Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A10
Parameters: 2 7 7 80 10 50 1000
Length:  110302803

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   

This is table  110  of  343  ( 41150 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37092952--37093135
79
2.3
82
83
8
229
25
27
22
25
2.00
37102283--37102316
15
2.3
15
89
0
50
32
0
8
58
1.29
37108008--37108037
11
2.7
11
89
0
51
50
0
26
23
1.50
37112337--37112437
29
3.5
29
81
10
91
33
2
1
61
1.22
37112364--37112495
3
45.3
3
80
4
146
31
3
1
63
1.21
37112689--37112738
3
16.7
3
87
0
55
34
8
0
58
1.28
37112867--37112909
19
2.4
19
85
11
56
30
2
0
67
1.03
37115510--37115554
21
2.1
21
84
8
56
2
46
20
31
1.62
37115964--37115992
13
2.1
14
93
6
51
55
10
0
34
1.34
37121046--37121117
9
8.2
9
77
9
69
36
0
16
47
1.47
37121050--37121124
34
2.2
34
85
4
98
34
0
16
49
1.46
37121212--37121323
30
3.6
30
74
17
111
38
3
14
43
1.62
37121244--37121289
16
2.7
17
86
10
67
36
2
17
43
1.61
37121242--37121349
9
12.1
9
70
16
82
37
3
14
43
1.64
37121207--37121354
64
2.3
64
91
0
233
37
3
14
44
1.62
37121459--37121797
99
3.5
98
95
2
585
50
4
5
39
1.46
37125579--37125612
13
2.5
13
85
4
50
44
23
0
32
1.54
37125794--37125833
21
1.9
21
85
10
55
60
22
0
17
1.37
37126290--37126324
17
2.0
17
88
5
52
65
14
0
20
1.26
37126399--37126518
41
2.9
41
75
7
100
30
18
17
34
1.94
37126464--37126577
41
2.8
41
93
0
183
25
23
19
31
1.98
37126612--37126636
12
2.1
12
100
0
50
52
32
8
8
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37129786--37130010
40
5.6
40
80
5
256
24
21
28
26
1.99
37129786--37130010
83
2.8
80
87
4
335
24
21
28
26
1.99
37132398--37132515
27
4.4
25
74
12
83
30
39
16
12
1.86
37137562--37137683
55
2.2
55
80
0
127
27
29
26
17
1.97
37146224--37149748
743
4.7
739
77
8
2594
30
23
15
30
1.96
37148276--37149868
745
2.1
741
76
7
1676
28
24
16
30
1.96
37155408--37155572
46
3.6
46
71
14
149
30
30
17
21
1.96
37155361--37155529
47
3.6
47
72
13
177
29
30
18
21
1.97
37155353--37155579
93
2.4
93
91
1
366
29
29
18
21
1.97
37158011--37158073
15
4.2
15
74
8
65
61
15
12
9
1.55
37158013--37158069
30
1.9
30
89
7
89
63
17
12
7
1.50
37161047--37161220
47
3.7
47
74
13
187
28
31
18
21
1.97
37161040--37161212
93
1.9
93
97
0
328
30
31
17
20
1.96
37163129--37163163
15
2.3
15
90
9
54
17
8
0
74
1.06
37171160--37171341
3
59.3
3
65
22
51
32
3
2
62
1.24
37183722--37184224
205
2.5
205
89
1
760
30
18
22
28
1.97
37184933--37184959
13
2.1
13
100
0
54
14
33
29
22
1.94
37185913--37186106
3
63.3
3
70
18
109
31
3
2
62
1.22
37185992--37186036
16
2.8
16
83
13
56
40
0
0
60
0.97
37186245--37186361
19
6.2
19
67
25
70
30
3
2
63
1.24
37186231--37186288
31
1.9
30
85
3
80
27
3
0
68
1.05
37187906--37188042
41
3.3
41
88
4
188
37
26
17
18
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37195010--37195093
42
2.0
42
95
0
150
40
22
4
32
1.75
37199121--37199272
17
9.4
16
72
11
105
30
5
1
62
1.25
37199125--37199265
7
19.7
7
64
22
53
29
5
0
63
1.22
37199144--37199221
24
3.3
24
76
18
83
29
5
0
65
1.14
37208129--37208164
18
2.0
18
100
0
72
50
11
16
22
1.77
37211382--37212172
44
18.1
44
83
2
952
31
17
25
25
1.97
37213730--37213803
24
3.1
23
72
18
62
28
5
1
64
1.23
37213739--37213826
17
5.2
17
75
16
76
29
7
0
62
1.23
37218405--37218476
36
2.0
36
97
0
135
16
13
18
51
1.77
37220366--37220540
46
3.8
45
79
11
203
20
21
29
28
1.98
37220363--37220532
92
1.8
93
93
1
297
20
21
30
27
1.98
37223467--37223535
15
4.6
15
83
0
84
11
17
13
57
1.64
37223458--37223537
30
2.7
30
82
7
99
11
17
15
56
1.67
37225908--37226083
46
3.8
45
80
10
203
21
21
28
28
1.98
37225905--37226075
93
1.8
93
93
0
297
21
21
