Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A10
Parameters: 2 7 7 80 10 50 1000
Length:  110302803

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   

This is table  97  of  343  ( 41150 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32331783--32332028
120
2.1
118
82
8
299
34
13
8
42
1.76
32341135--32341171
6
6.2
6
87
0
56
78
0
2
18
0.87
32344098--32344208
42
2.7
41
80
6
134
29
15
25
29
1.96
32348762--32348791
16
1.9
16
93
6
53
50
20
0
30
1.49
32355360--32355508
40
3.8
40
90
2
212
22
30
23
24
1.99
32376294--32376446
46
3.4
47
69
16
153
32
17
26
23
1.97
32376432--32376695
46
5.7
46
78
10
161
27
18
29
25
1.98
32376293--32376476
87
2.1
87
95
0
332
30
17
27
24
1.97
32376431--32376647
92
2.4
92
80
9
230
27
17
29
25
1.98
32382542--32382632
46
2.0
45
87
8
130
26
18
30
24
1.98
32384338--32384385
20
2.4
20
89
0
69
50
8
10
31
1.66
32408564--32408702
44
3.1
46
81
16
132
28
19
29
22
1.98
32415362--32415537
46
3.8
45
80
11
205
21
20
29
28
1.98
32415358--32415529
93
1.8
93
93
2
301
20
20
30
27
1.98
32418446--32418529
29
2.9
29
82
10
100
10
16
15
57
1.65
32418455--32418533
15
5.4
15
80
10
92
10
17
12
59
1.60
32442137--32442212
29
2.6
29
82
0
98
21
15
28
34
1.94
32445572--32445695
58
2.2
58
98
1
241
37
27
4
29
1.77
32454896--32455080
40
4.7
40
80
6
171
26
27
21
24
1.99
32454863--32455080
79
2.8
80
76
15
220
26
27
21
25
1.99
32463050--32463232
79
2.3
81
84
7
232
25
27
22
24
2.00
32463048--32463232
40
4.7
40
80
9
209
25
28
22
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32473821--32473980
42
3.8
42
86
6
216
31
13
25
29
1.94
32473821--32473986
85
2.0
84
85
5
228
31
13
25
29
1.94
32480355--32480415
30
2.0
30
87
0
86
37
8
24
29
1.84
32480879--32481029
68
2.3
64
80
7
160
29
16
27
26
1.97
32480948--32481130
67
2.8
64
75
8
174
30
16
30
22
1.96
32487825--32487869
17
2.6
17
89
6
65
8
28
37
24
1.86
32501786--32502110
40
8.2
40
88
3
455
22
22
27
27
1.99
32505357--32505542
40
4.7
40
89
4
254
25
27
22
24
2.00
32513189--32513348
40
4.0
40
91
4
236
23
21
28
26
1.99
32513192--32513363
79
2.2
79
84
8
208
25
22
26
26
2.00
32525130--32525314
79
2.3
81
80
11
211
27
28
20
23
1.99
32525130--32525314
40
4.7
40
75
10
182
27
28
20
23
1.99
32532119--32532523
47
8.6
47
94
1
675
33
8
29
28
1.86
32544955--32545068
48
2.4
48
79
8
124
32
21
19
26
1.97
32552296--32552336
20
2.0
21
95
4
75
19
9
19
51
1.74
32555015--32555083
33
2.1
33
100
0
138
26
14
27
31
1.95
32559039--32559080
22
1.9
22
85
9
59
16
7
28
47
1.73
32569371--32569471
50
2.0
50
100
0
202
25
27
7
38
1.84
32574527--32574707
40
4.6
40
83
6
217
25
27
22
24
2.00
32574527--32574707
79
2.3
80
80
8
208
25
27
22
24
2.00
32586410--32586584
46
3.8
46
77
13
187
29
29
20
21
1.98
32586417--32586588
93
1.8
93
92
0
290
28
29
20
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32586418--32586604
46
4.0
44
72
16
130
28
28
20
21
1.98
32589045--32589179
48
2.8
48
89
0
189
23
21
25
28
1.99
32589045--32589320
48
5.8
48
72
13
167
25
21
26
26
1.99
32593088--32593313
47
4.8
48
75
11
182
23
30
18
28
1.98
32593089--32593308
46
4.7
45
74
14
137
23
30
18
28
1.98
32593089--32593351
140
1.9
141
81
7
329
23
29
18
28
1.98
32594633--32594696
28
2.3
28
91
5
103
34
15
23
26
1.95
32596132--32596319
40
4.7
40
91
3
308
25
27
22
24
2.00
32597933--32598163
51
4.5
51
91
3
367
30
14
25
29
1.95
32600954--32601022
21
3.1
22
79
10
70
46
13
11
28
1.78
32601366--32601412
21
2.2
21
84
0
58
12
8
42
36
1.74
32601998--32602143
65
2.3
65
86
4
199
42
10
25
21
1.85
32609900--32609982
42
2.0
43
83
7
107
15
32
22
28
1.95
32611897--32611946
25
2.0
25
88
0
73
38
20
2
40
1.64
