Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  286  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93399702--93399882
40
4.6
41
75
10
155
26
20
27
25
1.99
93709902--93710210
39
8.0
39
94
2
543
22
30
25
21
1.99
93709902--93710210
77
4.0
78
96
2
552
22
30
25
21
1.99
93709902--93710210
116
2.7
116
95
0
557
22
30
25
21
1.99
93715811--93716122
39
8.1
39
93
2
540
23
29
25
21
1.99
93715803--93716122
77
4.1
78
95
2
558
23
29
25
22
1.99
93721191--93721343
46
3.3
46
74
15
143
30
26
19
22
1.98
93729784--93729849
22
3.0
22
72
14
64
45
22
22
9
1.80
93730303--93730346
22
2.0
22
82
8
54
20
18
6
54
1.66
93730388--93730449
30
2.1
30
93
0
106
27
3
9
59
1.44
93743155--93743193
10
3.8
10
86
6
60
33
17
17
30
1.94
93743155--93743194
21
1.9
21
94
0
71
32
17
17
32
1.93
93743157--93743202
21
2.2
21
88
0
65
36
19
15
28
1.92
93743233--93743283
25
2.0
25
88
0
75
27
19
23
29
1.98
93747852--93747925
27
2.7
27
89
0
112
41
16
16
25
1.88
93749775--93749950
56
3.1
56
98
0
334
46
9
22
22
1.80
93751082--93751258
40
4.4
39
81
4
178
25
22
25
25
2.00
93751077--93751258
79
2.3
81
83
8
221
25
21
26
25
2.00
93757058--93757228
56
3.1
55
91
8
296
46
8
22
22
1.79
93758355--93758539
79
2.3
81
84
7
236
24
22
27
25
2.00
93758356--93758539
40
4.6
40
83
9
216
24
22
27
25
2.00
93758408--93758572
79
2.1
79
84
6
210
26
21
27
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93768740--93768912
46
3.7
46
77
13
201
22
21
27
28
1.99
93768737--93768907
93
1.8
93
94
0
306
22
21
28
27
1.99
93773768--93773962
49
3.9
49
82
4
239
26
18
27
27
1.99
93773770--93773957
100
1.9
100
91
2
306
26
19
26
27
1.99
93777793--93777976
40
4.6
40
84
8
223
25
28
22
23
1.99
93777795--93777977
79
2.3
80
83
7
212
25
27
22
24
2.00
93784269--93784529
46
5.7
46
73
10
189
23
27
19
29
1.98
93784357--93784526
93
1.8
91
87
2
250
22
27
19
31
1.98
93792267--93792318
26
2.0
26
92
0
86
28
9
21
40
1.84
93801913--93802089
27
6.6
27
81
5
196
27
15
28
29
1.96
93801914--93802068
81
1.9
81
88
5
233
27
15
28
29
1.96
93801910--93802089
81
2.2
81
83
3
229
27
15
27
29
1.96
93803612--93803650
21
1.9
20
89
5
60
28
2
23
46
1.65
93807361--93807544
40
4.6
39
77
8
165
27
27
21
23
1.99
93807324--93807544
80
2.8
80
78
7
193
26
27
21
24
1.99
93807364--93807544
80
2.3
80
83
9
210
27
27
21
23
1.99
93816478--93816624
79
1.9
79
90
5
235
25
22
27
24
2.00
93816478--93816647
79
2.2
78
86
7
229
26
22
27
24
2.00
93816478--93816624
40
3.7
40
90
6
237
25
22
27
24
2.00
93824492--93824639
79
1.9
80
87
4
219
26
22
25
25
2.00
93824492--93824639
40
3.7
40
88
5
219
26
22
25
25
2.00
93824492--93824672
79
2.3
79
82
5
215
28
22
24
24
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93839439--93839627
55
3.5
53
73
3
180
23
23
16
37
1.94
93839414--93839563
53
2.8
53
81
2
147
24
23
15
37
1.93
93848958--93849004
23
2.0
23
83
0
58
23
31
8
36
1.85
93854022--93854265
79
3.1
79
81
2
231
22
24
25
27
2.00
93854022--93854325
40
7.7
40
79
4
242
23
24
25
27
2.00
93859590--93859652
24
2.6
24
79
0
72
30
33
15
20
1.94
93863539--93863711
93
1.9
93
91
2
285
21
22
27
27
1.99
93863544--93863718
46
3.8
47
76
13
182
21
22
27
28
1.99
93868336--93868457
22
5.3
22
62
21
61
25
29
11
33
1.91
93868308--93868902
47
12.6
47
93
2
849
27
29
9
33
1.88
93870165--93870343
85
2.1
85
98
0
349
26
27
8
37
1.85
93870794--93870873
15
5.4
14
72
7
52
12
17
12
57
1.65
93873256--93873428
93
1.9
93
87
0
256
21
22
27
28
1.99
93877012--93877071
28
2.1
29
81
9
70
43
3
23
30
1.70
93878536--93878652
41
2.8
43
80
8
134
31
28
17
22
1.97
93880129--93880190
25
2.8
20
74
21
