Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A13
Parameters: 2 7 7 80 10 50 1000
Length:  109233746

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   

This is table  155  of  332  ( 39766 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50868173--50868320
45
3.3
44
67
7
111
29
18
22
29
1.97
50868475--50868669
64
3.0
62
89
4
282
37
14
18
29
1.90
50869717--50869766
20
2.4
21
83
3
66
12
10
0
78
0.98
50869717--50869773
20
2.8
19
79
12
60
10
8
1
78
1.02
50872769--50873030
40
6.6
39
85
4
276
25
27
21
25
1.99
50872734--50873030
80
3.8
79
80
5
282
24
27
21
26
1.99
50872962--50873039
40
1.9
41
82
10
97
26
28
20
24
1.99
50880720--50880942
39
5.7
40
82
8
242
25
27
21
25
1.99
50880874--50880951
40
1.9
41
82
10
97
26
28
20
24
1.99
50887112--50887147
16
2.3
16
90
4
56
0
11
8
80
0.90
50887986--50888118
23
5.8
22
75
11
92
33
16
21
27
1.95
50891001--50891065
27
2.5
26
92
2
103
43
3
3
50
1.33
50894829--50894896
35
1.9
35
100
0
136
26
11
14
47
1.79
50895252--50895437
58
3.2
58
80
9
200
27
27
13
31
1.94
50909195--50909346
27
5.6
27
93
3
241
26
13
28
30
1.94
50909195--50909346
55
2.8
55
94
0
259
26
13
28
30
1.94
50917243--50917394
27
5.6
27
93
3
241
26
13
28
30
1.94
50917243--50917394
55
2.8
55
94
0
259
26
13
28
30
1.94
50924191--50924261
17
4.1
17
83
3
79
53
4
1
40
1.29
50924594--50924728
4
33.5
4
68
10
53
63
0
10
25
1.26
50924619--50924737
53
2.3
53
78
7
129
64
0
10
25
1.24
50924669--50924736
16
4.5
15
74
9
57
67
0
8
23
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50929556--50929625
30
2.3
30
90
0
104
21
37
22
18
1.94
50930308--50930431
45
2.8
43
85
3
149
29
18
20
31
1.97
50930308--50930467
44
3.6
44
83
7
159
28
19
21
30
1.98
50937308--50937360
25
2.1
25
89
0
79
22
33
32
11
1.90
50944423--50944451
12
2.3
13
94
5
51
58
13
6
20
1.58
50945208--50945318
42
2.6
42
81
5
134
28
18
25
27
1.98
50946751--50947524
385
2.0
385
97
0
1476
25
20
23
30
1.99
50950621--50950650
14
2.1
14
93
0
51
60
6
3
30
1.39
50950724--50950761
18
2.1
18
85
9
51
23
2
2
71
1.12
50950877--50950930
16
3.4
16
84
0
72
38
7
25
27
1.83
50950913--50951006
44
2.1
46
90
4
147
34
6
26
32
1.82
50951077--50951127
26
2.0
26
88
3
77
41
0
7
50
1.31
50951191--50951289
12
8.4
12
76
14
84
49
1
0
49
1.07
50951167--50951292
23
5.6
22
75
22
72
51
1
0
46
1.10
50951221--50951300
36
2.2
36
97
0
151
51
0
0
48
1.00
50951244--50951296
12
4.3
13
68
22
51
52
0
0
47
1.00
50951427--50951467
14
3.1
14
79
10
50
58
0
0
41
0.98
50951423--50951558
58
2.3
58
83
2
184
53
2
0
42
1.21
50951678--50951803
62
2.0
62
100
0
252
51
9
7
30
1.63
50959849--50959878
15
1.9
16
93
6
53
26
0
0
73
0.84
50969859--50969919
28
2.2
28
80
8
72
59
1
1
37
1.17
50977727--50977887
43
3.8
42
82
2
198
31
25
14
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50980379--50980408
15
2.1
15
93
6
53
60
0
0
40
0.97
50980316--50980521
61
3.3
63
91
4
330
40
4
6
49
1.48
50980455--50980558
50
2.1
49
87
7
149
37
4
6
50
1.50
50984886--50985021
44
2.8
50
75
15
140
31
27
18
22
1.97
50984993--50985114
45
2.7
44
78
7
138
31
27
14
26
1.95
50986010--50986070
28
2.2
28
90
0
95
31
36
6
26
1.82
50996859--50996899
17
2.4
17
87
0
55
19
4
0
75
0.98
50999781--50999808
13
2.2
13
100
0
56
32
0
14
53
1.41
51003830--51003861
16
2.1
15
94
5
55
25
25
18
31
1.98
51006022--51006082
30
2.0
30
90
0
95
39
6
24
29
1.80
51015181--51015263
39
2.1
39
93
0
139
39
22
7
30
1.81
51020480--51020521
22
1.9
22
85
0
57
69
4
0
26
1.08
51020843--51020875
17
1.9
17
88
11
50
66
6
3
24
1.28
51021260--51021305
23
2.0
23
95
0
83
54
13
0
32
1.39
51022087--51022157
33
2.2
