Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  154  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50471154--50471239
42
2.0
42
100
0
172
27
11
0
60
1.31
50478372--50478425
27
2.0
27
85
0
72
38
7
14
38
1.75
50478658--50478896
49
4.8
49
77
7
241
25
17
28
28
1.98
50480400--50480428
12
2.3
13
94
5
51
6
20
24
48
1.74
50480438--50480504
20
3.3
20
89
0
107
32
20
13
32
1.92
50485190--50485244
27
2.0
27
85
0
74
43
7
10
38
1.68
50491294--50491456
39
4.2
39
90
0
245
28
30
20
20
1.98
50491276--50491454
78
2.3
79
86
1
220
27
30
21
20
1.98
50498179--50498263
39
2.2
39
86
0
116
27
31
17
23
1.97
50500740--50500961
48
4.6
48
81
5
243
27
27
18
26
1.98
50500741--50500961
96
2.3
96
86
1
291
27
27
19
26
1.99
50507607--50507793
48
3.9
48
85
2
196
27
29
16
26
1.97
50509840--50509902
24
2.6
24
97
0
117
30
31
15
22
1.95
50510251--50510299
20
2.4
21
80
13
57
20
8
0
71
1.11
50516660--50516819
24
6.6
24
80
7
110
27
31
14
26
1.95
50516684--50516819
24
5.6
24
82
1
119
27
31
14
25
1.95
50517169--50517207
12
3.3
12
82
3
53
10
7
0
82
0.86
50532596--50532711
42
2.7
42
86
4
153
31
24
14
30
1.95
50539113--50539339
101
2.2
101
86
2
312
33
25
15
25
1.95
50544183--50544276
37
2.6
37
73
11
86
37
12
11
38
1.80
50549057--50549093
16
2.3
17
86
9
51
59
0
35
5
1.20
50555251--50555279
3
9.7
3
100
0
58
68
31
0
0
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50568248--50568447
40
5.0
40
90
2
287
22
23
28
26
1.99
50572018--50572061
18
2.4
19
85
11
56
40
0
0
59
0.98
50572035--50572069
17
1.9
18
88
11
54
40
0
0
60
0.97
50574880--50575007
60
2.1
60
77
5
134
40
4
12
42
1.64
50580974--50580998
13
1.9
13
100
0
50
60
0
0
40
0.97
50581133--50581177
17
2.6
17
83
16
58
71
6
0
22
1.09
50581140--50581191
18
2.9
18
80
11
54
69
7
1
21
1.24
50583805--50584096
47
6.2
47
90
0
449
27
31
8
32
1.87
50583949--50584027
25
3.3
25
69
16
85
32
29
3
34
1.75
50584021--50584165
69
2.1
69
94
0
254
26
31
11
31
1.92
50583974--50584208
116
2.0
116
94
0
407
27
30
10
31
1.90
50584090--50584208
47
2.5
47
97
0
220
26
30
10
32
1.89
50585811--50586036
40
5.7
40
87
5
271
24
21
27
25
1.99
50585885--50586069
80
2.3
80
85
4
232
27
20
27
24
1.99
50587392--50587599
47
4.4
47
92
0
353
28
29
7
34
1.85
50590309--50590367
18
3.3
18
85
0
64
27
18
22
32
1.97
50590683--50590732
21
2.3
21
86
3
64
14
34
36
16
1.88
50592572--50592858
48
6.0
47
77
4
279
25
28
17
28
1.97
50592576--50592858
96
2.9
94
82
4
314
26
28
16
28
1.97
50592573--50592845
144
1.9
144
84
1
368
24
28
17
28
1.97
50607856--50607887
5
6.4
5
96
0
55
78
0
3
18
0.89
50608941--50609006
14
4.8
14
86
3
98
60
12
6
21
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50608933--50609006
27
2.7
27
91
2
112
62
12
6
18
1.51
50619592--50619645
27
2.0
27
85
0
72
40
7
12
38
1.72
50621719--50621754
14
2.6
14
100
0
72
27
55
16
0
1.42
50629798--50629823
12
2.2
12
100
0
52
23
42
7
26
1.81
50647777--50647850
37
2.0
37
97
0
139
35
1
13
50
1.50
50650148--50650416
39
6.9
39
91
0
439
21
25
29
23
1.99
50653177--50653311
43
3.1
44
81
6
166
25
16
28
29
1.97
50653201--50653311
45
2.5
43
81
7
134
27
15
27
28
1.96
50653581--50653854
38
7.2
38
88
1
345
21
21
25
32
1.98
50653608--50653854
114
2.2
114
90
0
386
20
21
25
33
1.97
50653847--50653976
45
2.9
45
88
2
190
22
22
27
27
1.99
50665604--50665773
43
4.0
41
72
13
128
35
22
14
26
1.93
50673203--50673372
43
4.0
43
77
13
156
31
27
16
25
1.96
50673211--50673369
86
1.9
84
82
13
202
31
26
16
25
1.96
50677920--50677959
19
2.0
20
85
4
55
22
5
0
72
1.04
50680270--50680319
20
2.4
