Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  155  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50861078--50861203
47
2.6
49
72
11
123
44
2
3
50
1.31
50861177--50861224
18
2.8
17
81
12
53
50
2
0
47
1.12
50861386--50861446
28
2.2
28
85
5
81
50
3
0
45
1.17
50861393--50861536
47
3.1
46
65
23
113
49
4
2
44
1.33
50861361--50861568
91
2.3
90
90
4
326
46
4
2
46
1.37
50861386--50861528
44
3.2
43
68
16
119
48
3
2
46
1.31
50861411--50861549
47
3.0
47
68
17
137
49
4
2
43
1.34
50868065--50868163
48
2.1
48
98
0
189
37
13
22
27
1.91
50878706--50878730
3
8.3
3
100
0
50
0
32
0
68
0.90
50879372--50879436
19
3.3
19
72
21
62
64
0
3
32
1.09
50881487--50881568
32
2.6
32
80
3
94
51
17
3
28
1.62
50885940--50886017
40
2.0
40
92
0
129
41
8
30
19
1.82
50885926--50886035
40
3.1
34
74
17
100
46
6
32
14
1.70
50886518--50886552
7
4.9
7
86
6
52
71
0
0
28
0.86
50889164--50889315
20
7.6
20
72
10
66
39
19
6
34
1.77
50889203--50889291
40
2.2
41
82
4
101
42
14
6
35
1.72
50889235--50889311
40
1.9
40
84
10
104
42
15
5
36
1.69
50889509--50889567
24
2.4
24
85
5
64
33
20
16
28
1.95
50889521--50889624
24
4.4
25
77
9
94
34
17
21
26
1.95
50889530--50889635
46
2.3
46
80
8
117
35
17
18
27
1.94
50889533--50889656
23
5.4
22
72
11
79
33
16
20
29
1.95
50889559--50889657
46
2.2
46
85
5
130
32
17
21
29
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50893582--50893970
45
8.6
45
78
6
234
44
16
19
20
1.87
50893762--50893965
46
4.5
45
81
2
201
47
14
20
18
1.83
50895819--50895860
20
2.0
21
90
4
68
66
0
2
30
1.04
50895824--50895872
9
5.1
9
80
9
53
71
2
0
26
0.97
50896265--50896399
30
4.7
29
76
16
120
62
4
1
31
1.24
50896265--50896365
29
3.5
30
81
10
115
65
2
1
29
1.18
50896648--50896692
10
4.4
10
83
5
54
31
2
2
64
1.18
50896655--50896753
21
4.5
21
70
19
69
30
5
2
62
1.28
50896754--50896807
27
1.9
29
82
14
69
37
5
0
57
1.22
50897272--50897327
21
2.6
21
85
2
76
50
1
5
42
1.35
50897313--50897364
19
2.8
19
73
2
52
51
0
1
46
1.12
50897331--50897364
17
2.0
17
88
0
50
47
0
2
50
1.16
50900985--50901025
14
2.8
15
82
10
50
34
7
0
58
1.26
50901468--50901506
19
2.1
19
100
0
78
35
5
20
38
1.75
50901699--50901775
38
2.0
38
89
0
118
38
11
22
27
1.88
50908770--50908833
21
3.2
21
67
13
62
34
15
21
28
1.94
50908754--50908833
39
2.1
39
92
0
133
37
15
20
27
1.92
50910301--50910425
48
2.6
48
85
1
151
42
3
2
52
1.30
50923655--50923726
13
5.3
13
79
9
63
33
0
1
65
1.02
50924004--50924038
18
1.9
18
88
0
52
57
0
0
42
0.99
50932524--50932630
26
4.2
26
92
4
173
33
7
22
36
1.82
50932524--50932630
51
2.1
52
94
1
189
33
7
22
36
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50934256--50934393
27
5.1
27
76
10
131
18
21
23
36
1.94
50934253--50934393
54
2.6
53
85
4
185
18
21
22
36
1.95
50936201--50936340
27
5.2
28
87
5
166
34
22
24
18
1.96
50937951--50938060
26
4.2
26
95
2
177
36
24
4
34
1.76
50940100--50940273
49
3.5
48
83
4
240
30
28
16
25
1.96
50940098--50940281
99
1.9
99
96
0
341
29
28
16
25
1.96
50942447--50942613
49
3.4
47
79
13
162
24
31
19
24
1.98
50943915--50943943
14
2.1
14
100
0
58
41
24
6
27
1.80
50943917--50943952
14
2.6
14
90
0
54
47
19
2
30
1.64
50957046--50957115
35
2.0
35
100
0
140
28
17
20
34
1.95
50967153--50967249
40
2.4
40
84
0
113
28
15
19
36
1.93
50967221--50967334
36
3.0
37
81
10
140
24
14
28
32
1.94
50979158--50979195
19
2.0
19
100
0
76
31
5
10
52
1.58
50980850--50980999
73
2.1
73
92
0
246
19
16
31
33
1.93
50986110--50986359
47
5.3
47
90
1
351
32
9
31
27
1.88
50988304--50988490
39
4.6
39
84
11
239
27
31
22
17
1.97
