Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A03
Parameters: 2 7 7 80 10 50 1000
Length:  105315579

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   

This is table  102  of  325  ( 38900 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32691454--32691514
26
2.4
25
80
2
68
60
4
4
29
1.38
32691393--32691607
25
9.0
25
71
13
125
56
3
6
33
1.41
32691560--32691604
20
2.2
20
84
7
56
60
0
4
35
1.17
32692096--32692269
30
5.8
30
93
1
296
22
3
49
24
1.65
32692096--32692269
59
2.9
59
95
1
312
22
3
49
24
1.65
32692096--32692269
89
1.9
90
92
1
296
22
3
49
24
1.65
32692957--32693007
14
3.6
14
77
12
50
64
3
11
19
1.41
32692987--32694015
73
13.3
74
72
15
640
34
20
16
28
1.94
32693219--32693246
14
2.0
14
100
0
56
57
7
21
14
1.61
32693136--32693304
93
1.8
92
88
3
259
36
19
15
28
1.92
32692979--32693922
241
4.0
239
92
2
1528
34
20
16
28
1.95
32693457--32693484
14
2.0
14
100
0
56
57
7
21
14
1.61
32693309--32693611
163
1.9
159
88
4
455
33
21
16
28
1.95
32702073--32702103
12
2.6
12
100
0
62
41
6
25
25
1.79
32703638--32703685
16
3.1
15
90
6
69
64
2
2
31
1.16
32703634--32703689
24
2.3
24
81
6
69
66
1
1
30
1.12
32703634--32703685
8
6.5
8
82
8
61
65
1
1
30
1.14
32703837--32703901
25
2.8
24
83
6
80
52
6
7
33
1.55
32703831--32704034
49
4.0
49
72
14
130
55
3
5
35
1.41
32703923--32704051
24
5.5
25
68
18
71
58
2
3
35
1.29
32704541--32704653
30
3.8
30
93
0
199
21
3
49
25
1.65
32705773--32705813
20
2.0
20
85
0
55
34
4
4
56
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32707764--32707819
29
1.9
29
81
0
67
48
10
5
35
1.61
32708556--32708642
42
2.1
42
97
0
165
33
22
8
35
1.84
32710769--32710807
21
1.9
19
85
10
51
74
2
5
17
1.12
32715504--32715764
47
5.6
45
71
14
199
27
18
30
23
1.98
32715504--32715769
94
2.8
94
77
13
280
27
19
30
23
1.98
32719083--32719131
21
2.3
21
83
16
66
61
0
0
38
0.96
32719662--32719717
24
2.2
24
81
12
60
46
0
0
53
1.00
32730079--32730125
20
2.3
20
92
7
78
36
10
19
34
1.86
32730173--32730268
25
3.8
26
84
5
135
25
23
22
28
2.00
32730173--32730281
51
2.2
49
90
6
166
27
22
22
27
1.99
32730491--32730554
31
2.1
31
84
0
83
39
12
21
26
1.89
32730541--32730568
7
4.0
7
100
0
56
57
0
14
28
1.38
32742244--32742293
9
5.8
9
74
9
50
50
0
2
48
1.12
32742244--32742293
26
1.9
26
95
0
91
50
0
2
48
1.12
32745217--32745273
20
2.8
20
89
0
78
49
0
29
21
1.50
32751431--32751599
48
3.6
48
83
3
234
28
20
27
23
1.98
32751437--32751746
49
6.5
49
74
11
155
28
20
27
23
1.99
32751484--32751791
142
2.2
142
82
6
367
28
19
26
25
1.99
32756306--32756330
3
8.3
3
100
0
50
68
0
0
32
0.90
32757927--32757953
13
2.1
13
100
0
54
29
0
22
48
1.51
32759041--32759171
42
3.0
42
82
10
133
22
18
23
35
1.96
32759071--32759205
43
3.1
43
79
11
118
25
19
22
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32759732--32759777
23
2.0
24
82
4
58
17
2
26
54
1.54
32764436--32764748
46
6.6
46
72
10
211
28
18
29
23
1.98
32764439--32764748
94
3.3
93
80
7
302
28
18
29
23
1.98
32764575--32764750
49
3.6
47
80
11
196
28
20
28
22
1.99
32767732--32767919
94
2.0
94
95
0
340
35
16
14
32
1.90
32781929--32781979
19
2.9
17
83
11
66
37
9
17
35
1.83
32781951--32782008
22
2.7
21
86
7
80
34
3
18
43
1.68
32797448--32797792
171
2.0
172
89
2
532
39
13
10
37
1.78
32799250--32799283
5
6.8
5
93
0
59
0
2
17
79
0.86
32800302--32800370
28
2.4
29
85
2
95
23
13
33
30
1.92
32803920--32803951
16
2.0
16
93
0
55
43
15
25
15
1.86
32804174--32804264
29
3.2
29
79
11
100
24
14
32
28
1.94
32808066--32808156
28
3.2
28
83
9
105
24
15
31
28
1.95
32811711--32811736
10
2.6
10
100
0
52
61
0
38
0
0.96
32818920--32819031
43
2.6
42
81
5
136
19
16
31
33
