Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  196  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65258970--65259067
29
3.5
28
80
13
96
26
13
28
31
1.94
65267107--65267204
27
3.5
28
90
2
135
26
13
28
31
1.94
65267135--65267217
27
3.0
27
87
5
96
30
12
25
32
1.92
65267107--65267218
28
4.0
27
83
6
98
28
12
25
33
1.92
65272146--65272207
32
1.9
32
87
6
90
43
12
8
35
1.73
65272963--65273014
26
2.0
25
82
10
61
50
1
0
48
1.12
65272964--65273074
58
1.9
57
83
5
143
43
1
2
52
1.26
65273236--65273307
16
4.5
16
85
3
92
29
26
8
36
1.86
65287989--65288087
42
2.3
43
80
5
110
31
18
21
29
1.97
65288018--65288086
21
3.3
20
74
22
61
30
20
21
27
1.98
65288758--65288813
27
2.1
27
82
0
67
44
16
19
19
1.87
65291084--65291128
22
2.0
22
95
0
81
33
15
24
26
1.95
65300387--65300853
228
2.1
227
88
0
691
25
28
24
22
1.99
65305363--65305404
21
2.0
21
100
0
84
52
9
14
23
1.71
65309229--65309724
96
5.4
93
72
13
362
31
2
9
56
1.43
65309223--65309354
48
2.7
50
74
15
125
34
1
7
56
1.37
65309462--65309623
80
2.0
81
84
3
211
31
1
9
56
1.42
65309373--65309810
176
2.5
174
85
3
578
32
2
10
54
1.47
65309556--65309725
49
3.5
48
75
8
175
30
1
11
57
1.44
65309660--65309823
77
2.1
73
79
14
186
31
1
10
56
1.43
65316483--65316910
50
8.8
48
70
10
240
28
19
28
24
1.98
65316487--65316910
98
4.4
96
75
13
308
28
19
28
24
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65320684--65320936
130
2.0
126
83
4
319
39
7
16
35
1.78
65321581--65321628
22
2.3
21
75
7
53
27
6
2
64
1.28
65325095--65325157
6
10.5
6
77
14
51
20
1
0
77
0.85
65325103--65325152
12
3.9
13
82
12
68
24
0
0
76
0.80
65325093--65325151
24
2.5
24
86
5
84
23
0
0
76
0.79
65325104--65325152
14
3.8
14
79
17
52
24
0
0
75
0.80
65331499--65331545
16
3.1
16
77
22
57
25
0
0
74
0.82
65331499--65331543
22
2.1
22
88
8
67
24
0
0
75
0.80
65331501--65331590
3
31.0
3
75
14
73
26
2
3
67
1.17
65333205--65333265
6
9.8
6
72
13
52
16
3
4
75
1.11
65333193--65333236
12
3.8
11
84
6
52
18
4
0
77
0.94
65334005--65334060
26
2.2
26
96
0
103
25
32
14
28
1.94
65340971--65341005
16
2.1
17
89
5
54
25
5
0
68
1.11
65345334--65345375
22
1.9
23
85
9
61
69
7
9
14
1.37
65346033--65346067
16
2.2
16
89
0
52
65
5
2
25
1.28
65346211--65346250
19
2.1
19
90
0
62
70
5
5
20
1.26
65349138--65349182
14
3.2
14
87
0
54
26
13
6
53
1.64
65350161--65350212
24
2.2
24
89
0
77
34
3
7
53
1.48
65351201--65351225
13
1.9
13
100
0
50
24
0
0
76
0.80
65351178--65351263
34
2.5
33
81
7
91
30
4
2
62
1.28
65352688--65352781
40
2.4
39
80
5
109
37
36
12
13
1.84
65353133--65353166
13
2.6
13
95
0
59
2
44
29
23
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65354987--65355018
16
2.1
16
88
11
50
15
6
3
75
1.14
65357739--65357777
19
2.1
19
85
9
53
41
7
5
46
1.55
65368603--65368672
27
2.6
26
95
2
95
31
28
12
27
1.93
65368603--65368700
28
3.5
28
90
2
135
31
28
13
26
1.94
65369147--65369173
12
2.2
12
100
0
54
40
0
7
51
1.30
65371514--65371734
47
4.8
46
83
10
197
22
20
28
28
1.99
65371561--65371683
47
2.6
47
100
0
246
23
20
27
28
1.99
65375449--65375502
27
2.0
27
100
0
108
29
37
14
18
1.91
65375955--65375993
19
2.0
20
90
5
62
20
0
7
71
1.10
65375974--65376019
25
1.9
23
86
8
65
28
0
8
63
1.24
65379388--65379503
57
2.1
56
98
1
223
29
15
12
42
1.84
65380036--65380077
22
1.9
22
85
0
57
45
0
7
47
1.30
65394438--65394528
46
2.0
46
93
0
155
51
16
7
24
1.70
65394837--65394886
3
16.7
3
82
0
55
4
32
4
60
1.34
65395538--65395584
22
2.1
23
84
4
60
53
0
2
44
1.12
65406682--65406707
12
2.2
12
100
0
52
53
7
7
30
1.57
