Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  193  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63603300--63603620
46
6.7
47
81
13
354
33
9
28
28
1.88
63603288--63603620
99
3.5
97
83
13
394
33
9
28
28
1.88
63607639--63607971
47
7.0
47
83
10
401
30
27
8
33
1.86
63607647--63607971
144
2.3
142
84
10
441
30
28
8
33
1.86
63612407--63612515
39
2.8
39
92
1
184
26
19
25
28
1.99
63615640--63615695
17
3.4
17
74
18
64
32
3
32
32
1.75
63618935--63619381
47
9.6
47
90
5
674
33
8
28
29
1.87
63623881--63623944
33
1.9
33
100
0
128
32
15
18
32
1.93
63631970--63632140
93
1.8
93
91
2
281
28
28
21
21
1.98
63631962--63632135
46
3.8
44
75
11
179
29
28
20
21
1.98
63631967--63632156
46
4.1
46
68
20
119
28
28
20
22
1.98
63638232--63638362
38
3.2
38
72
17
127
30
22
16
29
1.96
63638277--63638405
48
2.7
48
86
1
179
31
21
15
31
1.94
63639191--63639355
84
2.0
84
98
0
321
40
18
18
22
1.91
63644140--63644272
48
2.8
48
83
1
151
32
24
13
29
1.94
63648662--63648698
19
1.9
19
94
0
65
32
21
24
21
1.98
63661243--63661345
29
3.6
28
81
6
109
27
16
27
29
1.97
63664304--63664329
7
3.7
7
100
0
52
0
11
46
42
1.40
63665778--63665889
29
3.9
28
83
6
118
26
13
30
29
1.94
63669916--63669991
32
2.4
32
81
0
89
26
17
27
28
1.97
63681905--63681940
17
2.2
17
90
5
56
11
19
0
69
1.18
63683990--63684153
42
3.9
42
83
4
206
29
17
26
27
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63683990--63684153
85
1.9
84
84
6
215
29
17
26
27
1.97
63699134--63699396
40
6.6
40
87
3
316
26
28
20
24
1.99
63707089--63707351
40
6.6
40
87
3
316
26
28
20
24
1.99
63709944--63710013
35
2.0
35
97
0
131
27
25
21
25
1.99
63715636--63715674
7
5.4
7
87
6
60
41
41
0
17
1.50
63715636--63715674
15
2.7
15
92
4
62
41
41
0
17
1.50
63722509--63722767
47
5.6
47
76
14
293
28
27
18
24
1.98
63722462--63722819
93
3.8
93
95
0
626
29
27
19
24
1.98
63722463--63722816
46
7.6
45
74
14
294
29
27
19
24
1.98
63725199--63725248
15
3.4
15
86
2
66
62
12
16
10
1.55
63725199--63725257
15
4.0
15
76
10
59
59
15
15
10
1.61
63740518--63740635
61
1.9
61
96
0
218
34
28
11
24
1.91
63743823--63743914
21
4.4
21
95
0
166
15
30
39
15
1.88
63744895--63744933
19
2.1
19
95
0
69
12
28
35
23
1.91
63746744--63746803
31
2.0
29
90
6
93
23
25
16
35
1.95
63757097--63757166
28
2.5
28
90
4
106
32
27
12
27
1.93
63762203--63762324
44
2.7
47
79
6
135
27
27
19
26
1.99
63765464--63765577
57
2.0
57
98
0
219
23
26
20
29
1.99
63767264--63767349
43
2.0
43
95
0
154
36
24
20
18
1.95
63769704--63770054
94
3.7
93
78
8
320
23
29
20
26
1.99
63769704--63770066
47
7.7
47
73
13
212
23
29
20
26
1.98
63773093--63773146
21
2.6
21
87
0
72
38
18
18
24
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63779965--63780157
75
2.6
75
93
0
323
11
45
8
34
1.70
63780169--63780227
20
3.3
20
71
28
69
0
44
0
55
0.99
63780175--63780207
13
2.6
13
90
4
50
0
42
0
57
0.98
63780166--63780309
33
4.4
32
72
11
105
2
45
0
51
1.18
63780166--63780303
66
2.1
66
82
5
163
2
45
0
51
1.18
63781206--63781244
20
2.1
18
85
9
51
61
0
0
38
0.96
63781226--63781276
27
1.9
27
88
4
77
47
1
0
50
1.12
63781210--63781431
95
2.3
98
81
9
276
45
2
0
51
1.19
63781171--63781325
61
2.8
55
73
19
151
43
0
1
54
1.13
63781390--63781437
16
2.9
16
73
14
53
45
0
0
54
0.99
63781387--63781467
34
2.4
34
81
8
85
44
0
0
55
0.99
63781456--63781492
16
2.3
17
86
13
60
62
0
0
37
0.96
63782292--63782328
15
2.5
15
95
0
65
29
13
0
56
1.37
63782585--63782612
8
3.5
8
100
0
56
10
0
0
89
0.49
63789372--63789404
14
2.4
14
94
0
57
24
9
15
51
1.72
63789966--63790017
26
2.0
26
85
7
70
44
7
13
34
1.72