32614724--32614889
27
6.1
27
83
2
190
16
24
22
35
1.95
32614724--32614889
81
2.0
81
87
4
237
16
24
22
35
1.95
32614724--32614889
54
3.1
54
92
1
262
16
24
22
35
1.95
32622759--32622924
54
3.1
54
90
1
244
16
24
23
35
1.95
32622759--32622924
27
6.2
26
84
7
197
16
24
23
35
1.95
32622759--32622924
81
2.0
81
85
4
219
16
24
23
35
1.95
32624115--32624143
14
2.1
14
100
0
58
58
6
0
34
1.25
32628518--32628559
20
2.1
20
100
0
84
28
14
28
28
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32635528--32635574
19
2.5
19
87
12
71
61
0
12
25
1.31
32636094--32636169
22
3.5
22
78
7
82
11
18
22
47
1.81
32643769--32643813
22
2.0
22
91
0
72
37
6
2
53
1.40
32643779--32643963
3
61.7
3
73
11
121
33
8
1
57
1.35
32644122--32644333
3
71.7
3
72
9
105
29
8
1
59
1.37
32644171--32644227
29
1.9
30
89
3
89
26
7
0
66
1.17
32656232--32656644
44
9.4
44
65
7
167
29
23
19
27
1.98
32656196--32656667
88
5.4
88
86
1
624
29
22
20
27
1.98
32656641--32657248
44
13.4
45
71
14
328
31
16
21
30
1.95
32656639--32657214
180
3.2
181
87
3
822
31
16
21
30
1.95
32660014--32660186
3
57.0
3
72
8
73
61
6
6
25
1.46
32659958--32660067
12
9.4
12
72
15
54
63
5
5
25
1.38
32660143--32660186
22
2.0
22
86
0
61
65
0
4
29
1.12
32661423--32661589
3
55.7
3
69
10
83
32
8
1
56
1.39
32661479--32661589
31
3.6
31
75
9
79
29
8
1
60
1.36
32661532--32661573
17
2.5
17
88
7
59
28
7
2
61
1.35
32661552--32661592
14
2.9
15
89
7
59
31
4
2
60
1.30
32661680--32661730
26
2.0
25
82
17
61
23
13
1
60
1.43
32661751--32661986
3
78.7
3
73
7
149
30
8
1
59
1.34
32663224--32663254
2
15.0
2
93
6
53
48
3
0
48
1.17
32666252--32666300
26
2.0
24
84
8
62
71
6
2
20
1.18
32667141--32667198
29
2.0
30
82
3
73
60
5
6
27
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32672121--32672161
20
2.2
19
86
8
57
48
0
12
39
1.41
32672153--32672194
19
2.2
19
83
8
50
57
7
2
33
1.39
32673979--32674010
15
2.1
15
94
0
55
15
6
9
68
1.36
32675260--32675297
19
2.0
20
89
5
60
55
31
10
2
1.48
32677119--32677400
50
5.6
50
74
7
232
25
16
25
32
1.96
32677170--32677351
101
1.8
100
84
7
251
26
17
24
31
1.97
32682572--32682664
48
1.9
48
93
0
159
25
24
24
24
2.00
32682572--32682676
48
2.2
48
89
0
156
25
24
23
25
2.00
32686635--32686714
30
2.7
30
80
0
106
22
25
11
41
1.87
32686743--32686806
29
2.2
30
83
8
78
17
26
14
42
1.87
32686770--32686825
29
1.9
29
81
0
67
23
26
14
35
1.93
32686802--32686864
29
2.2
29
85
0
81
25
28
15
30
1.96
32694050--32694454
47
8.6
47
93
1
666
28
29
8
33
1.86
32694100--32694178
25
3.3
25
66
16
76
31
29
5
34
1.79
32699961--32700013
3
17.7
3
92
0
88
33
1
0
64
1.05
32702045--32702130
43
2.0
43
97
0
163
27
24
15
32
1.95
32702140--32702207
34
2.0
34
97
0
127
45
4
20
29
1.70
32714873--32714920
20
2.4
20
96
0
87
16
29
35
18
1.93
32715412--32715472
26
2.4
25
81
5
77
29
9
16
44
1.80
32715831--32716006
83
2.1
83
97
0
334
27
19
19
32
1.97
32715930--32716642
119
6.0
119
94
0
1183
30
17
17
34
1.94
32716634--32716813
44
4.1
44
73
8
168
29
25
14
30
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32723936--32724042
17
5.9
18
87
6
155
36
14
11
38
1.81
32723936--32724042
35
3.0
35
95
4
187
36
14
11
38
1.81
32726680--32726720
20
2.1
19
86
4
55
21
0
31
46
1.52
32741921--32742030
43
2.6
43
89
0
175
30
30
24
13
1.94
32742023--32742106
38
2.2
38
86
0
123
33
27
19
20
1.96
32743636--32743902
104
2.6
104
93
1
455
18
20
30
29
1.97
32751192--32751242
26
2.0
26
96
0
93
11
23
35
29
1.90
32751115--32751479
102
3.6
104
94
3
618
18
20
30
30
1.97
32767318--32767379
31
2.0
32
87
3
90
20
24
19
35
1.96
32767232--32767372
67
2.0
67
84
8
176
19
28
20
31
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343