
3.2
26
94
0
146
37
25
4
31
1.77
106407954--106408035
26
3.2
26
98
0
155
37
26
4
30
1.77
106412967--106413396
87
4.9
86
79
7
427
28
17
19
34
1.94
106413286--106413319
14
2.4
14
95
0
59
17
17
5
58
1.57
106413294--106413492
103
1.9
105
87
2
294
24
18
18
38
1.93
106413417--106413815
86
4.4
88
79
13
393
26
17
18
38
1.92
106413212--106413769
189
2.9
190
90
3
820
25
17
18
38
1.92
106413566--106413592
14
1.9
14
100
0
54
22
18
7
51
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106413504--106413784
88
2.9
99
79
14
341
24
17
18
39
1.91
106413668--106413698
13
2.4
13
94
0
53
12
9
6
70
1.31
106413580--106413815
88
2.7
87
90
4
359
26
16
17
39
1.90
106416192--106416236
21
2.1
21
84
8
56
33
4
4
57
1.38
106416200--106416255
21
2.8
20
81
7
60
35
7
1
55
1.38
106416319--106416360
21
2.0
21
85
0
57
38
9
7
45
1.64
106420115--106420327
106
2.0
106
84
3
277
38
14
17
30
1.89
106426225--106426297
32
2.2
33
90
4
130
24
6
10
57
1.57
106427720--106427746
5
5.4
5
100
0
54
18
0
0
81
0.69
106432234--106432262
14
2.1
14
100
0
58
48
6
0
44
1.29
106432278--106432391
61
1.9
59
85
7
160
46
16
13
23
1.82
106433808--106433919
55
2.0
55
91
0
179
42
6
8
41
1.61
106435046--106435087
20
2.1
20
100
0
84
33
14
9
42
1.78
106436513--106436769
132
1.9
132
84
0
343
35
19
18
26
1.95
106437152--106437188
14
2.6
14
95
0
65
48
0
27
24
1.51
106440637--106440744
26
4.2
26
93
0
189
36
24
7
32
1.83
106445319--106445390
35
2.0
38
89
8
114
43
8
11
37
1.71
106447436--106447527
33
2.9
32
70
15
82
41
2
4
52
1.33
106450077--106450131
23
2.5
23
80
11
62
52
5
3
38
1.42
106450100--106450142
17
2.4
17
80
7
50
53
6
4
34
1.49
106450190--106450243
26
2.0
27
82
3
65
64
3
5
25
1.32
106450335--106450383
21
2.3
21
82
6
64
69
0
2
28
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106450591--106450633
23
1.9
22
90
4
68
48
0
11
39
1.40
106450662--106450702
14
2.9
14
82
17
57
58
7
0
34
1.26
106450820--106450873
23
2.3
24
87
9
76
53
11
0
35
1.36
106450820--106450864
21
2.1
21
88
12
65
53
11
0
35
1.37
106452543--106452946
88
4.6
87
80
6
406
36
19
16
28
1.93
106452840--106452874
14
2.5
14
95
0
61
57
2
20
20
1.54
106452865--106453385
73
7.1
73
93
0
873
31
23
15
30
1.95
106456011--106456046
16
2.2
16
95
0
63
66
0
8
25
1.19
106478071--106478123
26
2.0
27
85
7
74
24
15
22
37
1.92
106479611--106479718
26
4.2
26
97
0
207
36
26
6
30
1.82
106508975--106509036
15
4.0
16
81
10
67
14
1
0
83
0.71
106508975--106509042
23
2.8
25
80
14
88
16
1
0
82
0.75
106508975--106509041
11
5.7
11
80
18
73
14
1
0
83
0.72
106508975--106509042
16
4.3
15
85
9
91
16
1
0
82
0.75
106510000--106510212
118
1.8
118
94
0
381
22
16
31
29
1.96
106513576--106513726
42
3.6
39
79
13
151
17
19
18
44
1.87
106513665--106513733
21
3.3
21
75
0
66
15
23
18
42
1.89
106515999--106516041
22
2.0
20
82
8
50
55
4
9
30
1.52
106516232--106516306
19
4.3
18
76
10
75
60
1
4
34
1.24
106527323--106527360
19
2.0
19
85
10
51
26
15
5
52
1.64
106527360--106527392
13
2.5
13
90
9
50
24
6
6
63
1.40
106527467--106527636
3
57.7
3
66
8
80
30
8
2
58
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106527562--106527601
20
2.0
20
85
0
53
27
10
7
55
1.60