65407609--65407654
6
7.5
6
80
4
56
78
0
15
6
0.95
65407609--65407654
18
2.5
19
89
3
67
78
0
15
6
0.95
65410793--65410860
33
2.1
33
86
5
93
29
14
23
32
1.94
65412508--65412597
42
2.2
42
80
5
96
16
23
17
42
1.89
65417687--65417801
30
3.8
30
94
0
185
44
6
22
26
1.76
65417701--65417801
15
6.7
15
70
13
82
42
6
22
27
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65422376--65422490
30
3.8
30
94
0
185
44
6
22
26
1.76
65422390--65422490
15
6.7
15
70
13
82
42
6
22
27
1.79
65427375--65427420
23
2.0
23
100
0
92
39
0
8
52
1.33
65439513--65439571
26
2.1
28
81
9
68
49
5
1
44
1.34
65445705--65445746
6
7.0
6
88
0
66
52
0
2
45
1.13
65447680--65447710
12
2.5
13
94
5
55
67
6
3
22
1.28
65447930--65448004
24
3.0
26
82
11
102
56
6
13
24
1.61
65455686--65455830
27
5.4
27
87
4
195
37
22
23
16
1.94
65455686--65455851
54
3.1
54
88
3
237
37
22
22
16
1.94
65455686--65455851
27
6.1
27
75
7
140
37
22
22
16
1.94
65457441--65457550
26
4.2
26
97
0
184
36
24
5
33
1.79
65461495--65461659
27
6.2
27
86
5
212
35
22
23
18
1.95
65461495--65461659
54
3.1
53
89
5
244
35
22
23
18
1.95
65463229--65463338
26
4.2
26
97
0
184
36
24
5
33
1.79
65465415--65465496
26
3.2
26
92
0
146
35
24
7
32
1.83
65483104--65483199
39
2.5
39
91
0
147
29
3
22
44
1.68
65491118--65491152
17
2.1
17
88
0
52
34
5
20
40
1.76
65494885--65495570
47
14.5
47
94
2
1176
32
9
29
29
1.88
65495689--65495767
37
2.1
37
90
0
122
24
18
31
25
1.98
65501960--65501984
13
1.9
13
100
0
50
32
4
24
40
1.73
65506927--65506993
33
2.0
33
97
0
125
32
13
11
41
1.81
65507691--65507719
14
2.0
15
93
6
51
27
0
20
51
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65508233--65508263
15
2.1
15
93
0
53
19
0
25
54
1.44
65508811--65509032
45
5.0
44
84
3
243
23
16
26
33
1.95
65508811--65509032
89
2.5
88
83
2
250
23
16
26
33
1.95
65519501--65519529
14
2.0
15
93
6
51
27
0
20
51
1.47
65520045--65520074
15
2.0
15
93
0
51
20
3
20
56
1.56
65520651--65520696
23
2.0
23
91
0
74
26
17
30
26
1.97
65524065--65524164
45
2.2
45
94
0
173
21
15
29
35
1.93
65527938--65527962
13
1.9
13
100
0
50
32
4
24
40
1.73
65528971--65529124
43
3.6
44
77
12
176
22
17
27
32
1.96
65534015--65534077
30
2.1
30
100
0
126
36
23
6
33
1.80
65535294--65535375
5
16.0
5
81
13
73
75
1
6
17
1.06
65535298--65535360
17
3.9
16
77
12
58
74
1
7
15
1.12
65535306--65535365
25
2.3
26
91
5
95
75
1
6
16
1.10
65535300--65535375
31
2.5
29
87
10
100
76
1
5
17
1.04
65540617--65540642
13
2.0
13
100
0
52
46
7
0
46
1.31
65541945--65542063
60
2.0
60
93
0
202
39
17
27
15
1.90
65542031--65542295
40
6.7
40
83
2
311
37
16
29
16
1.91
65541932--65542295
20
18.2
20
66
13
135
38
16
28
16
1.91
65541945--65542106
60
2.7
60
81
7
168
37
16
29
16
1.90
65542030--65542299
119
2.3
119
84
7
357
37
16
29
17
1.91
65544937--65545204
104
2.6
105
92
1
432
29
30
20
19
1.97
65545528--65545591
30
2.2
29
81
10
76
29
28
6
35
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65545535--65545591
30
1.9
30
85
3
80
29
24
7
38
1.82
65552412--65552678
104
2.6
104
93
1
455
29
30
20
18
1.97
65553005--65553067
29
2.2
29
81
13
76
30
26
6
36
1.81
65553012--65553067
29
1.9
30
85
7
80
30
23
7
39
1.81
65561876--65561923
18
2.7
18
90
0
69
37
6
39
16
1.74
65569859--65569975
61
1.9
61
87
3
173
27
32
18
21
1.97
65574538--65574579
19
2.1
21
91
8
70
47
14
0
38
1.44
65579201--65579270
37
1.9
36
88
2
104
25
22
17
34
1.96
65599347--65599385
19
2.0
20
85
5
53
17
15
33
33
1.92
65606764--65606935
40
4.3
40
84
5
215
24
21
26
27
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332