Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: A08
Parameters: 2 7 7 80 10 50 1000
Length:  123748673

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   

This is table  190  of  373  ( 44737 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63909020--63909052
16
2.1
16
94
0
57
15
24
18
42
1.88
63912100--63912133
18
1.9
18
88
5
52
29
14
14
41
1.86
63913244--63913353
57
1.9
58
87
5
161
28
30
15
25
1.96
63913244--63913358
29
4.0
28
81
6
124
28
30
14
26
1.95
63913583--63913630
16
3.0
16
87
0
69
14
22
18
43
1.87
63921105--63921166
30
2.1
30
100
0
124
25
16
22
35
1.94
63928110--63928583
47
10.1
47
94
0
768
28
29
9
32
1.88
63932134--63932195
30
2.1
30
96
0
115
27
14
22
35
1.93
63940610--63940885
39
7.1
39
91
0
426
21
25
29
23
1.99
63952225--63952407
48
3.8
47
83
1
195
26
21
30
22
1.99
63961835--63962019
40
4.7
40
80
6
198
24
21
28
25
1.99
63961882--63962052
79
2.2
79
79
12
190
28
18
27
25
1.98
63964153--63964252
46
2.1
48
85
9
134
35
21
23
21
1.96
63964153--63964252
24
4.2
24
83
8
109
35
21
23
21
1.96
63969478--63969582
42
2.5
42
78
10
99
31
27
17
23
1.97
63973122--63973263
14
9.9
14
73
9
72
20
1
35
42
1.61
63973160--63973212
22
2.4
22
83
0
70
20
0
30
49
1.50
63973114--63973291
7
25.0
7
72
10
56
20
1
33
44
1.59
63973165--63973320
14
10.9
15
69
12
69
19
0
37
41
1.57
63973175--63973316
71
2.0
72
80
4
162
19
0
38
40
1.57
63973182--63973321
7
19.7
7
72
11
70
19
0
38
41
1.57
63974191--63974231
21
2.0
21
95
0
73
26
46
0
26
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63975411--63975482
36
2.0
36
100
0
144
36
11
2
50
1.53
63981160--63981194
18
1.9
18
88
11
54
22
28
8
40
1.84
63982989--63983210
9
24.9
9
68
15
88
33
1
18
46
1.58
63983006--63983081
36
2.1
36
90
0
116
34
2
18
44
1.64
63983039--63983203
43
3.5
43
77
19
177
33
0
18
48
1.48
63983109--63983135
13
2.1
13
100
0
54
37
0
11
51
1.37
63983063--63983224
56
3.0
56
90
5
244
34
0
16
48
1.50
63983122--63983216
43
2.2
43
90
3
147
32
1
16
49
1.53
63983653--63983745
37
2.6
37
76
21
108
51
1
9
37
1.42
63986797--63987501
114
6.1
114
84
6
700
38
22
13
25
1.91
63987777--63987855
21
3.7
22
73
13
83
35
40
0
24
1.55
63987859--63987911
22
2.4
23
82
17
69
47
33
0
18
1.49
63987930--63987974
14
3.2
14
80
0
54
46
31
0
22
1.52
63987930--63987969
7
5.7
7
81
0
53
45
35
0
20
1.51
63988275--63988315
14
2.9
14
88
3
55
56
39
0
4
1.21
63988282--63988321
14
2.9
14
88
0
53
57
35
0
7
1.27
63988329--63988397
7
9.9
7
75
6
50
49
28
1
20
1.58
63988328--63988402
21
3.6
21
77
0
69
48
28
1
22
1.59
63988451--63988558
38
2.8
38
86
8
146
25
20
22
32
1.98
63988623--63988712
40
2.2
41
84
2
110
23
23
21
32
1.98
63988647--63988746
40
2.5
39
84
9
121
20
21
22
37
1.95
63988659--63988832
81
2.1
82
77
9
178
22
22
18
35
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63990386--63990432
19
2.5
19
76
10
51
21
2
4
72
1.12
63994746--63994878
69
1.9
70
90
1
214
33
13
16
36
1.88
63995637--63996104
40
11.9
39
83
3
483
22
21
27
28
1.99
63995653--63996083
79
5.4
80
82
4
516
22
22
27
28
1.99
63995637--63996083
157
2.8
158
92
2
695
22
21
27
28
1.99
63995653--63996104
119
3.8
118
87
1
566
21
21
27
28
1.99
63996052--63996154
39
2.6
39
82
0
125
20
17
27
34
1.95
63996071--63996184
39
2.9
39
81
3
122
20
16
25
37
1.93
63999011--63999054
2
22.0
2
85
0
61
50
6
0
43
1.29
63999011--63999054
12
3.5
12
88
11
70
50
6
0
43
1.29
63999011--63999054
14
3.3
14
93
6
74
50
6
0
43
1.29
64000541--64000698
44
3.7
43
73
10
135
31
26
19
22
1.98
64005561--64005636
22
3.3
23
80
14
102
36
19
23
19
1.95
64005561--64005636
24
3.3
22
83
10
100
36
19
23
19
1.95
64005561--64005661
46
2.1
48
87
8
145
36
