Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  337  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108045012--108045037
10
2.6
10
100
0
52
15
19
0
65
1.27
108049949--108050005
30
1.9
30
92
7
98
49
14
10
26
1.75
108050548--108050572
7
3.6
7
100
0
50
0
0
16
84
0.63
108051504--108051577
37
2.0
37
97
0
139
25
13
17
43
1.86
108053479--108053526
21
2.3
21
85
7
62
54
6
0
39
1.26
108057832--108057856
10
2.5
10
100
0
50
40
0
60
0
0.97
108059019--108059051
16
2.0
17
88
5
50
54
3
0
42
1.15
108060256--108060286
16
2.0
16
93
6
55
67
6
0
25
1.14
108060287--108060327
17
2.3
18
87
4
57
39
4
4
51
1.45
108070631--108070831
100
2.0
100
89
1
305
41
9
11
36
1.76
108070882--108070911
15
1.9
16
93
6
53
66
0
3
30
1.07
108073806--108073847
21
2.0
20
86
4
57
26
7
11
54
1.62
108077220--108077326
3
35.0
3
72
12
58
28
8
3
59
1.44
108077299--108077358
18
3.3
18
76
15
52
25
5
3
66
1.27
108077504--108077612
3
36.7
3
72
9
62
31
9
2
56
1.45
108077525--108077595
27
2.6
27
81
0
79
30
12
1
54
1.46
108077591--108077644
17
3.2
16
79
10
54
31
11
1
55
1.45
108078931--108078966
3
12.0
3
100
0
72
66
0
0
33
0.92
108088393--108088443
21
2.4
22
83
3
77
35
0
0
64
0.94
108088396--108088451
24
2.2
27
84
9
73
41
0
0
58
0.98
108089173--108089210
18
2.1
19
90
5
60
47
2
0
50
1.15
108089834--108089892
29
2.1
27
84
6
73
57
10
0
32
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108093993--108094028
18
2.0
18
88
0
54
44
5
13
36
1.68
108094345--108094374
14
2.1
14
93
0
51
53
0
0
46
1.00
108103627--108103671
20
2.2
20
85
11
65
35
0
2
62
1.08
108104177--108104258
41
2.0
41
97
0
155
48
6
4
40
1.49
108105379--108105418
17
2.3
18
80
20
50
47
0
0
52
1.00
108123897--108124241
130
2.7
129
79
7
383
28
18
18
35
1.94
108126339--108126825
163
3.0
161
85
2
636
32
22
19
25
1.98
108127332--108127389
29
2.0
29
100
0
116
27
17
17
37
1.92
108128361--108128411
15
3.5
15
83
5
77
62
1
0
35
1.06
108129761--108129794
16
2.0
17
88
11
52
58
2
5
32
1.37
108130527--108130578
21
2.5
21
87
0
59
40
23
1
34
1.66
108137534--108137573
4
11.0
4
94
5
52
72
0
0
27
0.85
108137534--108137575
12
3.9
11
85
14
61
71
0
0
28
0.86
108137839--108137908
28
2.5
28
81
6
70
30
2
1
65
1.15
108151506--108151571
32
2.1
32
94
0
114
39
16
9
34
1.80
108155055--108155122
16
4.2
16
94
0
118
27
0
36
35
1.58
108155055--108155122
32
2.1
32
100
0
136
27
0
36
35
1.58
108155103--108155212
45
2.6
41
78
9
116
32
5
29
32
1.80
108155346--108155387
15
2.9
15
82
10
52
52
0
0
47
1.00
108155646--108155698
27
2.1
27
82
10
67
43
0
0
56
0.99
108163743--108163808
26
2.6
25
80
4
69
31
1
1
65
1.11
108163799--108163848
21
2.4
22
80
6
59
42
0
6
52
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108163797--108163851
22
2.4
23
79
11
60
41
0
5
52
1.24
108164839--108164872
17
1.9
17
88
5
50
70
8
20
0
1.13
108165288--108165321
18
1.9
17
88
5
50
47
0
20
32
1.51
108165823--108165902
27
2.9
27
80
10
74
23
5
31
40
1.76
108166829--108166867
20
2.0
19
85
5
51
38
23
5
33
1.77
108171382--108171420
20
2.0
19
85
5
51
38
23
5
33
1.77
108173282--108173380
25
3.9
25
90
4
146
36
18
23
22
1.95
108175617--108175717
51
2.0
51
82
0
121
30
11
22
34
1.90
108176634--108176673
21
1.9
21
84
0
53
42
10
22
25
1.84
108176888--108176918
2
15.5
2
100
0
62
51
0
0
48
1.00
108182651--108182728
15
5.2
15
64
11
52
46
7
20
25
1.77
108182647--108182728
30
2.8
29
92
3
128
47
7
20
24
1.75
108187305--108187412
15
7.2
15
69
12
78
44
7
22
25
1.79
108187298--108187412
30
3.8
30
95
0
194
45
6
22
25
1.77
108187353--108187405
17
3.4
17
67
20
51
49
5
18
26
1.70
108188512--108188541
15
1.9
16
93
6
53
50
3
6
40
1.45
108189509--108189575
