Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  324  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104921875--104921916
21
2.0
22
86
13
61
73
0
2
23
0.94
104925503--104925561
30
1.9
31
86
3
84
44
3
23
28
1.70
104925817--104925850
11
3.2
10
88
12
50
29
0
0
70
0.87
104927496--104927633
40
3.5
40
85
0
186
31
12
19
36
1.89
104929062--104929124
17
3.6
17
71
14
56
34
4
0
60
1.18
104929101--104929149
18
2.7
19
73
23
52
38
0
2
59
1.09
104929091--104929160
25
2.8
26
78
10
74
40
1
2
55
1.23
104929138--104929190
20
2.4
23
75
12
67
33
1
9
54
1.43
104933451--104933497
10
4.7
10
78
19
53
48
2
0
48
1.13
104935089--104935149
15
4.1
14
78
21
54
65
1
4
27
1.22
104935092--104935151
24
2.4
24
81
13
68
65
1
5
28
1.23
104937444--104937473
15
2.0
15
100
0
60
66
0
0
33
0.92
104944741--104944830
27
3.2
28
75
7
85
33
23
23
20
1.97
104944936--104944997
28
2.2
28
91
0
97
30
9
29
30
1.89
104948439--104948477
17
2.2
18
86
9
53
74
7
5
12
1.20
104948599--104948666
33
2.0
34
82
8
84
39
0
57
2
1.14
104954011--104954041
12
2.6
12
94
0
53
74
0
25
0
0.82
104957897--104958032
41
3.3
41
86
4
177
37
22
19
20
1.94
104958037--104958167
47
2.8
45
84
13
174
49
30
0
19
1.49
104966737--104966776
20
2.0
20
85
5
53
70
10
0
20
1.16
104967073--104967128
23
2.5
24
85
8
73
39
1
19
39
1.62
104969631--104969675
22
2.0
22
91
8
74
46
8
20
24
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104971590--104971635
21
2.2
22
88
7
69
21
36
19
21
1.95
104976030--104976154
43
2.9
44
86
4
182
31
24
11
33
1.90
104976291--104976329
20
2.0
20
84
0
51
48
2
2
46
1.29
104976333--104976380
20
2.4
20
86
10
71
33
0
2
64
1.05
104990258--104990377
24
5.0
24
89
3
179
27
20
21
30
1.98
104990427--104990493
20
3.3
20
85
0
98
32
20
11
34
1.90
104990427--104990483
11
5.5
11
70
16
50
33
19
12
35
1.89
104990530--104990577
25
1.9
25
91
0
78
25
14
25
35
1.94
104992978--104993021
19
2.4
18
85
7
54
40
9
0
50
1.34
104995720--104995792
26
2.8
25
81
8
92
41
8
13
36
1.75
104998475--104998629
39
4.0
39
90
0
238
27
23
20
27
1.99
105006742--105006896
39
4.0
39
89
0
229
27
23
20
28
1.99
105009829--105009952
58
2.1
58
83
2
151
36
14
23
25
1.93
105019339--105019396
21
2.7
21
76
10
64
46
25
1
25
1.62
105019509--105019625
54
2.1
54
81
4
137
19
0
32
47
1.50
105019636--105019817
41
4.4
41
84
5
242
22
21
21
34
1.97
105031111--105031163
22
2.4
22
87
3
79
33
16
18
30
1.94
105040979--105041023
18
2.5
18
89
7
65
17
35
22
24
1.95
105043105--105043210
42
2.5
42
84
0
131
15
39
23
21
1.91
105043154--105043418
104
2.5
104
85
1
343
19
31
25
23
1.98
105056596--105056643
24
2.0
23
96
4
87
64
16
2
16
1.39
105057243--105057298
24
2.3
25
82
11
64
51
1
3
42
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105066329--105066414
41
2.1
41
100
0
172
53
6
6
32
1.55
105066991--105067045
16
3.4
16
82
5
67
38
1
0
60
1.08
105073137--105073188
24
2.2
24
92
0
86
28
17
28
25
1.97
105079968--105080009
17
2.6
16
88
7
66
78
2
0
19
0.86
105079958--105080013
29
1.9
29
86
13
80
75
1
0
23
0.90
105081431--105081466
17
2.1
18
89
5
56
72
0
0
27
0.85
105083072--105083101
13
2.3
13
94
0
51
50
6
13
30
1.67
105084589--105084774
59
3.1
58
70
14
189
40
1
6
51
1.37
105084663--105084697
18
2.0
18
94
5
63
42
0
0
57
0.99
105084670--105084715
18
2.8
17
83
9
51
45
0
0
54
0.99
105084682--105084738
26
2.2
25
81
3
69
40
0
3
56
1.17
105084586--105084832
120
2.0
121
95
0
442
40
1
5
52
1.32
105084785--105084820
18
2.0
18
100
0
72
33
0
0
66
0.92
105084789--105084828
18
2.2
18
86
0
53
42
0
0
57
0.98
105084978--105085072
45
2.1
44
86
1
127
34
27
6
31
1.82
105085051--105085120
16
4.4
16
90
0
113
31
35
1
