Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A10
Parameters: 2 7 7 80 10 50 1000
Length:  110302803

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   

This is table  95  of  343  ( 41150 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31676518--31676695
27
6.6
27
79
3
115
28
28
16
26
1.97
31676518--31676695
54
3.3
55
80
10
204
28
28
16
26
1.97
31676539--31676694
82
1.9
81
85
3
215
28
28
16
26
1.97
31731113--31731171
29
2.0
29
96
0
109
27
11
10
50
1.71
31736565--31736789
40
5.6
40
84
8
278
26
28
22
22
1.99
31736565--31736789
83
2.8
80
86
7
319
26
28
22
22
1.99
31745531--31745660
65
2.0
65
100
0
260
36
20
10
32
1.87
31752923--31753362
47
9.3
47
93
1
745
32
8
29
29
1.87
31753481--31753559
37
2.1
37
90
0
122
24
18
31
25
1.98
31760210--31760257
23
2.1
23
81
11
55
12
25
12
50
1.75
31771360--31771489
47
2.8
47
82
2
145
23
15
27
33
1.95
31771919--31772186
136
2.0
136
93
0
464
26
6
22
45
1.76
31773007--31773457
161
2.8
161
92
0
742
27
11
22
38
1.88
31779169--31779270
48
2.1
48
83
5
125
21
17
32
28
1.96
31780876--31780932
26
2.0
26
83
12
69
45
0
0
54
0.99
31785737--31785762
12
2.2
12
100
0
52
7
15
30
46
1.74
31786155--31786254
7
14.1
7
68
10
51
18
0
37
45
1.49
31786155--31786280
21
5.9
21
71
10
76
19
0
35
44
1.56
31786225--31786278
7
7.4
7
79
8
54
22
1
29
46
1.62
31791145--31791632
241
2.0
242
96
0
906
35
17
13
33
1.90
31791820--31791986
9
17.6
9
76
10
145
47
20
0
31
1.55
31791831--31791987
48
3.3
47
79
3
170
46
21
0
31
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31791837--31791953
39
3.0
39
97
0
216
47
21
0
31
1.51
31791820--31791984
57
2.9
57
82
7
183
47
21
0
30
1.55
31791820--31791971
39
4.1
37
89
6
193
47
21
0
30
1.56
31797534--31797577
21
2.1
21
91
0
70
29
18
52
0
1.46
31797871--31798032
43
3.7
43
84
3
200
21
20
25
32
1.98
31798163--31798319
41
3.8
40
84
5
197
27
18
26
27
1.98
31798163--31798320
82
1.9
83
85
1
219
27
18
26
27
1.99
31798359--31798430
37
1.9
37
85
0
99
45
33
0
20
1.52
31798543--31798606
7
9.0
7
77
3
65
25
3
25
46
1.67
31798559--31798609
15
3.5
15
86
2
68
23
1
27
47
1.63
31798543--31798605
14
4.4
14
80
4
72
23
3
25
47
1.66
31799201--31799254
7
7.6
7
97
2
99
61
0
0
38
0.96
31799201--31799312
15
7.6
15
88
2
111
68
0
0
30
0.95
31799251--31799292
7
5.7
7
91
8
66
88
0
0
11
0.53
31799201--31799261
21
2.9
21
90
2
95
63
0
0
36
0.94
31799377--31799417
19
2.2
18
91
4
64
75
0
2
21
0.92
31803381--31803635
43
6.0
43
85
4
358
23
20
29
25
1.99
31803381--31803635
83
3.0
85
85
4
347
23
20
29
25
1.99
31803392--31803641
126
2.0
124
91
1
401
23
20
28
26
1.99
31807668--31807794
46
2.7
46
96
2
227
22
29
20
26
1.98
31812770--31812817
21
2.3
22
85
10
73
33
29
14
22
1.94
31815176--31815396
46
4.7
46
74
13
168
22
27
18
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31817575--31817611
18
2.1
18
100
0
74
40
10
5
43
1.63
31826024--31826193
93
1.8
93
94
0
304
29
29
20
21
1.98
31826015--31826190
46
3.8
46
78
15
200
30
29
19
20
1.97
31826064--31826202
47
3.0
46
73
16
135
30
28
18
22
1.97
31828817--31828886
26
2.8
24
70
18
61
25
11
4
58
1.51
31839439--31839484
24
1.9
24
86
0
65
36
21
23
17
1.94
31839923--31839964
21
2.0
21
85
0
57
42
14
0
42
1.45
31839935--31839964
10
2.8
11
90
10
53
40
16
0
43
1.48
31841332--31841545
47
4.6
48
78
12
205
29
17
29
23
1.97
31854953--31855130
27
6.6
27
84
3
205
29
28
15
26
1.96
31854974--31855129
82
1.9
81
88
3
233
29
28
15
26
1.96
31858717--31858767
20
2.7
19
82
14
54
41
0
21
37
1.54
31859561--31859733
49
3.6
46
83
8
204
26
22
27
23
1.99
31861500--31861623
48
2.6
48
85
2
160
22
26
22
28
1.99
31872128--31872157
15
2.0
