Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A03
Parameters: 2 7 7 80 10 50 1000
Length:  105315579

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   

This is table  301  of  325  ( 38900 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97918776--97919853
44
23.6
44
73
9
646
32
16
20
30
1.94
97918913--97919392
89
5.3
89
75
8
299
31
16
21
30
1.96
97919049--97919391
183
1.9
183
84
3
458
30
16
21
30
1.96
97919093--97919347
139
1.8
139
82
5
327
30
16
22
30
1.96
97919357--97919541
52
3.7
51
74
13
179
37
15
15
31
1.88
97919363--97919547
96
1.9
97
87
3
275
37
15
15
32
1.88
97921363--97921413
23
2.1
25
85
7
70
23
5
1
68
1.22
97926418--97926534
44
2.7
44
84
9
134
35
23
18
23
1.96
97935983--97936029
15
3.0
15
87
6
58
78
0
2
19
0.85
97935983--97936043
25
2.5
24
80
15
70
75
1
1
21
0.98
97936011--97936063
3
17.0
3
76
7
52
66
1
5
26
1.25
97935982--97936071
44
2.0
45
81
10
105
70
2
4
23
1.17
97938279--97938336
29
2.0
29
96
0
107
34
5
17
43
1.71
97938581--97938617
14
2.6
14
86
4
56
72
0
5
21
1.04
97940307--97940791
44
10.7
44
70
7
209
28
22
18
31
1.97
97940290--97940782
133
3.6
133
74
9
325
28
22
17
31
1.96
97949927--97949971
22
2.0
23
95
4
83
42
22
17
17
1.89
97950162--97950256
28
3.6
24
81
13
93
46
33
4
15
1.66
97950176--97950259
28
3.0
28
91
1
132
46
30
3
19
1.66
97954800--97954841
20
2.1
20
100
0
84
21
26
19
33
1.97
97956541--97956586
19
2.4
19
85
7
58
41
10
26
21
1.86
97960521--97960567
3
15.3
3
78
12
51
63
0
6
29
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97960516--97960567
18
2.7
19
82
14
63
65
0
5
28
1.16
97960664--97960702
18
2.2
17
86
13
53
71
0
2
25
0.98
97960663--97960701
21
1.9
20
89
5
60
71
0
2
25
0.98
97961756--97961805
20
2.4
22
83
12
61
20
14
46
20
1.84
97964134--97964180
19
2.4
19
85
7
58
23
2
12
61
1.42
97965917--97965966
25
2.0
25
88
7
75
24
20
2
54
1.55
97966087--97966193
54
2.0
54
100
0
214
33
7
18
40
1.79
97966463--97966520
26
2.3
25
80
8
64
70
3
0
25
1.03
97966476--97966523
26
1.9
24
87
8
69
64
4
0
31
1.12
97966494--97966552
21
2.8
22
85
7
70
69
6
0
23
1.12
97970583--97970652
32
2.2
32
97
2
131
35
7
14
42
1.73
97972400--97972433
16
2.1
16
89
10
52
67
0
0
32
0.91
97984093--97984290
4
49.5
4
100
0
396
50
25
0
24
1.50
97984934--97985212
99
2.8
99
90
1
425
34
24
12
29
1.92
97996994--97997039
24
1.9
24
86
0
65
54
13
21
10
1.69
97997428--97997517
27
3.3
27
78
10
87
45
16
17
20
1.85
97997428--97997544
27
4.3
27
77
8
76
43
17
17
20
1.88
97997536--97997770
27
8.7
27
80
1
220
26
14
17
41
1.88
97997536--97997753
54
4.0
54
82
3
251
27
14
16
41
1.87
97998083--97998128
18
2.6
18
82
0
56
23
19
13
43
1.86
98000860--98000902
3
14.3
3
90
0
68
32
2
0
65
1.06
98011051--98011124
27
2.7
27
91
0
121
43
24
16
16
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98011062--98011140
27
2.9
27
88
0
104
44
18
16
20
1.87
98011104--98011339
27
8.8
27
78
3
174
28
13
19
38
1.90
98013672--98013720
20
2.5
20
80
6
55
67
2
6
24
1.24
98021052--98021125
27
2.7
27
91
0
121
43
24
16
16
1.87
98021063--98021141
27
2.9
27
88
0
104
44
18
16
20
1.87
98021144--98021347
27
7.6
27
80
1
167
25
14
19
40
1.89
98023673--98023721
20
2.5
20
80
6
55
67
2
6
24
1.24
98038758--98038812
5
10.6
5
94
5
92
40
20
0
40
1.52
98044856--98044906
21
2.4
22
74
12
52
39
1
0
58
1.09
98045226--98045262
17
2.2
18
90
9
60
59
0
0
40
0.97
98045229--98045269
18
2.3
19
83
12
59
53
2
0
43
1.13
98046688--98046744
20
2.7
22
75
19
59
24
0
14
61
1.33
98053610--98053779
43
4.0
43
80
9
193
31
28
15
24
1.96
98059853--98059904
4
13.0
4
79
0
50
26
9
0
63
1.25
98062912--98062955
16
2.5
17
89
10
63
