Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  105  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33534679--33534790
55
2.0
55
98
0
215
33
15
10
41
1.81
33540160--33540190
15
2.1
15
100
0
62
22
19
12
45
1.84
33543273--33543304
15
2.1
15
100
0
64
43
21
18
15
1.87
33544020--33544060
22
1.9
22
90
5
66
17
26
43
12
1.84
33546215--33546290
30
2.5
30
75
12
82
25
1
6
67
1.23
33546329--33546569
54
4.6
54
72
13
180
31
6
3
58
1.39
33546313--33546569
26
9.8
26
71
9
155
32
6
3
58
1.39
33546518--33546571
28
1.9
28
84
0
72
33
7
0
59
1.25
33551634--33551672
19
2.1
19
90
0
60
30
20
5
43
1.73
33556133--33556164
12
2.7
12
100
0
64
37
34
6
21
1.79
33558980--33559034
27
2.0
27
100
0
110
36
7
27
29
1.84
33559720--33559787
34
2.0
34
100
0
136
29
17
23
29
1.97
33560413--33560586
46
3.7
46
79
11
210
21
21
27
29
1.99
33560410--33560581
94
1.8
93
93
1
299
21
21
28
28
1.99
33567267--33567436
46
3.7
46
78
10
193
22
18
27
30
1.98
33567261--33567431
93
1.8
93
91
0
279
22
19
28
30
1.98
33569403--33569845
44
10.1
44
72
4
241
32
19
20
27
1.97
33569401--33569609
89
2.4
88
80
0
229
31
21
22
25
1.98
33569400--33569730
133
2.5
133
80
3
337
29
20
22
27
1.98
33571409--33571487
25
3.0
25
77
10
95
24
3
7
64
1.36
33571519--33571635
55
2.1
54
88
1
171
31
4
2
61
1.29
33571411--33571836
26
16.0
26
68
10
175
30
5
4
58
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33571838--33571881
22
2.2
20
84
12
54
27
4
4
63
1.33
33577748--33577821
28
2.6
28
89
2
112
28
31
13
27
1.94
33580347--33580451
52
2.0
51
80
5
113
32
13
3
50
1.59
33584313--33584387
34
2.3
34
81
4
100
32
24
18
25
1.97
33588306--33588337
6
5.7
6
92
7
50
0
15
0
84
0.63
33595306--33595343
18
2.1
18
90
0
58
15
15
0
68
1.22
33597755--33597825
31
2.3
31
92
2
115
46
15
9
28
1.77
33600063--33600128
23
3.0
23
70
18
61
56
1
0
42
1.08
33609805--33610453
325
2.0
325
97
0
1226
35
20
12
30
1.90
33611402--33611637
50
4.7
50
83
4
314
30
27
17
24
1.97
33611399--33611680
150
1.9
150
88
2
433
31
27
17
23
1.96
33614268--33614300
17
2.0
17
88
5
50
48
6
3
42
1.43
33624024--33624058
3
11.7
3
100
0
70
31
0
0
68
0.90
33624059--33624244
73
2.5
73
96
0
345
29
6
23
40
1.79
33628484--33628669
73
2.5
73
98
0
354
28
6
24
40
1.79
33629703--33629742
22
1.9
21
85
10
55
35
15
32
17
1.91
33635220--33635279
3
20.0
3
77
13
61
68
0
31
0
0.90
33635219--33635269
18
3.1
16
86
13
68
68
0
31
0
0.90
33635223--33635279
16
3.4
17
81
13
73
68
0
31
0
0.90
33635841--33636513
145
4.9
134
75
14
476
56
6
8
29
1.54
33636114--33636173
29
2.1
29
84
6
77
65
3
5
26
1.29
33636243--33636278
12
2.8
13
87
4
56
75
0
2
22
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33636175--33637025
156
5.7
153
83
11
906
55
7
7
29
1.54
33635977--33637025
300
3.6
293
85
9
1297
56
6
7
29
1.53
33644278--33644336
26
2.4
24
86
8
75
42
11
6
38
1.68
33644434--33644520
17
5.2
17
73
13
65
1
32
0
66
0.99
33644434--33644491
13
3.6
17
75
25
56
0
31
0
68
0.89
33644454--33644499
19
2.4
19
82
7
58
0
34
0
65
0.93
33645347--33645389
21
2.1
20
86
4
59
39
0
6
53
1.28
33646595--33646620
3
8.7
3
100
0
52
30
0
0
69
0.89
33664136--33664177
22
1.9
22
90
9
68
2
28
0
69
1.01
33664740--33664782
17
2.5
18
81
11
54
25
0
2
72
0.97
33669045--33669155
27
4.1
26
78
13
118
19
23
22
34
1.97
33669039--33669147
54
2.0
54
92
1
184
20
24
21
33
1.97
33669052--33669173
27
4.5
26
81
11
113
21
24
19
34
1.96
33669147--33669196
21
2.4
21
96
0
91
22
26
20
32
1.98
33672776--33672800
12
2.1
12
100
0
50
68
0
0
32
0.90
33675029--33675080
18
2.7
19
