Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  97  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30688495--30688668
76
2.3
76
85
2
242
35
22
19
21
1.96
30690310--30690391
39
2.1
40
86
2
112
23
23
17
36
1.94
30706635--30706690
29
1.9
29
85
0
76
41
21
16
21
1.90
30714518--30714594
28
2.8
28
80
4
93
28
29
10
31
1.90
30716932--30716960
14
2.0
15
93
6
51
48
6
3
41
1.47
30723725--30723763
13
3.0
13
84
0
51
28
28
35
7
1.85
30732727--30732936
104
2.0
104
100
0
420
25
16
24
34
1.95
30734107--30734144
6
6.3
6
87
0
58
50
13
15
21
1.78
30734107--30734150
18
2.4
18
88
0
61
47
13
15
22
1.81
30735032--30735068
14
2.6
15
83
12
51
37
5
0
56
1.22
30735034--30735096
21
3.1
21
77
8
60
39
4
0
55
1.21
30737238--30737275
19
2.0
19
100
0
76
21
26
26
26
1.99
30737930--30737990
29
2.1
30
84
9
81
50
4
13
31
1.62
30737930--30737990
30
2.1
29
84
9
79
50
4
13
31
1.62
30741583--30741614
14
2.3
14
94
0
55
34
34
9
21
1.86
30749597--30749640
19
2.3
19
88
0
61
61
27
0
11
1.30
30749712--30750104
211
1.9
210
90
1
635
55
20
5
18
1.62
30752489--30752555
30
2.2
30
94
0
116
55
5
5
32
1.49
30754713--30754749
9
4.1
9
89
0
56
27
10
13
48
1.75
30754713--30754749
18
2.1
18
94
0
65
27
10
13
48
1.75
30754790--30754835
9
5.0
9
89
2
56
30
15
15
39
1.88
30766256--30766325
27
2.5
30
81
9
76
30
22
15
31
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30766864--30766968
38
2.8
38
80
2
122
21
21
21
34
1.97
30769472--30769506
18
1.9
18
88
0
52
40
17
25
17
1.90
30769490--30769596
45
2.4
45
89
6
155
41
18
18
21
1.91
30771191--30771230
20
2.0
20
90
9
64
55
5
0
40
1.22
30771206--30771239
17
2.0
17
88
11
52
55
2
0
41
1.15
30771930--30772146
46
4.7
45
78
12
167
23
29
20
27
1.99
30771930--30772101
46
3.7
46
81
9
176
23
30
20
26
1.98
30775640--30775677
20
1.9
19
89
5
58
44
5
10
39
1.61
30783249--30783280
13
2.3
15
89
10
50
40
0
12
46
1.42
30783647--30783700
19
2.6
21
77
17
58
31
0
12
55
1.38
30783808--30783853
24
1.9
24
81
0
56
28
21
26
23
1.99
30784547--30784598
21
2.5
20
75
6
50
30
13
25
30
1.94
30800190--30800236
19
2.4
20
82
13
62
63
4
4
27
1.31
30800856--30800901
22
2.1
22
84
8
58
52
0
0
47
1.00
30800854--30800903
21
2.3
21
77
12
57
52
0
0
48
1.00
30800858--30800942
8
11.8
8
67
18
53
54
0
0
45
1.00
30800861--30800936
15
4.9
15
74
13
64
55
0
0
44
0.99
30808980--30809019
14
2.9
14
92
7
64
57
0
0
42
0.98
30809312--30809368
28
2.0
28
81
18
66
49
7
3
40
1.47
30813659--30813699
13
3.1
14
86
6
50
17
2
7
73
1.17
30818525--30818561
16
2.3
16
95
0
65
37
5
32
24
1.78
30818541--30818631
46
2.0
46
93
4
159
26
4
30
38
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30818541--30818647
46
2.5
44
83
11
134
28
3
29
37
1.75
30818790--30818828
17
2.5
15
84
15
60
61
0
0
38
0.96
30818795--30818828
17
2.0
17
100
0
68
58
0
0
41
0.98
30818912--30818945
17
2.0
17
100
0
68
58
0
0
41
0.98
30818775--30819179
117
3.5
117
95
0
720
52
3
2
41
1.31
30819024--30819062
17
2.5
15
84
15
60
61
0
0
38
0.96
30819029--30819062
17
2.0
17
100
0
68
58
0
0
41
0.98
30819095--30819134
20
2.0
21
85
5
55
60
5
0
35
1.19
30819146--30819179
17
2.0
17
94
0
59
55
2
0
41
1.15
30819155--30819244
23
3.9
22
72
18
67
53
5
0
41
1.24
30819195--30819258
32
2.0
32
81
0
74
48
3
0
48
1.17
30821677--30821735
29
2.0
29
100
0
118
27
10
10
52
1.67
30829901--30829955
6
8.5
6
90
9
74
78
0
3
18
0.90
30829897--30829955
7
8.9
7
90
3
61
77
0
3
18
0.90
30829896--30829980
30
3.1
27
79
19
79
74
3
3
18
1.11
30837912--30837945
16
2.1
16
88
0
50
38
23
2
35
1.70