20
80
6
55
26
4
4
66
1.27
50690968--50691016
24
1.9
26
88
12
75
53
8
4
34
1.50
50693580--50693613
17
1.9
18
88
5
52
11
17
0
70
1.16
50696741--50696779
12
3.3
12
85
3
53
84
0
7
7
0.77
50699320--50699404
42
2.0
42
97
0
161
35
16
15
32
1.90
50701769--50701804
18
2.1
19
85
15
51
52
25
0
22
1.47
50702633--50702707
32
2.5
30
82
10
91
36
17
2
44
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50702690--50702739
26
2.0
25
84
11
66
38
14
4
44
1.63
50705400--50705439
20
2.0
21
90
5
64
0
10
2
87
0.63
50705405--50705450
23
2.0
24
86
4
67
4
10
2
82
0.89
50705403--50705450
20
2.4
19
83
10
60
4
10
2
83
0.87
50706606--50706675
8
8.6
8
80
9
79
71
1
2
24
1.08
50706601--50706677
5
14.8
5
73
17
52
72
1
2
23
1.04
50706599--50706678
13
6.4
12
69
22
58
73
1
2
22
1.02
50708060--50708137
33
2.4
33
82
4
95
32
12
19
35
1.89
50729481--50729518
15
2.6
14
88
12
58
7
21
13
57
1.60
50736875--50736914
21
2.0
21
90
5
64
25
27
35
12
1.92
50737046--50737087
14
3.1
14
72
6
50
14
47
21
16
1.82
50738092--50738298
49
4.3
49
76
7
174
23
25
21
29
1.99
50738092--50738358
98
2.8
97
81
6
285
22
27
20
29
1.99
50746589--50746626
19
2.0
20
85
15
53
39
23
0
36
1.55
50746832--50747000
92
1.8
91
96
1
311
28
28
21
21
1.98
50746827--50746996
46
3.7
45
81
11
220
28
28
21
21
1.99
50746829--50747016
46
4.1
46
73
18
151
28
28
20
21
1.98
50747417--50747476
30
2.0
30
90
0
93
30
25
8
36
1.85
50754124--50754161
19
2.0
20
85
15
53
39
23
0
36
1.55
50754383--50754551
46
3.7
45
79
12
211
28
28
20
21
1.98
50754385--50754571
46
4.1
46
72
19
142
28
28
20
21
1.98
50754971--50755030
30
2.0
30
90
0
93
30
25
8
36
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50771432--50771537
45
2.3
46
91
1
178
42
15
21
20
1.89
50772168--50772195
5
5.6
5
100
0
56
21
0
0
78
0.75
50779823--50780085
47
5.6
47
76
10
188
23
30
19
27
1.98
50805168--50805204
19
1.9
19
100
0
74
27
27
13
32
1.94
50805222--50805315
40
2.3
40
100
0
188
27
25
19
27
1.99
50812273--50812599
27
12.1
27
84
1
422
40
19
7
33
1.80
50812291--50812665
27
13.9
27
79
8
176
39
19
8
32
1.81
50812273--50812665
81
4.9
81
84
5
422
39
20
8
32
1.82
50812593--50812719
27
4.7
27
78
3
94
37
22
9
31
1.86
50812703--50812870
27
6.3
27
83
6
198
33
19
21
25
1.97
50813298--50813361
22
2.9
22
75
9
67
21
21
21
34
1.97
50813520--50813621
27
3.8
27
87
5
134
18
23
21
36
1.95
50813781--50813877
6
15.8
6
72
16
74
19
17
15
47
1.83
50813758--50813868
31
3.5
31
91
1
168
18
17
13
50
1.78
50813771--50813893
31
4.0
31
84
3
151
19
17
14
48
1.81
50821362--50821406
19
2.4
18
80
16
56
44
8
4
42
1.56
50822009--50822042
13
2.6
13
90
0
50
55
2
0
41
1.15
50821995--50822058
15
4.1
15
76
7
56
51
1
3
43
1.26
50823817--50823861
19
2.4
19
82
14
58
66
0
0
33
0.92
50826095--50826136
19
2.2
19
83
8
50
28
0
2
69
1.01
50826116--50826158
15
2.8
16
78
7
52
44
0
2
53
1.13
50826120--50826168
24
2.0
24
84
0
62
48
2
2
46
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50826166--50826216
20
2.7
19
85
8
77
39
1
0
58
1.09
50826124--50826217
20
4.6
19
74
19
75
42
2
1
54
1.19
50833091--50833181
42
2.2
42
78
4
94
16
23
13
47
1.81
50850673--50850814
3
48.3
3
73
4
119
30
6
1
61
1.30
50850654--50850817
9
18.2
9
70
8
57
32
5
1
60
1.27
50850691--50850724
17
2.0
17
94
0
59
32
5
0
61
1.20
50852593--50852642
26
1.9
26
83
0
64
44
12
0
44
1.41
50853362--50853390
12
2.3
13
94
5
51
0
10
6
82
0.83
50861078--50861135
25
2.3
24
82
8
62
46
0
3
50
1.18
50860956--50861160
88
2.3
91
90
3
317
45
3
4
46
1.39

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352