29
27
1.99
37230181--37230207
12
2.2
12
100
0
54
51
14
0
33
1.43
37232866--37232903
19
2.0
19
89
0
58
55
0
2
42
1.14
37234549--37234588
19
2.1
19
85
0
53
45
0
5
50
1.23
37234633--37234663
16
2.0
16
93
6
55
38
0
0
61
0.96
37234684--37234728
13
3.1
16
78
21
62
51
0
0
48
1.00
37234684--37234743
28
2.1
29
84
9
79
51
0
0
48
1.00
37242076--37242229
28
5.5
28
73
3
105
27
22
13
37
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37242076--37242229
56
2.8
56
74
9
143
27
22
13
37
1.92
37244843--37244977
40
3.4
40
94
0
243
21
19
29
29
1.97
37244844--37245001
80
2.0
80
87
0
226
23
20
27
28
1.99
37252653--37252728
40
1.9
40
81
10
93
63
3
2
30
1.26
37259781--37259821
21
2.0
22
86
13
61
14
26
46
12
1.80
37260957--37261218
47
5.5
48
71
15
156
24
29
18
27
1.98
37268628--37268760
48
2.7
49
91
2
205
26
32
15
25
1.96
37278408--37278523
43
2.7
42
81
7
153
31
17
23
28
1.97
37279856--37279884
8
3.6
8
100
0
58
41
10
24
24
1.86
37283355--37283471
38
3.1
38
90
3
175
23
23
17
35
1.96
37292088--37292232
40
3.6
40
84
4
184
25
24
26
24
2.00
37293910--37294026
38
3.1
38
89
6
177
23
22
19
35
1.96
37306880--37306991
37
3.0
37
89
2
154
29
28
16
25
1.97
37306898--37306999
37
2.8
37
92
3
161
26
28
17
27
1.98
37307135--37307374
48
5.0
48
92
2
390
30
28
7
34
1.84
37307135--37307373
98
2.5
96
91
1
388
30
28
7
34
1.84
37312980--37313098
29
4.2
29
82
6
136
27
27
15
29
1.96
37319319--37319438
56
2.1
56
98
0
231
45
9
23
22
1.81
37320565--37320789
40
5.7
40
83
5
260
25
20
27
26
1.99
37320652--37320822
40
4.3
39
84
8
147
26
19
27
26
1.99
37320604--37320822
80
2.8
79
81
6
212
27
19
26
26
1.99
37320565--37320822
119
2.2
119
79
6
265
26
20
27
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37327233--37327352
56
2.1
56
98
0
231
45
9
23
22
1.81
37332133--37332168
18
2.0
18
100
0
72
11
16
22
50
1.77
37339292--37339336
22
2.0
22
91
0
72
33
2
15
48
1.57
37343065--37343109
22
2.0
22
91
0
72
33
2
15
48
1.57
37350376--37350529
48
3.3
47
77
10
179
29
18
29
22
1.98
37350329--37350529
46
4.3
47
74
6
176
30
18
28
22
1.97
37353130--37353168
19
2.1
19
90
0
60
7
23
23
46
1.78
37353140--37353177
19
1.9
19
89
5
58
13
26
18
42
1.87
37358258--37358445
55
3.5
53
82
7
202
22
25
17
35
1.95
37358648--37358731
44
1.9
44
85
4
116
25
22
13
39
1.90
37363250--37363327
40
1.9
41
84
2
104
26
28
19
25
1.99
37363318--37363441
43
2.9
43
85
1
169
22
29
20
26
1.99
37380927--37381150
40
5.6
40
82
7
258
26
25
23
25
2.00
37380927--37381150
83
2.8
80
83
4
263
26
25
23
25
2.00
37386481--37386508
13
2.2
13
100
0
56
64
14
14
7
1.48
37390737--37390773
18
2.1
19
90
10
60
35
27
8
29
1.85
37396900--37397212
27
11.6
27
84
1
326
40
21
8
30
1.82
37396900--37397159
54
4.8
54
88
0
387
40
20
8
31
1.81
37396900--37397212
81
3.9
80
84
1
365
40
21
8
30
1.82
37396900--37397218
54
5.9
54
83
4
367
39
20
8
31
1.82
37396925--37397261
134
2.5
133
81
3
325
40
20
8
31
1.81
37396900--37397266
27
13.7
27
79
5
280
39
21
8
31
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37397250--37397768
27
19.3
27
87
1
709
34
20
21
22
1.96
37398198--37398259
22
2.8
22
85
7
81
22
22
20
33
1.97
37398425--37398491
27
2.5
27
82
2
82
20
23
17
37
1.94
37398628--37398798
6
27.3
6
67
22
86
19
15
15
49
1.79
37398639--37398696
19
3.4
19
66
26
56
18
15
15
50
1.79
37398636--37398790
31
5.0
31
90
0
220
19
15
15
49
1.79
37398720--37398815
25
4.0
23
75
15
77
17
15
16
50
1.79
37398701--37398759
19
3.5
19
65
29
60
18
15
16
49
1.80
37401195--37401314
24
5.2
23
73
17
81
23
20
15
40
1.90
37401211--37401261
23
2.2
24
86
10
70
19
25
15
39
1.91

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343