30842082--30842149
30
2.2
30
78
2
73
25
1
8
64
1.30
30842121--30842160
11
3.4
11
81
18
53
25
2
0
72
0.97
30849020--30849058
17
2.3
17
86
0
51
74
10
5
10
1.21
30850288--30850330
13
3.4
12
83
6
50
51
0
0
48
1.00
30851001--30851114
57
2.0
57
100
0
228
19
7
29
43
1.77
30854547--30854581
17
2.1
17
94
0
61
14
11
45
28
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30855336--30856043
352
2.0
352
99
0
1398
28
21
13
37
1.91
30871767--30871808
16
2.6
16
85
11
50
38
4
2
54
1.34
30872682--30872713
3
10.7
3
100
0
64
31
0
0
68
0.90
30873138--30873180
19
2.3
19
84
11
54
18
9
6
65
1.44
30873181--30873214
16
2.1
16
88
0
50
55
2
2
38
1.30
30883659--30883697
20
2.1
18
85
9
51
43
15
2
38
1.60
30884614--30884643
12
2.5
12
94
0
51
6
43
26
23
1.78
30887375--30887436
31
2.0
31
100
0
124
32
25
12
29
1.93
30889434--30889477
21
2.1
21
91
0
70
25
18
6
50
1.71
30890310--30890373
31
2.1
31
90
0
101
26
32
9
31
1.88
30892220--30892249
16
1.9
16
93
6
53
80
0
0
20
0.72
30893773--30893815
10
4.1
10
78
21
52
58
6
0
34
1.25
30893821--30893845
8
3.1
8
100
0
50
48
0
0
52
1.00
30894519--30894550
5
6.6
5
92
7
57
81
0
0
18
0.70
30894520--30894550
9
3.3
9
95
4
53
80
0
0
19
0.71
30898950--30898981
5
6.6
5
92
7
57
81
0
0
18
0.70
30898951--30898981
9
3.3
9
95
4
53
80
0
0
19
0.71
30900853--30900891
16
2.5
15
84
8
51
56
0
0
43
0.99
30902742--30902966
40
5.6
40
82
2
272
23
26
24
25
2.00
30902706--30902966
80
3.3
80
81
3
285
23
26
24
26
2.00
30907279--30907335
28
2.1
27
93
3
96
31
24
8
35
1.86
30916009--30916181
46
3.7
46
76
15
185
22
20
27
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30916006--30916175
93
1.8
93
93
0
295
22
20
28
29
1.98
30918034--30918182
57
2.6
57
76
12
153
28
20
20
30
1.98
30920181--30920320
39
3.6
39
92
0
217
12
24
25
38
1.90
30925363--30925635
130
2.1
129
80
4
298
23
23
13
38
1.91
30929447--30929522
35
2.2
35
95
0
143
30
5
35
28
1.79
30934215--30934269
25
2.2
26
78
21
64
40
5
0
54
1.23
30947571--30947681
22
5.0
22
82
4
125
30
20
24
24
1.99
30947585--30947693
45
2.4
45
83
3
130
33
18
23
24
1.97
30948724--30948798
38
2.0
38
100
0
150
24
37
21
17
1.94
30950259--30950402
50
2.9
50
89
0
216
27
25
21
25
1.99
30953632--30953934
47
6.5
46
73
10
208
24
28
19
27
1.99
30953626--30953934
95
3.3
94
81
10
309
23
28
20
27
1.99
30956400--30956541
50
2.9
50
86
2
189
28
23
20
27
1.99
30961804--30961838
16
2.1
18
89
10
56
37
0
5
57
1.23
30961864--30961901
18
2.1
18
85
9
51
23
5
5
65
1.34
30961972--30962009
18
2.2
17
95
4
67
57
0
0
42
0.98
30972029--30972141
43
2.6
43
88
0
163
25
28
19
26
1.99
30972378--30972463
31
2.8
32
81
10
97
67
2
2
27
1.15
30976610--30977735
496
2.3
493
96
0
2074
42
14
6
35
1.73
30977991--30978093
41
2.5
41
88
0
161
28
28
17
26
1.98
30978079--30978157
41
1.9
41
89
0
122
20
24
22
32
1.97
30985438--30985510
37
2.0
37
83
5
94
35
6
2
54
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30985880--30986198
172
1.8
173
86
2
462
36
10
10
42
1.74
30985842--30986248
172
2.4
173
80
5
461
36
10
10
42
1.73
30989588--30989625
11
3.5
11
85
7
51
44
0
0
55
0.99
30989591--30989627
10
3.7
10
92
0
56
45
0
0
54
1.00
30997587--30997626
21
2.0
20
85
5
53
42
20
0
37
1.52
31015942--31016151
98
2.1
99
87
1
305
41
20
10
26
1.85
31015942--31016151
50
4.2
50
89
2
307
41
20
10
26
1.85
31020827--31020913
40
2.2
40
83
4
104
32
26
17
24
1.97
31022216--31022253
14
2.9
13
81
11
51
57
10
13
18
1.63
31024739--31024772
6
5.5
6
86
6
50
82
0
2
14
0.79

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352