15
93
0
51
40
10
0
50
1.36
31874780--31874842
23
2.8
23
83
11
85
41
17
0
41
1.49
31881080--31881159
15
5.4
15
79
7
83
11
17
12
58
1.62
31881071--31881158
30
3.0
30
80
8
90
11
17
14
56
1.66
31883542--31883810
46
5.8
46
72
7
231
22
20
28
28
1.98
31883539--31883803
93
2.8
93
95
1
469
23
20
28
27
1.99
31890845--31890870
13
2.0
13
100
0
52
69
0
23
7
1.14
31891513--31891577
27
2.4
27
86
2
94
33
1
7
56
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31891524--31891576
27
2.0
27
96
0
97
28
1
9
60
1.38
31894761--31894990
27
8.6
27
86
4
286
27
14
28
30
1.95
31894762--31894964
107
1.9
107
89
2
318
27
14
28
29
1.95
31897042--31897147
40
2.7
40
85
1
133
52
4
13
29
1.60
31899036--31899133
27
3.5
28
87
6
128
27
15
27
29
1.96
31906976--31907073
27
3.5
28
87
6
128
27
15
27
29
1.96
31911277--31911349
29
2.5
28
80
10
76
61
1
1
35
1.13
31911308--31911354
18
2.6
17
83
12
58
55
2
0
42
1.12
31911387--31911424
20
2.0
20
89
5
60
36
5
2
55
1.37
31911420--31911500
41
1.9
43
82
12
105
34
1
3
60
1.22
31911481--31911528
19
2.6
19
90
3
62
37
4
2
56
1.30
31911481--31911521
19
2.2
19
95
0
73
39
2
2
56
1.26
31912184--31912249
20
3.3
20
80
4
80
50
1
1
46
1.20
31912183--31912226
8
6.0
8
82
15
51
52
0
0
47
1.00
31912183--31912244
28
2.2
28
85
5
81
51
1
0
46
1.10
31914597--31914758
67
2.4
67
89
1
234
40
15
19
25
1.90
31922645--31922691
23
2.0
23
87
0
67
46
10
10
31
1.73
31922798--31922822
12
2.1
12
100
0
50
52
0
0
48
1.00
31927445--31927721
48
5.8
48
92
1
405
36
5
26
31
1.79
31927445--31927721
96
2.9
96
90
1
448
36
5
26
31
1.79
31927445--31927721
144
1.9
144
91
1
457
36
5
26
31
1.79
31937205--31937404
27
7.4
27
86
1
258
34
18
22
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31938029--31938271
67
3.6
67
87
0
324
18
25
20
34
1.96
31942222--31942282
15
4.1
15
80
0
77
9
11
16
62
1.54
31942223--31942281
30
2.0
30
93
0
100
10
11
16
61
1.57
31944766--31944929
46
3.5
46
75
14
156
21
19
29
29
1.98
31951427--31951630
40
5.1
40
89
3
286
26
27
22
23
1.99
31953946--31954009
31
2.1
31
90
0
101
23
23
17
35
1.95
31954217--31954323
24
4.4
24
92
4
180
28
22
19
29
1.98
31954194--31954323
49
2.6
48
86
9
183
27
22
20
30
1.98
31961986--31962015
7
4.3
7
100
0
60
26
13
0
60
1.34
31962240--31962346
24
4.4
24
88
4
162
28
22
19
28
1.98
31962217--31962346
49
2.6
48
83
9
165
28
22
20
29
1.98
31962403--31962455
9
5.4
9
75
16
52
37
20
7
33
1.81
31962395--31962461
20
3.3
20
89
0
107
34
20
10
34
1.87
31962407--31962450
15
2.9
15
81
18
56
34
20
9
36
1.84
31965752--31965976
40
5.7
40
84
5
269
24
22
27
25
2.00
31965833--31965995
40
4.1
40
85
5
104
23
23
28
23
1.99
31965791--31966009
79
2.8
80
81
6
207
26
21
27
24
2.00
31970097--31970127
16
1.9
16
93
0
53
32
22
3
41
1.70
31970355--31970488
53
2.5
53
82
2
169
21
23
20
35
1.96
31970296--31970546
55
4.8
53
75
7
190
22
23
16
37
1.94
31978041--31978241
108
1.8
110
88
4
309
22
25
18
33
1.97
31977994--31978249
55
4.8
54
77
11
228
22
24
17
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31988642--31988783
60
2.4
59
78
8
153
26
22
21
29
1.99
31988785--31988828
19
2.2
20
84
4
54
34
25
18
22
1.96
31989428--31989458
8
3.9
8
95
0
53
3
22
22
51
1.62
31996175--31996301
28
4.5
28
86
4
166
33
25
12
29
1.92
31996175--31996301
29
4.5
29
84
6
154
33
25
12
29
1.92
31996337--31996438
51
2.0
51
100
0
204
25
29
5
39
1.79
32002617--32002921
46
6.4
47
75
12
193
27
18
30
23
1.98
32002864--32003254
131
3.0
131
99
0
773
28
16
26
28
1.97
32018949--32018987
14
2.8
13
81
11
51
17
2
2
76
1.01
32020439--32020524
25
3.4
25
85
6
113
27
24
19
27
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343