63790406--63790480
34
2.2
35
84
13
95
46
0
4
49
1.20
63790511--63790560
26
2.0
26
88
4
75
52
6
0
42
1.26
63790791--63790825
16
2.2
16
89
0
52
42
2
25
28
1.69
63791451--63791540
27
3.2
27
73
17
83
38
11
5
44
1.63
63792133--63792183
25
2.0
25
92
0
84
37
17
5
39
1.74
63794493--63794716
104
2.2
104
93
1
378
17
19
31
31
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63794635--63794786
71
2.1
72
92
1
252
23
17
29
30
1.97
63802128--63802178
26
2.0
26
96
0
93
11
23
35
29
1.90
63802050--63802271
103
2.2
103
93
1
374
18
18
31
31
1.95
63802191--63802341
71
2.1
72
91
2
243
23
16
29
30
1.96
63807114--63807164
25
2.0
25
92
0
84
37
17
5
39
1.74
63808248--63808344
30
3.2
30
85
2
122
34
29
6
29
1.82
63808652--63808891
133
1.8
129
89
5
374
57
15
12
15
1.65
63808654--63808920
133
2.1
130
85
5
362
56
14
13
15
1.68
63809702--63809765
16
4.4
16
68
22
50
34
1
26
37
1.66
63809705--63809772
21
3.2
21
67
29
63
36
1
26
35
1.66
63809702--63809786
42
2.0
42
100
0
170
35
2
25
36
1.69
63809718--63809790
16
4.9
16
68
21
52
36
2
26
34
1.71
63809718--63809786
21
3.3
21
67
28
65
36
2
24
36
1.71
63810465--63810491
14
1.9
14
100
0
54
74
7
3
14
1.18
63810863--63810922
28
2.1
30
81
12
72
46
1
1
50
1.21
63813359--63813391
15
2.1
16
94
5
59
66
0
27
6
1.15
63818642--63818736
19
5.0
19
89
7
149
38
10
14
35
1.81
63818658--63818695
17
2.5
15
80
19
51
39
10
15
34
1.82
63818644--63818736
36
2.5
37
89
8
143
38
10
15
35
1.82
63820480--63820527
24
2.0
24
100
0
96
41
8
4
45
1.53
63826540--63826959
209
2.0
208
88
5
625
27
11
15
45
1.80
63838281--63838310
9
3.3
9
95
0
51
50
0
23
26
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63839965--63840002
19
2.0
19
85
10
51
13
13
21
52
1.73
63852595--63852770
46
3.8
46
79
12
198
19
19
30
30
1.97
63852592--63852763
93
1.8
93
92
0
290
20
20
30
29
1.97
63864538--63864761
40
5.6
40
84
8
267
26
25
23
24
2.00
63864538--63864761
83
2.8
80
86
5
292
26
25
23
24
2.00
63872698--63872773
40
1.9
40
83
0
98
17
11
32
38
1.86
63873328--63873430
37
2.9
34
80
8
116
33
7
16
42
1.77
63877454--63877533
37
2.2
37
84
4
108
27
30
17
25
1.97
63877652--63878156
47
10.7
47
95
0
868
28
29
8
32
1.87
63883921--63884012
42
2.2
42
83
9
116
31
26
18
23
1.97
63885593--63885626
11
2.9
12
86
8
52
55
8
32
2
1.45
63889404--63889433
12
2.5
12
94
0
51
23
26
46
3
1.68
63890592--63890997
140
2.9
138
91
1
643
44
4
8
42
1.55
63890592--63891014
138
3.1
137
89
2
639
44
4
8
42
1.54
63894331--63894383
27
1.9
27
84
3
70
41
13
11
33
1.80
63894340--63894438
27
3.7
27
83
5
103
40
18
11
30
1.85
63894340--63894446
54
2.0
54
81
7
128
38
19
11
30
1.87
63894435--63894618
27
6.8
27
86
2
217
29
25
8
37
1.84
63894611--63894788
53
3.3
53
81
10
211
41
19
7
31
1.80
63894597--63894870
80
3.4
79
80
7
248
40
19
8
31
1.82
63894597--63894795
27
7.4
26
78
12
188
39
20
8
32
1.81
63894659--63894872
54
3.9
54
77
9
154
40
18
8
32
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63894827--63894878
27
1.9
27
88
7
79
38
11
13
36
1.81
63894932--63895022
27
3.4
27
86
3
112
34
17
26
21
1.96
63896264--63896325
20
3.1
20
92
0
106
35
14
19
30
1.92
63896381--63896523
25
5.8
25
92
2
229
27
21
23
27
1.99
63896381--63896551
50
3.5
49
88
5
240
28
21
23
26
1.99
63896380--63896550
25
7.0
23
85
8
200
28
21
23
26
1.99
63896740--63896798
31
1.9
31
92
0
100
32
16
25
25
1.97
63900474--63900726
68
3.9
64
77
10
183
24
29
16
29
1.97
63909047--63909196
23
6.3
24
75
13
116
22
22
21
34
1.97
63911810--63911836
12
2.2
12
100
0
54
51
7
0
40
1.30

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352