88
5
70
53
3
7
34
1.48
33675163--33675200
6
6.5
6
81
6
51
65
0
21
13
1.26
33675453--33675499
24
2.0
24
84
16
62
31
0
17
51
1.46
33676773--33676819
19
2.5
20
80
16
55
46
0
29
23
1.52
33690425--33690468
23
2.0
22
86
4
61
43
11
4
40
1.61
33690924--33690975
18
2.7
19
88
5
70
53
3
7
34
1.48
33690998--33691051
5
10.8
5
95
0
90
37
0
3
59
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33691064--33691104
18
2.3
18
87
8
57
73
0
12
14
1.11
33691118--33691163
21
2.2
21
84
7
58
76
0
23
0
0.79
33691071--33691146
37
2.0
40
82
12
97
71
1
19
7
1.18
33691118--33691162
22
2.1
21
83
4
54
77
0
22
0
0.76
33691370--33691416
24
2.0
24
84
16
62
34
2
14
48
1.56
33691581--33691709
37
3.3
40
71
14
115
26
13
24
35
1.93
33696958--33697008
24
2.2
22
77
12
57
50
25
7
15
1.71
33699511--33699544
17
2.0
17
100
0
68
52
5
23
17
1.66
33700299--33700430
66
2.0
66
96
0
246
34
3
20
41
1.68
33701364--33701474
47
2.4
47
87
0
150
20
18
29
31
1.96
33711582--33711620
19
2.1
19
85
4
53
23
17
5
53
1.63
33720226--33720272
22
2.1
23
92
4
78
65
0
4
29
1.11
33720889--33721058
89
1.9
90
80
6
202
38
12
8
40
1.74
33721183--33721233
19
2.7
19
78
9
59
66
1
0
31
1.03
33721184--33721314
18
6.9
19
72
12
83
65
1
3
29
1.16
33721226--33721303
9
8.4
9
72
10
50
69
1
3
25
1.13
33721214--33721323
56
1.9
58
83
3
143
66
0
5
27
1.19
33722930--33722956
14
1.9
14
100
0
54
33
0
0
66
0.92
33723287--33723323
3
12.3
3
100
0
74
0
32
0
67
0.91
33724338--33724368
3
10.3
3
92
0
53
35
0
0
64
0.94
33728157--33728199
21
2.0
21
100
0
86
32
23
11
32
1.90
33730702--33730794
48
1.9
48
93
0
159
30
5
12
51
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33731161--33731235
33
2.3
33
83
0
96
32
5
44
18
1.72
33733681--33733751
16
4.4
16
67
12
56
66
12
0
21
1.25
33734054--33734108
26
2.1
27
89
3
85
5
23
5
65
1.35
33734925--33734973
23
2.1
23
88
0
71
12
16
20
51
1.76
33735159--33735395
43
5.5
43
83
4
307
26
18
29
25
1.98
33735160--33735396
87
2.7
86
87
4
327
26
18
29
25
1.98
33735131--33735398
130
2.1
130
86
4
371
26
17
29
25
1.98
33735513--33735609
31
3.1
31
93
0
158
55
21
8
14
1.65
33735839--33735935
31
3.1
31
93
0
167
57
20
7
14
1.60
33735454--33736105
326
2.0
326
98
0
1259
48
17
9
24
1.77
33736189--33736236
21
2.3
21
88
0
69
2
35
20
41
1.64
33736197--33736247
21
2.4
21
83
6
59
3
39
17
39
1.68
33739995--33740020
12
2.2
12
100
0
52
30
26
0
42
1.56
33741739--33741860
9
13.7
9
71
13
74
36
1
16
45
1.57
33745480--33745735
120
2.1
120
95
0
458
22
18
21
37
1.94
33747770--33747830
10
5.0
13
71
28
62
21
16
32
29
1.95
33747768--33747830
24
2.6
24
100
0
126
20
17
33
28
1.95
33753664--33754197
266
2.0
266
99
0
1059
39
9
18
31
1.83
33754202--33754242
21
1.9
22
90
5
66
75
0
9
14
1.04
33758434--33758459
6
4.3
6
100
0
52
84
0
0
15
0.62
33761072--33761244
49
3.5
49
97
0
328
25
17
27
29
1.97
33763555--33763583
13
2.1
14
93
6
51
44
3
0
51
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33763540--33763636
39
2.8
33
76
19
101
41
4
4
50
1.40
33768094--33768137
22
2.0
22
86
0
61
52
0
0
47
1.00
33768154--33768209
19
3.2
19
70
14
57
48
1
0
50
1.11
33768160--33768207
15
2.9
15
77
17
51
54
2
0
43
1.12
33768366--33768403
13
2.7
14
84
12
51
36
10
7
44
1.68
33768366--33768406
14
3.0
13
89
7
55
36
12
9
41
1.76
33771537--33771568
3
10.7
3
93
0
55
37
0
62
0
0.95
33772578--33772603
3
8.7
3
100
0
52
0
30
0
69
0.89
33772766--33772816
23
2.2
23
82
6
59
49
1
1
47
1.24
33773959--33773998
18
2.2
18
86
0
53
42
5
2
50
1.37

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352