19
21
21
1.95
64017641--64017755
29
3.9
29
88
3
160
27
15
29
26
1.96
64022640--64022748
37
2.9
37
94
0
182
26
30
18
24
1.98
64022899--64022995
50
1.9
50
89
4
151
28
25
8
37
1.85
64022953--64023239
47
6.1
47
91
1
407
26
29
11
32
1.91
64026027--64026349
41
7.9
41
77
8
291
35
20
18
25
1.95
64026027--64026350
82
4.0
81
86
4
400
36
20
18
25
1.95
64026027--64026411
164
2.4
165
80
6
408
36
20
17
25
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64029434--64029543
27
4.1
27
81
8
125
39
20
23
16
1.92
64029434--64029543
54
2.0
54
84
6
143
39
20
23
16
1.92
64030959--64031029
24
3.0
24
93
0
124
26
39
0
33
1.57
64035523--64035674
37
4.1
37
93
0
241
25
32
20
21
1.97
64035837--64036117
47
6.0
47
90
0
427
26
29
12
32
1.92
64035944--64036023
25
3.3
25
66
22
71
30
28
10
31
1.89
64040125--64040472
40
8.7
40
92
0
518
24
27
22
25
2.00
64041739--64041890
37
4.1
37
93
0
241
26
32
20
21
1.97
64042053--64042279
47
4.8
47
91
0
355
25
29
12
31
1.93
64042045--64042306
141
1.9
137
86
7
377
29
28
11
31
1.91
64047467--64047578
27
4.1
27
80
7
129
38
22
23
16
1.93
64047467--64047578
54
2.1
54
84
3
145
38
22
23
16
1.93
64049005--64049064
24
2.5
24
97
0
111
28
40
0
31
1.57
64049752--64050465
357
2.0
357
96
0
1320
32
12
18
37
1.88
64050533--64050573
17
2.4
17
91
4
64
21
0
31
46
1.52
64051077--64051108
16
2.0
16
100
0
64
50
12
6
31
1.65
64051569--64051618
25
2.0
25
84
7
66
18
42
12
28
1.85
64052887--64053146
9
29.1
9
71
14
164
46
15
2
35
1.60
64052879--64053127
25
10.0
25
69
18
126
46
14
2
36
1.58
64052914--64053146
63
3.5
71
79
14
253
46
15
3
35
1.61
64052890--64053149
16
16.1
16
73
13
119
46
15
2
35
1.60
64052923--64053080
63
2.5
63
92
4
266
46
14
3
34
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64052998--64053128
46
2.8
46
90
3
199
48
14
2
35
1.57
64058209--64058237
14
2.1
14
93
6
51
34
0
10
55
1.34
64058963--64059002
22
1.9
20
85
10
53
15
10
17
57
1.64
64058935--64059008
31
2.3
33
81
9
82
14
6
18
59
1.57
64063578--64063723
37
3.9
37
97
0
256
26
31
19
23
1.98
64063869--64064053
48
3.8
48
89
4
282
30
27
6
35
1.82
64063869--64064052
98
1.9
98
89
4
293
30
27
6
35
1.82
64064054--64064121
34
2.0
34
91
0
109
20
30
17
30
1.96
64064103--64064174
22
3.1
22
64
24
58
23
29
13
33
1.93
64064088--64064203
47
2.5
47
94
0
196
25
29
11
33
1.91
64064125--64064204
25
3.3
25
66
16
69
30
27
8
33
1.87
64070869--64071053
40
4.7
40
80
6
198
25
25
22
25
2.00
64079870--64079908
19
2.1
19
100
0
78
30
17
5
46
1.70
64081998--64082047
16
3.0
17
74
11
50
28
0
26
46
1.53
64085260--64085304
21
2.1
21
87
4
63
24
20
24
31
1.98
64091577--64091683
37
2.9
37
92
0
169
27
30
18
23
1.98
64091826--64092363
48
11.0
48
92
3
862
31
26
5
35
1.81
64091826--64092363
98
5.5
96
92
3
862
31
26
5
35
1.81
64091826--64092363
146
3.7
146
94
3
947
31
26
5
35
1.81
64105649--64105687
20
2.0
19
85
5
51
25
28
17
28
1.98
64113266--64113305
21
2.0
20
90
5
62
32
2
17
47
1.61
64129421--64129566
72
2.0
72
98
0
283
30
14
15
39
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64139056--64139112
27
2.1
27
100
0
114
38
3
3
54
1.35
64139102--64139147
21
2.2
21
84
7
58
54
4
4
36
1.40
64141861--64141921
25
2.4
25
88
5
86
42
21
19
16
1.89
64141873--64141921
25
1.9
26
95
4
91
40
20
22
16
1.91
64141964--64142028
26
2.5
26
77
2
69
40
20
15
24
1.91
64142759--64142805
19
2.4
20
71
3
51
23
27
17
31
1.96
64147807--64147869
27
2.4
25
77
12
65
14
4
6
74
1.18
64153231--64153257
10
2.7
10
100
0
54
25
11
18
44
1.83
64163068--64163211
46
3.1
46
69
21
113
27
28
20
22
1.99
64166965--64167000
18
2.0
18
100
0
72
33
16
0
50
1.46

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373