31
1.67
105089597--105089731
67
2.0
67
98
0
261
34
16
15
34
1.90
105093166--105093254
45
2.0
45
100
0
178
35
11
15
37
1.84
105095460--105095497
19
2.1
19
90
5
60
34
0
5
60
1.19
105100162--105100232
35
2.0
35
100
0
142
33
26
16
22
1.96
105106074--105106136
19
3.1
21
67
19
53
52
0
3
44
1.17
105106175--105106209
17
2.1
17
89
5
54
62
0
0
37
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105108021--105108089
33
2.1
34
88
2
104
46
7
10
36
1.65
105108308--105108341
6
5.8
6
89
6
52
44
0
2
52
1.16
105113599--105113660
19
3.3
18
76
12
61
41
1
8
48
1.42
105125773--105125839
35
1.9
35
87
0
98
43
4
2
49
1.38
105127999--105128037
17
2.3
17
86
8
53
64
7
2
25
1.33
105129901--105130013
43
2.6
44
77
8
122
21
22
21
35
1.96
105129901--105130078
44
4.0
45
76
10
136
21
22
19
35
1.96
105130169--105130325
44
3.6
43
75
13
151
22
18
23
35
1.95
105130207--105130371
88
1.9
87
86
3
233
19
21
23
35
1.96
105142664--105142688
3
8.3
3
100
0
50
68
0
0
32
0.90
105143126--105143164
17
2.3
17
86
8
53
64
7
2
25
1.33
105144374--105144463
30
3.0
29
72
15
76
44
0
15
40
1.47
105145177--105145225
5
10.2
5
78
12
50
18
4
0
77
0.92
105145177--105145225
24
2.0
24
92
7
82
18
4
0
77
0.92
105145181--105145232
24
2.2
24
86
6
70
21
5
0
73
1.04
105145250--105145329
33
2.4
33
85
4
108
40
1
1
57
1.15
105145263--105145305
20
2.1
21
86
4
61
41
2
0
55
1.12
105145316--105145408
8
10.0
9
67
23
50
38
1
3
56
1.22
105145316--105145349
17
2.0
17
88
11
52
44
2
0
52
1.16
105145371--105145416
22
2.1
21
84
11
58
32
0
4
63
1.14
105145401--105145429
14
2.1
14
93
6
51
27
0
3
68
1.05
105145592--105145683
39
2.4
39
94
3
159
63
0
3
33
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105145610--105145685
21
3.7
21
72
12
77
57
0
2
39
1.12
105145559--105145655
18
5.2
18
66
11
52
70
2
4
23
1.16
105145775--105145829
13
4.3
12
82
15
58
78
3
1
16
0.98
105145789--105145837
16
2.9
16
85
11
55
79
2
2
16
0.92
105145787--105145853
24
2.8
24
82
8
66
79
2
2
14
0.98
105146132--105146179
8
6.4
8
79
11
57
58
0
0
41
0.98
105146141--105146194
21
2.6
21
91
5
83
59
1
0
38
1.08
105146173--105146253
13
6.7
13
72
22
52
55
3
0
40
1.17
105146184--105146255
22
3.2
21
78
14
72
52
4
0
43
1.20
105146175--105146247
24
3.1
24
72
20
73
56
2
0
41
1.14
105146265--105146312
5
10.2
5
80
15
50
77
2
0
20
0.88
105146265--105146315
18
2.8
18
84
3
75
76
1
0
21
0.88
105146274--105146315
14
3.1
14
86
13
61
78
2
0
19
0.86
105146265--105146321
18
3.1
17
78
12
60
75
1
1
21
0.98
105146318--105146355
20
1.9
20
84
10
51
81
2
10
5
0.94
105148287--105148352
19
3.2
21
87
6
64
36
19
9
34
1.84
105148304--105148418
19
6.2
19
93
6
184
35
15
10
38
1.82
105148304--105148412
53
2.0
56
92
7
188
35
14
11
38
1.82
105148305--105148432
53
2.4
53
84
15
174
35
14
10
39
1.80
105149729--105149753
2
12.5
2
100
0
50
48
0
0
52
1.00
105150247--105150282
17
2.1
17
90
10
56
61
5
0
33
1.19
105152619--105152666
21
2.3
21
88
0
69
33
16
31
18
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105160653--105160808
40
4.0
40
86
3
199
33
31
18
16
1.93
105160653--105160987
38
8.4
38
71
12
174
34
29
18
17
1.94
105160653--105160825
78
2.2
80
84
2
215
33
31
18
16
1.93
105160754--105160934
62
2.9
62
88
3
283
33
28
19
18
1.96
105160792--105160898
24
4.9
24
68
21
99
35
28
16
19
1.94
105160860--105160909
24
2.2
24
89
7
77
34
28
20
18
1.95
105162589--105162629
2
20.5
2
84
0
55
2
2
41
53
1.27
105167241--105167334
27
3.4
27
67
16
68
32
22
14
29
1.94
105167302--105167423
55
2.2
56
85
1
165
36
22
15
24
1.93
105171616--105171667
25
2.0
26
85
10
72
38
0
21
40
1.53

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352