50988374--50988470
48
2.0
48
97
0
185
28
32
22
15
1.95
50998827--50998851
8
3.1
8
100
0
50
52
0
24
24
1.48
50999301--50999382
43
1.9
43
85
5
112
25
19
24
30
1.98
51006868--51007039
43
4.0
43
74
10
172
23
18
25
33
1.96
51009317--51009345
5
5.8
5
100
0
58
82
0
0
17
0.66
51009375--51009400
3
8.7
3
100
0
52
69
0
0
30
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51009493--51009531
16
2.4
16
87
8
53
71
2
2
23
1.10
51012873--51012933
17
3.6
17
70
16
63
75
6
1
16
1.09
51012856--51012928
34
2.1
34
100
0
146
72
5
2
19
1.16
51031423--51031471
25
2.0
25
83
0
62
38
0
16
44
1.48
51031866--51031951
43
2.0
43
93
0
145
52
1
23
23
1.54
51031871--51031935
15
4.4
16
69
25
61
55
0
24
20
1.43
51036086--51036174
24
3.7
24
80
7
101
24
30
15
29
1.96
51036088--51036197
49
2.3
49
81
12
129
26
30
16
27
1.97
51038801--51038897
40
2.4
42
88
6
139
26
16
28
27
1.97
51040032--51040072
20
2.0
21
95
4
75
75
0
24
0
0.80
51042505--51042631
46
2.8
46
87
3
175
42
15
22
19
1.89
51046679--51046718
15
2.7
15
88
7
55
40
10
17
32
1.83
51055533--51055560
14
2.0
14
100
0
56
35
7
7
50
1.57
51056641--51056678
14
2.7
14
91
0
58
39
7
2
50
1.46
51058832--51058871
19
2.1
19
85
4
53
57
0
0
42
0.98
51064811--51065037
48
4.8
48
88
5
318
22
27
21
28
1.99
51081210--51081238
2
15.0
2
92
7
51
48
0
0
51
1.00
51088580--51088610
1
31.0
1
93
0
53
0
3
0
96
0.21
51102317--51102355
20
2.0
20
94
0
69
25
5
0
69
1.09
51106892--51106965
36
2.1
36
97
0
139
39
8
14
37
1.76
51110182--51110221
5
7.6
5
88
5
53
17
2
0
80
0.83
51110182--51110221
16
2.5
15
84
11
53
17
2
0
80
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51113746--51113825
37
2.1
37
97
2
151
21
7
16
55
1.66
51116711--51116790
23
3.5
23
81
6
101
37
21
20
21
1.94
51123617--51123953
176
1.9
177
84
4
459
47
9
12
30
1.73
51124195--51124349
82
1.9
80
82
5
195
36
9
19
34
1.85
51133499--51133582
41
2.0
41
97
0
159
25
9
16
48
1.76
51135900--51136118
68
3.2
68
77
12
216
29
18
15
35
1.93
51141106--51141143
6
6.3
6
93
0
67
47
21
0
31
1.51
51141583--51141633
26
2.1
25
85
10
70
39
23
19
17
1.92
51144212--51145106
49
18.6
49
94
2
1466
32
8
29
29
1.86
51144212--51145106
96
9.3
95
95
1
1429
32
8
29
29
1.86
51145225--51145362
37
3.7
37
97
0
249
24
18
31
25
1.98
51147072--51147157
43
2.0
43
97
0
163
45
11
12
30
1.78
51154896--51154944
23
2.2
21
85
7
62
34
2
2
61
1.19
51156144--51156209
31
2.1
31
86
10
91
27
15
9
48
1.74
51156397--51156457
30
2.0
30
100
0
122
54
9
13
22
1.68
51159686--51159822
40
3.4
39
82
9
152
28
27
16
27
1.97
51159641--51159825
81
2.3
83
80
10
204
31
26
15
25
1.96
51160236--51160290
29
1.9
28
85
3
74
29
21
1
47
1.61
51161341--51161419
37
2.1
37
86
4
106
27
31
16
24
1.96
51161538--51161811
47
5.7
47
91
2
397
28
30
8
32
1.87
51161538--51161790
49
5.3
49
92
2
392
28
30
8
32
1.87
51161538--51161811
96
2.9
96
88
6
396
28
30
8
32
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51167835--51168021
79
2.4
79
88
6
290
24
22
28
24
1.99
51167839--51168021
39
4.6
40
88
6
275
23
22
28
24
1.99
51180095--51180277
40
4.6
40
87
5
264
22
22
29
25
1.99
51185877--51185940
16
3.8
16
78
11
74
17
25
25
32
1.96
51185909--51186092
41
4.5
41
86
4
223
19
20
23
36
1.95
51185876--51186092
82
2.7
76
79
14
222
18
20
24
36
1.95
51187159--51187192
17
2.0
17
88
0
50
14
0
20
64
1.28
51193678--51193901
41
5.5
41
89
4
294
20
19
23
37
1.95
51202693--51202773
43
1.9
43
85
7
112
33
22
17
27
1.96
51202694--51202787
42
2.2
43
81
9
104
31
23
15
28
1.96

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352