31
2.2
31
83
0
80
59
17
4
17
1.53
108189835--108189880
21
2.2
21
84
0
56
2
50
19
28
1.60
108195515--108195740
9
24.6
9
73
9
125
38
0
12
48
1.47
108195515--108195739
18
12.7
18
76
10
151
38
0
12
48
1.46
108195491--108195712
114
1.9
114
84
3
295
38
0
12
48
1.47
108195491--108195779
123
2.3
123
73
9
266
38
1
11
49
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108195845--108195901
15
3.8
15
78
17
73
54
0
0
45
0.99
108196078--108196145
24
2.8
24
86
8
102
45
7
19
27
1.76
108196233--108197140
367
2.5
370
97
1
1732
38
10
15
35
1.81
108202107--108202278
17
9.8
16
72
18
94
45
11
12
29
1.78
108202104--108202296
91
2.2
89
83
6
232
44
11
12
31
1.79
108202397--108202540
55
2.7
53
80
3
171
45
12
13
29
1.80
108202105--108202540
18
25.0
18
69
15
204
44
11
13
30
1.80
108202604--108202657
19
2.8
19
88
5
83
16
0
0
83
0.65
108202604--108202656
9
5.7
10
87
12
78
16
0
0
83
0.66
108202684--108202731
15
3.0
16
80
19
64
41
12
14
31
1.83
108204042--108204143
30
3.4
30
83
2
125
43
3
23
29
1.72
108204139--108204176
16
2.4
16
90
0
58
26
0
2
71
1.00
108204418--108205335
54
17.0
54
94
1
1587
37
18
15
29
1.91
108205283--108206131
72
11.7
72
91
3
1256
34
18
16
30
1.93
108205964--108206117
78
1.9
81
93
3
269
31
20
16
31
1.95
108206135--108206309
69
2.5
71
86
4
223
32
20
14
32
1.92
108218019--108218190
17
9.8
16
72
18
94
45
11
12
29
1.78
108218016--108218208
91
2.2
89
83
6
232
44
11
12
31
1.79
108218310--108218454
56
2.7
53
79
4
164
44
12
13
29
1.80
108218017--108218454
18
25.0
18
69
16
190
44
11
13
30
1.80
108218406--108218492
43
2.0
43
84
6
113
48
12
11
27
1.76
108218518--108218570
9
5.7
10
87
12
78
16
0
0
83
0.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108218518--108218570
19
2.8
19
88
5
81
16
0
0
83
0.66
108218597--108218644
15
3.0
16
80
19
64
41
12
14
31
1.83
108219963--108220064
30
3.4
30
83
2
125
43
3
23
29
1.72
108220060--108220096
15
2.4
16
90
4
58
24
0
2
72
0.97
108220359--108220451
28
3.2
28
76
11
84
24
0
26
48
1.51
108220741--108220849
41
2.7
40
84
5
146
27
18
23
30
1.98
108220776--108220917
72
2.0
72
83
8
182
26
16
24
31
1.97
108228498--108228550
10
5.4
10
76
19
58
60
1
11
26
1.41
108234510--108234574
25
2.9
23
80
15
66
66
7
0
26
1.19
108234536--108234574
19
2.0
20
90
5
62
71
7
0
20
1.10
108235421--108235454
16
2.0
17
88
11
52
58
0
0
41
0.98
108236498--108236531
12
2.8
13
86
13
54
29
0
5
64
1.17
108236474--108236560
40
2.1
41
89
2
131
22
1
8
67
1.23
108238515--108238562
25
1.9
25
95
0
87
66
4
0
29
1.10
108239170--108239224
22
2.5
22
80
11
60
32
3
1
61
1.24
108239170--108239237
28
2.3
30
80
16
72
32
4
4
58
1.37
108239183--108239235
22
2.4
21
81
9
52
32
3
3
60
1.32
108239648--108239760
49
2.3
50
73
13
117
35
2
5
56
1.36
108239682--108239732
23
2.3
23
83
6
70
35
1
5
56
1.35
108239716--108239748
15
2.1
15
94
5
57
33
0
0
66
0.92
108239742--108239850
23
4.8
23
72
19
77
34
7
3
54
1.46
108240185--108240238
19
2.8
19
78
13
58
33
1
7
57
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108252488--108252522
5
7.0
5
87
12
54
40
0
0
60
0.97
108255174--108255209
18
2.0
18
100
0
72
11
11
33
44
1.75
108256619--108256679
30
2.0
30
100
0
122
39
19
19
21
1.93
108263101--108263238
68
2.0
69
90
5
217
36
26
10
27
1.88
108264211--108264256
22
2.0
23
87
4
67
50
36
6
6
1.54
108266056--108266084
14
2.0
15
93
6
51
13
13
10
62
1.55
108277151--108277216
20
3.4
19
70
19
55
13
6
18
62
1.51
108286399--108286429
14
2.1
15
94
5
55
25
25
0
48
1.52
108292121--108292175
27
2.0
27
89
0
83
23
18
41
16
1.89
108292359--108292388
15
1.9
16
93
6
53
33
0
0
66
0.92

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352