Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A10
Parameters: 2 7 7 80 10 50 1000
Length:  110302803

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   

This is table  207  of  343  ( 41150 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68432865--68432950
8
9.8
8
72
15
55
27
2
1
68
1.09
68432871--68432919
19
2.6
18
83
6
62
26
2
0
71
0.97
68432871--68432950
17
4.5
17
77
12
63
27
2
0
70
1.01
68432881--68432941
25
2.4
25
86
8
79
27
3
0
68
1.05
68433960--68434016
28
2.0
28
96
0
105
26
22
22
28
1.99
68440631--68440735
50
2.1
50
81
13
119
20
30
1
47
1.61
68441288--68441406
64
1.9
63
80
5
141
26
14
20
39
1.90
68442515--68442563
26
2.0
24
92
8
80
61
4
2
32
1.26
68442546--68442578
12
2.8
12
86
4
50
75
6
0
18
1.00
68442518--68442579
26
2.6
25
80
12
67
67
4
1
25
1.19
68442550--68442592
21
2.0
21
86
4
59
72
9
0
18
1.11
68446322--68446370
20
2.3
20
82
6
62
36
2
2
59
1.21
68446459--68446644
99
1.9
99
85
4
259
37
14
12
36
1.84
68446958--68446995
19
1.9
20
89
10
60
55
0
5
39
1.23
68457365--68457411
23
2.0
23
83
8
58
27
10
14
46
1.78
68468186--68468329
21
6.6
21
80
13
123
29
27
0
43
1.55
68468204--68468332
14
9.2
15
82
12
127
27
28
0
43
1.55
68468202--68468309
7
15.6
7
86
5
148
29
28
0
41
1.56
68468213--68468339
7
18.1
7
84
3
61
27
28
0
43
1.61
68480053--68480077
2
12.5
2
100
0
50
52
0
0
48
1.00
68480869--68480900
12
2.7
12
90
0
55
34
6
3
56
1.40
68481997--68482034
5
7.4
5
88
5
58
81
0
2
15
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68486450--68486492
5
8.4
5
89
5
68
81
0
2
16
0.79
68489028--68489072
23
1.9
24
81
4
56
24
51
4
20
1.66
68489436--68489477
18
2.3
19
76
12
52
9
38
26
26
1.87
68491287--68491316
15
2.0
15
100
0
60
33
20
6
40
1.78
68500639--68500698
19
3.0
20
85
9
79
25
0
18
56
1.41
68500722--68500798
40
1.9
40
83
0
100
40
7
15
36
1.76
68500722--68500809
20
4.4
20
71
1
70
43
7
13
35
1.74
68501695--68501744
20
2.5
20
86
3
73
50
12
12
26
1.74
68501958--68501982
4
6.2
4
100
0
50
48
0
0
52
1.00
68503816--68503885
21
3.4
21
69
13
56
60
0
4
35
1.17
68503900--68503930
12
2.5
13
89
10
55
64
0
0
35
0.94
68503905--68503935
16
2.0
15
93
6
53
64
0
0
35
0.94
68504240--68504305
17
3.7
18
83
6
89
36
13
10
39
1.80
68504690--68505124
83
5.2
83
95
0
764
27
20
20
32
1.97
68505049--68505403
119
3.0
119
92
0
586
29
19
18
33
1.95
68505395--68505574
44
4.1
44
72
11
170
28
25
16
29
1.97
68506445--68506508
22
3.0
22
84
4
69
3
21
0
75
0.95
68506452--68506512
22
2.9
21
88
9
81
1
16
0
81
0.76
68506460--68506512
13
4.3
13
79
16
60
1
15
0
83
0.74
68506472--68506511
11
3.6
11
87
12
64
0
15
0
85
0.61
68511976--68512021
3
15.3
3
91
8
76
65
0
0
34
0.93
68511976--68512018
17
2.6
17
96
3
79
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68512378--68512447
21
3.4
21
73
13
65
61
0
4
34
1.16
68512380--68512440
28
2.2
29
77
19
67
59
0
4
36
1.19
68512467--68512497
16
2.0
15
93
6
53
64
0
0
35
0.94
68512804--68512876
19
3.9
19
84
13
107
35
13
10
39
1.80
68512794--68512876
36
2.2
39
89
10
127
36
14
9
39
1.79
68513384--68513408
7
3.6
7
100
0
50
56
0
0
44
0.99
68514474--68514624
43
3.5
44
82
8
184
25
17
25
30
1.98
68515355--68515403
22
2.2
20
77
19
53
18
4
26
51
1.64
68518275--68518314
3
13.3
3
89
0
62
30
2
2
65
1.19
68532890--68532955
31
2.1
31
91
0
105
53
22
9
15
1.70
68533140--68533183
21
2.1
21
91
0
70
4
52
18
25
1.64
68533152--68533192
21
2.0
21
90
0
64
2
53
17
26
1.56
68533604--68533632
13
2.1
14
93
6
51
55
10
0
34
1.34
68538690--68539113
9
46.7
9
66
18
114
35
3
15
46
1.61
68538740--68538904
30
5.3
30
72
12
107
36
3
12
47
1.57