70
29
6
16
48
1.70
93880304--93880458
43
3.6
43
77
6
145
28
16
25
29
1.97
93883481--93883602
48
2.6
47
79
6
122
30
22
17
29
1.97
93883511--93883612
48
2.1
48
88
0
150
29
21
19
29
1.98
93889646--93889724
37
2.1
37
90
0
122
25
31
18
24
1.98
93889843--93890300
47
9.7
47
95
0
792
28
30
8
32
1.87
93893181--93893601
40
10.6
40
89
1
553
25
28
21
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93893185--93893679
40
12.4
40
86
4
255
26
28
21
24
1.99
93893214--93893680
120
3.9
120
85
4
378
26
27
21
24
1.99
93895530--93895607
36
2.1
37
90
2
122
25
30
19
24
1.98
93895725--93896134
47
8.7
47
95
1
698
28
30
8
32
1.87
93895725--93896134
187
2.2
188
93
1
707
28
30
8
32
1.87
93898847--93898881
13
2.6
14
86
13
56
17
5
0
77
0.96
93903225--93903362
68
2.0
68
83
2
170
32
16
22
28
1.96
93905710--93905775
34
1.9
34
96
0
123
22
7
16
53
1.68
93906284--93906341
21
2.8
20
84
10
71
25
3
3
67
1.22
93915893--93916004
43
2.6
43
87
2
145
33
16
18
32
1.93
93919373--93919680
47
6.6
47
90
2
467
28
30
8
32
1.87
93919373--93919671
96
3.2
96
90
2
480
28
30
9
32
1.88
93923248--93923523
40
6.9
40
90
0
410
25
27
22
25
2.00
93923581--93923655
38
2.0
38
84
10
100
22
26
18
32
1.97
93925786--93926138
47
7.6
47
90
4
527
28
29
8
33
1.86
93925786--93926129
143
2.4
143
91
2
536
28
29
8
33
1.87
93925786--93926138
96
3.8
94
89
3
527
28
29
8
33
1.86
93938242--93938296
23
2.3
23
81
6
65
47
0
7
45
1.30
93938570--93938720
75
2.0
75
98
0
293
37
11
17
33
1.87
93942176--93942239
18
3.6
18
82
14
71
68
1
3
26
1.13
93942192--93942243
21
2.6
20
80
14
63
73
1
0
25
0.94
93957558--93957596
22
1.9
21
85
15
55
58
0
7
33
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93958048--93958110
15
4.1
15
80
13
65
68
1
3
26
1.14
93958062--93958112
19
2.7
19
82
8
61
72
1
0
25
0.95
93959073--93959106
11
3.1
11
91
0
50
8
20
58
11
1.59
93961679--93961727
21
2.3
21
80
13
55
53
0
8
38
1.31
93961964--93962012
21
2.5
21
84
15
61
36
12
0
51
1.40
93963315--93963340
3
8.7
3
100
0
52
34
0
0
65
0.93
93963433--93963504
39
1.9
38
83
8
94
40
1
5
52
1.33
93963464--93963532
29
2.4
27
80
17
77
37
2
2
56
1.29
93970554--93970606
18
2.9
18
85
0
61
39
16
7
35
1.78
93970748--93970782
6
5.8
6
86
0
52
45
17
17
20
1.85
93971696--93971722
6
4.5
6
100
0
54
0
14
0
85
0.61
93976859--93976911
18
2.9
18
82
0
61
41
16
7
33
1.77
93977053--93977097
6
7.5
6
89
0
72
46
15
17
20
1.84
93988040--93988079
21
2.0
21
90
5
64
22
27
40
10
1.86
93989309--93989425
49
2.4
49
84
5
130
23
28
19
29
1.98
93994693--93994736
21
2.1
21
86
0
61
25
22
38
13
1.91
93998629--93998851
119
1.9
120
83
8
294
25
26
22
24
2.00
93998610--93998851
40
6.1
40
82
10
273
25
26
22
25
2.00
94002294--94002516
119
1.9
120
85
6
319
25
27
22
24
2.00
94002273--94002516
40
6.1
40
85
6
309
25
27
22
24
2.00
94010399--94010625
39
5.7
40
81
10
227
24
28
22
24
1.99
94010399--94010573
81
2.2
81
84
10
225
24
29
22
24
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94010399--94010625
81
2.8
79
80
10
212
24
28
22
24
1.99
94021453--94021598
39
3.8
37
76
17
138
28
24
21
25
1.99
94026457--94026494
19
2.0
19
100
0
76
47
21
21
10
1.80
94032391--94032613
119
1.9
120
84
6
301
24
27
22
24
2.00
94032370--94032613
40
6.1
40
84
6
291
24
27
22
25
2.00
94046707--94046840
41
3.3
40
73
10
121
22
17
26
33
1.96
94054202--94054577
44
8.5
44
73
3
236
27
18
20
33
1.96
94054012--94054483
44
10.6
44
70
9
206
28
20
19
31
1.97
94054910--94054941
14
2.3
14
94
0
55
40
9
12
37
1.75
94056122--94056372
44
5.7
43
73
7
173
27
21
19
32
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352