1.94
32818953--32819034
43
1.9
43
92
0
137
21
17
30
30
1.96
32826178--32826480
47
6.4
47
90
3
416
33
9
30
27
1.88
32826184--32826459
93
2.9
93
88
3
401
31
10
30
26
1.90
32826189--32826459
140
1.9
142
88
5
415
31
10
31
26
1.90
32826178--32826480
140
2.1
141
84
8
409
33
9
30
27
1.88
32830904--32831008
43
2.5
43
82
4
124
18
17
32
32
1.94
32833366--32833410
19
2.4
19
85
7
56
57
8
0
33
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32833457--32833489
17
1.9
17
100
0
66
69
6
0
24
1.10
32833745--32833791
15
3.2
15
79
11
53
70
2
0
27
0.99
32837649--32837714
31
2.1
31
97
0
123
39
27
6
27
1.80
32837863--32838032
91
1.8
93
83
6
229
22
29
20
28
1.98
32842341--32842614
39
7.1
39
91
1
453
23
29
24
21
1.99
32846943--32847207
47
5.7
46
75
13
197
22
29
20
27
1.98
32846991--32847210
46
4.7
46
79
6
212
23
29
20
27
1.98
32847037--32847214
94
1.9
92
89
2
275
23
30
20
25
1.98
32846943--32847207
140
1.9
141
82
6
342
22
29
20
27
1.98
32853448--32853711
47
5.6
47
79
11
213
23
28
19
28
1.99
32860590--32860617
3
9.3
3
100
0
56
35
0
0
64
0.94
32862705--32862753
25
2.0
25
87
0
71
36
22
14
26
1.92
32862884--32862954
26
2.8
25
89
4
115
25
25
22
26
2.00
32863174--32863277
31
3.4
31
95
0
190
35
16
25
23
1.95
32864699--32864820
43
2.8
44
80
9
137
31
27
19
21
1.97
32869123--32869277
23
6.8
23
70
10
120
35
16
21
27
1.94
32869191--32869289
46
2.2
46
84
0
126
34
16
22
27
1.95
32872034--32872248
46
4.7
46
76
11
149
24
29
17
28
1.97
32872082--32872253
46
3.7
44
81
10
157
23
29
18
28
1.98
32875626--32875788
43
3.8
43
77
8
154
30
15
24
29
1.96
32879396--32879441
24
1.9
24
82
8
58
36
17
26
19
1.94
32881398--32881425
14
2.0
14
100
0
56
21
14
21
42
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32886451--32886608
40
4.0
40
94
0
262
23
22
27
26
1.99
32894104--32894287
40
4.6
40
91
0
296
23
21
27
28
1.99
32894104--32894320
40
5.4
40
88
0
283
24
21
26
27
1.99
32896918--32897104
48
3.9
48
80
6
209
27
18
27
26
1.98
32896919--32897103
96
1.9
96
89
4
284
27
18
27
26
1.98
32896927--32897152
96
2.4
95
81
10
248
29
18
27
24
1.98
32903750--32903819
26
2.8
26
89
4
99
27
28
18
25
1.98
32903752--32903835
26
3.4
24
83
6
71
29
23
19
27
1.98
32925524--32925902
47
8.1
47
92
0
571
33
11
28
26
1.91
32925876--32925966
46
2.0
46
88
0
137
34
8
30
26
1.87
32929443--32929618
46
3.8
45
79
10
203
20
21
29
28
1.98
32929439--32929610
93
1.8
93
93
0
299
20
21
30
27
1.98
32933872--32933968
12
8.5
11
69
22
58
58
1
4
36
1.24
32933901--32933969
33
2.1
32
81
7
77
59
1
4
34
1.26
32934474--32934501
11
2.5
11
100
0
56
89
0
10
0
0.49
32945339--32945384
5
10.0
5
77
17
55
39
2
0
58
1.10
32945342--32945383
13
3.2
13
86
6
59
38
2
0
59
1.10
32945339--32945384
18
2.6
18
92
0
83
39
2
0
58
1.10
32953037--32953201
48
3.5
48
78
4
163
32
18
24
24
1.97
32957378--32957409
16
2.0
16
93
0
55
31
34
0
34
1.58
32961093--32961133
22
1.9
21
85
5
55
17
24
43
14
1.86
32964579--32964756
40
4.5
40
87
2
243
25
27
23
23
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32972589--32972805
40
5.5
40
88
3
298
25
28
23
22
1.99
32972589--32972805
119
1.8
119
87
4
321
25
28
23
22
1.99
32975162--32975222
30
2.0
30
83
0
77
31
22
8
37
1.84
32976862--32977195
164
2.0
164
98
0
641
35
27
12
24
1.91
32979235--32979375
49
2.8
50
82
2
185
21
28
19
29
1.98
32982089--32982149
30
2.0
30
83
0
77
31
22
8
37
1.84
32985757--32985790
14
2.4
14
95
0
59
52
20
2
23
1.60
32985548--32986022
239
2.0
239
99
0
941
36
18
7
38
1.79
32986923--32987103
46
3.9
46
77
12
174
25
27
17
29
1.98
32986934--32987106
94
1.9
92
83
9
226
25
27
17
28
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325