33
89
5
108
26
23
25
23
2.00
51023591--51023620
6
5.0
6
100
0
60
16
0
50
33
1.46
51025916--51025993
36
2.2
36
90
0
120
14
17
41
26
1.88
51029399--51029519
48
2.5
48
86
0
170
28
28
19
23
1.98
51031172--51031321
41
3.7
41
80
1
185
20
21
27
30
1.98
51039402--51039551
41
3.7
41
83
1
212
21
23
27
28
1.99
51043488--51043708
38
5.7
38
76
3
192
34
29
19
16
1.94
51043492--51043708
76
2.8
76
78
7
215
34
29
18
17
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51045254--51045328
36
2.1
35
95
2
132
41
22
8
28
1.82
51046583--51046612
15
2.0
15
93
0
51
76
6
3
13
1.11
51047165--51047192
3
9.3
3
100
0
56
67
0
0
32
0.91
51072573--51072602
15
1.9
16
93
6
53
56
6
0
36
1.26
51072625--51072752
67
1.9
68
82
4
161
46
7
4
41
1.52
51072733--51072778
18
2.5
19
82
13
60
54
0
2
43
1.12
51078739--51078869
46
2.8
46
87
5
176
19
19
27
32
1.97
51083654--51083712
30
2.0
29
86
3
82
37
18
15
28
1.91
51089724--51089783
30
2.0
30
93
0
102
43
10
6
40
1.64
51091494--51091547
14
3.7
15
80
14
69
25
0
3
70
1.04
51104271--51104452
40
4.6
40
88
2
242
24
21
25
29
1.99
51122726--51122867
68
2.1
68
81
0
158
31
11
40
16
1.84
51123049--51123099
26
1.9
27
92
4
86
74
0
23
1
0.92
51128144--51128189
19
2.5
18
85
3
56
52
0
21
26
1.47
51128404--51128649
43
5.7
43
87
0
314
23
27
23
26
2.00
51128404--51128641
129
1.8
129
87
1
352
23
27
23
26
2.00
51128824--51128955
68
1.9
68
96
0
246
35
11
18
34
1.87
51134643--51134714
9
8.0
9
72
6
65
34
2
18
44
1.64
51134643--51134754
45
2.5
46
85
8
158
34
3
16
44
1.66
51135415--51135515
41
2.5
41
93
0
166
62
2
10
23
1.42
51137605--51137706
41
2.5
41
84
6
134
27
26
13
32
1.94
51143256--51143527
43
6.3
43
81
4
289
33
22
17
26
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51143255--51143528
130
2.1
128
87
2
397
33
22
17
26
1.96
51143256--51143527
87
3.2
85
83
7
311
33
22
17
26
1.96
51143825--51143872
21
2.3
21
88
0
69
0
52
18
29
1.46
51144428--51144465
19
2.1
18
85
9
51
52
0
7
39
1.31
51149739--51149778
21
1.9
21
94
0
71
47
12
10
30
1.74
51151756--51151795
19
2.0
20
90
4
64
47
20
15
17
1.83
51153687--51153725
19
2.1
19
90
4
62
48
2
2
46
1.29
51154745--51155045
41
7.4
41
90
1
417
20
22
23
32
1.98
51155050--51155075
12
2.2
12
100
0
52
46
30
15
7
1.74
51164067--51164124
17
3.3
17
81
13
73
65
1
0
32
1.03
51164068--51164144
19
4.1
19
76
15
72
66
1
1
31
1.08
51164009--51164256
9
26.7
9
65
18
80
59
2
2
34
1.26
51164009--51164149
28
5.0
26
72
14
86
60
2
2
34
1.23
51164168--51164216
19
2.6
19
100
0
98
57
4
4
34
1.37
51164168--51164227
19
3.2
19
92
2
86
60
3
3
33
1.30
51164660--51164732
9
7.9
9
80
7
67
30
1
4
64
1.20
51164664--51164732
29
2.5
28
79
9
79
31
1
4
62
1.24
51164668--51164754
20
4.6
19
71
19
58
33
2
4
59
1.30
51164670--51164754
37
2.2
37
79
8
91
32
2
4
60
1.30
51164766--51164839
10
7.6
10
70
10
55
29
2
2
64
1.21
51164824--51164872
25
1.9
26
87
4
73
28
2
0
69
1.00
51166993--51167042
17
2.7
20
78
18
70
10
0
44
46
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51171631--51171680
17
2.7
20
78
18
70
10
0
44
46
1.37
51173771--51173798
14
2.0
14
100
0
56
50
14
21
14
1.78
51177198--51177244
22
2.1
23
84
4
60
59
10
6
23
1.53
51179778--51179891
57
2.0
57
100
0
228
43
8
31
15
1.78
51185963--51186003
21
2.0
21
85
0
55
46
0
17
36
1.48
51204043--51204107
21
3.0
21
78
10
69
66
3
24
6
1.29
51204138--51204173
9
4.0
9
89
10
56
33
0
0
66
0.92
51205795--51205840
13
3.4
14
85
8
60
52
0
0
47
1.00
51205799--51205838
14
2.8
16
78
21
52
47
0
0
52
1.00
51205870--51205919
26
2.0
26
84
4
66
46
2
2
50
1.24

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332