29
22
9
38
1.85
98065763--98066220
44
10.0
45
69
11
239
30
19
21
29
1.97
98065763--98066045
89
3.1
89
71
12
241
29
19
20
30
1.97
98065948--98066636
143
4.8
143
83
4
777
31
19
20
28
1.97
98066523--98066629
44
2.4
44
79
11
112
30
20
17
30
1.96
98077675--98077722
3
15.7
3
95
4
87
31
2
0
66
1.03
98078359--98078408
25
2.0
25
100
0
100
28
12
24
36
1.91
98083242--98083275
13
2.6
13
85
0
50
26
0
35
38
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98091481--98091692
51
4.2
51
93
0
361
33
12
22
32
1.91
98091481--98091695
102
2.1
102
97
0
403
33
12
22
32
1.91
98093709--98093815
28
4.0
28
84
9
143
18
3
31
45
1.67
98093713--98093815
51
1.9
56
86
11
153
18
3
33
44
1.68
98093713--98093829
23
4.6
23
83
14
126
16
4
34
45
1.67
98094031--98094091
21
2.8
21
77
5
59
14
22
27
34
1.94
98098565--98098616
23
2.2
25
82
6
63
53
1
7
36
1.41
98099219--98099266
11
4.4
11
83
0
60
79
4
4
12
1.02
98103617--98103679
26
2.4
25
78
19
65
68
0
3
28
1.05
98103686--98103745
23
2.6
22
84
10
75
61
5
5
28
1.38
98104881--98104914
15
2.4
14
90
5
50
82
0
2
14
0.79
98104897--98104946
18
2.7
19
78
12
59
74
2
10
14
1.16
98105074--98105137
21
2.8
24
72
13
71
1
18
15
64
1.38
98105698--98105737
13
3.1
13
81
0
53
37
22
7
32
1.82
98114431--98114492
32
2.0
31
81
12
74
24
11
11
53
1.69
98130065--98130095
15
2.1
15
100
0
62
54
0
25
19
1.44
98130189--98130218
15
2.0
15
100
0
60
20
26
20
33
1.97
98130139--98130268
65
2.0
65
98
0
251
32
16
23
28
1.96
98130204--98130303
50
2.0
51
86
5
141
36
14
23
27
1.93
98130205--98130310
51
2.1
50
84
5
133
35
15
21
27
1.93
98130286--98130465
31
5.8
31
89
2
263
27
18
27
26
1.98
98130586--98130782
42
4.7
42
94
1
333
31
14
25
27
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98133608--98133647
16
2.4
16
87
4
53
25
10
0
65
1.24
98133666--98134074
3
137.7
3
68
13
132
28
7
2
61
1.35
98133771--98133835
19
3.2
19
80
8
67
27
4
0
67
1.10
98133673--98133823
23
6.7
22
72
15
96
23
5
2
68
1.23
98133864--98133945
32
2.6
32
80
5
85
31
8
1
58
1.36
98134015--98134089
18
4.5
16
78
16
57
28
8
0
64
1.22
98136118--98136155
19
2.0
20
89
5
60
23
23
10
42
1.85
98136306--98136339
12
2.8
12
86
0
50
50
17
23
8
1.74
98139102--98139221
51
2.4
51
89
0
177
25
22
12
39
1.89
98144158--98144182
12
2.1
12
100
0
50
84
0
16
0
0.63
98144293--98144433
69
2.0
69
95
0
255
28
20
12
38
1.89
98147312--98147352
21
2.0
21
90
0
64
29
21
29
19
1.98
98156195--98156298
31
3.4
31
78
7
131
53
3
0
41
1.25
98156195--98156325
66
2.1
65
91
7
216
51
4
0
42
1.27
98156255--98156359
16
6.7
16
67
25
64
55
2
1
40
1.26
98156362--98156638
138
2.0
138
100
0
554
32
22
14
30
1.94
98159609--98159636
9
3.1
9
100
0
56
21
0
0
78
0.75
98161360--98161442
25
3.3
25
78
9
80
28
10
22
37
1.88
98161373--98161453
25
3.2
24
76
13
83
29
14
19
35
1.92
98161365--98161465
50
2.0
50
81
7
116
27
15
19
36
1.93
98162693--98162743
16
3.2
16
67
10
50
64
3
7
23
1.37
98162693--98162753
28
2.0
30
84
12
81
63
4
6
24
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98162711--98162764
28
1.9
28
81
7
65
66
5
3
24
1.29
98164351--98164399
20
2.5
20
83
6
64
20
2
8
69
1.24
98164787--98165034
133
1.9
134
82
4
322
28
28
17
25
1.97
98164988--98165414
44
9.6
44
69
10
215
27
28
16
27
1.97
98164868--98165519
178
3.7
176
83
5
750
28
26
17
27
1.98
98166416--98166449
16
2.1
16
100
0
68
61
5
8
23
1.47
98172347--98172450
55
1.9
55
87
0
154
28
31
26
12
1.93
98173980--98174017
12
3.0
13
92
7
69
15
0
5
78
0.91
98180981--98181168
49
3.8
49
85
2
250
27
19
23
29
1.98
98180980--98181168
100
1.9
100
91
0
306
26
19
24
29
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325