68538694--68539100
16
25.0
16
66
19
130
35
3
14
46
1.61
68538789--68539104
81
3.9
81
77
14
330
36
3
14
45
1.62
68538948--68539100
71
2.2
70
86
4
227
36
3
15
45
1.62
68540594--68540625
14
2.2
15
94
5
57
34
12
0
53
1.39
68540750--68540786
18
2.1
18
100
0
74
40
5
10
43
1.63
68542727--68542810
37
2.3
37
87
0
114
22
11
50
15
1.77
68543638--68543669
15
2.1
15
94
0
55
28
6
0
65
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68544583--68544771
105
1.8
105
88
0
288
24
20
18
35
1.95
68544976--68545644
44
14.5
44
71
10
367
34
17
19
28
1.94
68545063--68545228
89
1.9
90
92
1
280
36
17
17
28
1.93
68544976--68545644
96
7.2
96
76
9
534
34
17
19
28
1.94
68545239--68545472
45
4.8
51
71
9
150
35
17
18
29
1.93
68544976--68545650
276
2.5
271
82
4
786
34
17
19
28
1.94
68545514--68545797
51
5.9
50
70
12
162
33
17
19
29
1.95
68550297--68550347
4
12.8
4
78
0
57
27
3
0
68
1.07
68555834--68556169
112
3.0
111
84
4
421
32
31
9
26
1.88
68557040--68557513
236
2.0
236
99
0
930
36
21
16
25
1.94
68558226--68558380
43
3.6
42
89
5
231
31
32
23
12
1.91
68558226--68558401
86
2.1
84
88
6
257
31
32
22
13
1.92
68558373--68558453
36
2.2
38
82
6
105
32
24
22
20
1.98
68562784--68563255
234
2.0
235
95
0
847
36
21
16
25
1.94
68563911--68564185
43
6.4
43
90
0
401
30
33
22
13
1.92
68564157--68564240
38
2.2
38
86
0
123
30
26
21
21
1.98
68574719--68574775
26
2.2
24
80
19
71
1
29
0
68
1.00
68574820--68574886
34
2.0
33
88
2
98
22
50
13
13
1.76
68589289--68589321
16
2.1
16
100
0
66
18
6
18
57
1.60
68601688--68601737
15
3.4
15
86
2
66
10
18
12
60
1.59
68604106--68604279
46
3.8
45
79
12
203
21
20
29
28
1.98
68606651--68607152
254
2.0
254
87
0
718
28
20
12
38
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68621201--68621299
14
7.5
13
74
16
80
75
2
2
20
1.00
68621207--68621299
24
3.8
23
79
17
100
76
2
1
20
0.95
68621207--68621299
6
15.3
6
76
16
86
76
2
1
20
0.95
68621592--68621650
26
2.3
26
84
0
73
44
10
35
10
1.72
68624237--68624288
17
2.9
17
81
10
68
23
19
15
42
1.89
68624215--68624248
7
4.9
7
100
0
68
26
14
0
58
1.36
68624237--68624283
19
2.6
18
83
9
60
25
17
10
46
1.79
68627822--68627846
13
1.9
13
100
0
50
8
8
28
56
1.57
68630556--68630652
31
3.1
31
95
1
176
60
11
6
21
1.52
68634630--68634678
22
2.0
26
85
14
70
30
4
4
61
1.33
68637088--68637212
66
1.9
64
86
3
178
46
19
8
26
1.77
68637254--68637300
19
2.5
19
77
12
53
61
0
2
36
1.08
68637336--68637368
17
1.9
17
100
0
66
69
0
6
24
1.10
68637652--68637740
9
9.4
10
71
14
55
28
3
2
66
1.20
68637605--68637721
57
2.0
59
86
6
168
29
6
2
60
1.36
68637626--68637729
28
3.7
28
76
12
97
31
5
1
60
1.31
68637680--68637740
19
3.2
20
75
9
56
27
3
3
65
1.24
68639192--68639247
27
2.0
27
83
10
69
37
0
0
62
0.95
68639310--68639636
97
3.6
90
89
6
505
34
21
8
35
1.84
68639451--68639708
90
2.9
88
86
6
310
37
20
9
32
1.84
68639738--68639788
19
2.7
19
85
11
70
60
1
1
35
1.19
68640097--68640141
21
2.1
21
84
8
56
26
8
4
60
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68640091--68640256
53
3.0
54
82
13
189
29
6
1
62
1.29
68640148--68640237
17
5.2
16
75
16
65
28
6
1
63
1.27
68640091--68640229
27
5.1
26
71
13
84
29
5
2
62
1.30
68640127--68640274
27
5.6
25
73
14
102
33
4
0
61
1.20
68640196--68640264
18
3.9
18
81
11
63
30
5
0
63
1.17
68640215--68640280
18
3.7
18
82
11
66
37
3
0
59
1.13
68640249--68640316
28
2.4
27
71
7
64
39
1
2
55
1.24
68640332--68640556
87
2.6
86
77
9
231
35
8
18
37
1.82
68641293--68641348
24
2.3
24
88
8
87
76
16
1
5
1.05
68641308--68641377
35
1.9
36
88
11
108
74
17
4
4
1.14

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343