106527601--106527664
23
2.8
22
76
9
65
25
6
4
64
1.37
106527806--106527980
6
29.0
6
67
18
62
29
8
2
59
1.39
106530352--106530440
46
1.9
46
97
0
169
41
8
10
39
1.70
106532293--106532335
18
2.3
18
88
11
61
37
13
25
23
1.92
106535081--106535123
21
2.0
21
100
0
86
13
32
9
44
1.76
106536500--106536539
3
13.3
3
83
0
53
62
2
2
32
1.22
106536491--106536521
12
2.6
12
94
0
53
61
3
6
29
1.37
106536491--106536679
18
10.1
18
65
19
55
56
3
11
29
1.51
106537634--106537664
16
1.9
16
93
0
53
74
0
25
0
0.82
106538042--106538191
77
2.0
76
92
4
248
34
14
20
31
1.92
106541356--106541386
15
2.1
15
100
0
62
67
6
0
25
1.14
106545802--106545911
56
2.0
56
92
0
184
42
10
8
39
1.68
106549661--106549707
24
2.0
24
82
0
58
70
2
17
10
1.26
106555567--106555604
6
6.5
6
87
3
51
2
21
31
44
1.66
106555547--106555613
27
2.5
27
80
9
75
4
17
32
44
1.69
106555582--106555621
15
2.7
15
84
0
53
7
22
32
37
1.82
106556221--106556278
30
1.9
30
89
0
89
50
10
10
29
1.70
106557283--106557459
15
13.0
14
77
13
110
0
17
34
48
1.48
106557294--106557450
6
26.2
6
82
0
98
0
17
33
48
1.48
106557296--106557465
12
14.2
12
85
7
175
0
16
33
50
1.46
106557294--106557462
39
4.6
38
82
10
217
0
17
33
49
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106557296--106557462
9
17.2
9
76
14
136
0
16
33
49
1.46
106557503--106557561
6
9.8
6
84
0
55
5
15
35
44
1.68
106557509--106557569
9
6.8
9
73
0
50
4
16
34
44
1.69
106557503--106557569
12
5.8
12
75
6
50
4
16
34
44
1.68
106558527--106558562
18
2.0
18
100
0
72
22
22
16
38
1.93
106559555--106559592
20
1.9
20
88
0
58
2
5
5
86
0.76
106559552--106559596
21
2.0
23
87
8
67
2
4
8
84
0.84
106563133--106563223
31
3.0
30
79
4
101
41
12
12
34
1.79
106568315--106568377
24
2.6
25
89
5
110
34
0
3
61
1.12
106573390--106573427
19
2.0
19
85
10
51
50
7
13
28
1.69
106574158--106574191
15
2.3
15
94
0
59
55
2
11
29
1.50
106577822--106577863
18
2.5
18
81
11
54
33
0
4
61
1.17
106589543--106589596
27
2.0
27
100
0
108
33
14
18
33
1.92
106594717--106594778
29
2.1
29
85
5
81
53
3
6
37
1.43
106596373--106596406
8
4.2
8
100
0
68
23
11
0
64
1.26
106599146--106599174
14
2.1
14
100
0
58
79
0
6
13
0.93
106606640--106606677
19
2.0
19
85
10
51
18
13
13
55
1.69
106608360--106608416
9
6.3
9
78
8
62
24
22
33
19
1.97
106627585--106627641
30
1.9
30
88
0
87
49
14
8
28
1.72
106629434--106629479
19
2.5
19
79
13
51
65
0
6
28
1.17
106629714--106629773
28
2.1
30
84
12
81
61
0
5
33
1.17
106629714--106629789
30
2.6
32
76
23
78
60
0
6
32
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106629805--106629877
7
10.9
7
72
17
57
58
0
0
41
0.98
106629804--106629937
17
8.4
17
68
25
71
61
0
2
35
1.17
106629804--106629868
12
5.7
12
77
10
57
58
0
0
41
0.98
106629842--106629898
24
2.4
25
82
8
66
59
0
3
36
1.14
106633333--106633505
53
3.5
48
75
13
149
25
15
28
30
1.96
106637579--106637613
6
5.8
6
86
0
52
31
0
54
14
1.40
106644825--106644877
26
2.1
24
83
16
63
73
1
0
24
0.93
106646350--106646386
16
2.3
16
90
0
56
54
0
5
40
1.24
106655675--106655750
25
3.4
23
81
13
79
69
5
0
25
1.09
106655712--106655750
19
2.0
20
95
5
71
71
5
0
23
1.05

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332